UBERON:0000465: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000465
|name=material anatomical entity
|namespace=
|def="Anatomical entity that has mass." [CARO:MAH]
|xref=AAO:0010264;;AEO:0000006;;BILA:0000006;;...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:09, 15 June 2012
| Name: | material anatomical entity | ||
|---|---|---|---|
| Definition: | "Anatomical entity that has mass." [CARO:MAH] | ||
| Xrefs: |
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| Alt_id: | UBERON:CARO_0000006-FBbt_00007016-FMA_67165-ZFA_0001487 | ||
| Subset: | upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001062(anatomical entity) |
|---|
Children
| is a: | UBERON:0000061 (anatomical structure),UBERON:0000463 (organism substance),UBERON:0005423 (developing anatomical structure) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10000-101A1 (Clontech Human Universal Reference Total RNA, pool1)
- 10001-101A3 (Clontech Mouse Universal Reference Total RNA, pool1)
- 10002-101A5 (SABiosciences XpressRef Human Universal Total RNA, pool1)
- 10003-101A7 (SABiosciences XpressRef Mouse Universal Total RNA, pool1)
- 10004-101A9 (chicken embryo whole body, day10 (HH37))
- 10006-101B2 (Universal RNA - Dog Normal Tissues Biochain, pool1)
- 10007-101B4 (Universal RNA - Human Normal Tissues Biochain, pool1)
- 10008-101B6 (Universal RNA - Mouse Normal Tissues Biochain, pool1)
- 10009-101B8 (Universal RNA - Rat Normal Tissues Biochain, pool1)
- 10010-101C1 (adipose tissue, adult, pool1)
... further results Mouse (Mus musculus)
- 10000-101A1 (Clontech Human Universal Reference Total RNA, pool1)
- 10001-101A3 (Clontech Mouse Universal Reference Total RNA, pool1)
- 10002-101A5 (SABiosciences XpressRef Human Universal Total RNA, pool1)
- 10003-101A7 (SABiosciences XpressRef Mouse Universal Total RNA, pool1)
- 10004-101A9 (chicken embryo whole body, day10 (HH37))
- 10006-101B2 (Universal RNA - Dog Normal Tissues Biochain, pool1)
- 10007-101B4 (Universal RNA - Human Normal Tissues Biochain, pool1)
- 10008-101B6 (Universal RNA - Mouse Normal Tissues Biochain, pool1)
- 10009-101B8 (Universal RNA - Rat Normal Tissues Biochain, pool1)
- 10010-101C1 (adipose tissue, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000465 (material anatomical entity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
