FFCP PHASE2:Mm9::chrX:162676716..162676727,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:14758 |HGNC= |MCL_coexpression_id=1780 |TSSclassifier=NA |UniProt=uniprot:P35803 |association_with_transcript=-115b...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=14758 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1780 | |MCL_coexpression_id=1780 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P35803 | ||
|association_with_transcript=-115bp_to_ENSMUST00000112235_5end | |association_with_transcript=-115bp_to_ENSMUST00000112235_5end | ||
|cluster_id=chrX:162676716..162676727,+ | |cluster_id=chrX:162676716..162676727,+ |
Latest revision as of 18:26, 1 October 2015
Short description: | p12@Gpm6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gpm6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1780 |
Association with transcript: | -115bp_to_ENSMUST00000112235_5end |
EntrezGene: | Gpm6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p12@Gpm6b |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 9.61e-17 | 6 |
CNS neuron (sensu Vertebrata) | 1.28e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-12 | 23 |
hippocampal neuron | 3.19e-09 | 3 |
neuron of the ventral spinal cord | 3.19e-09 | 3 |
neuron | 1.24e-08 | 33 |
neuronal stem cell | 1.24e-08 | 33 |
neuroblast | 1.24e-08 | 33 |
electrically signaling cell | 1.24e-08 | 33 |
electrically responsive cell | 3.24e-07 | 39 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
gray matter | 4.94e-35 | 34 |
cerebral cortex | 4.02e-29 | 21 |
cerebral hemisphere | 4.02e-29 | 21 |
pallium | 4.02e-29 | 21 |
brain grey matter | 2.21e-25 | 29 |
regional part of telencephalon | 2.21e-25 | 29 |
telencephalon | 2.21e-25 | 29 |
regional part of cerebral cortex | 2.36e-23 | 17 |
neural tube | 1.75e-22 | 52 |
neural rod | 1.75e-22 | 52 |
Showing 1 to 10 of 47 entries