UBERON:0001601: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001601
|name=extra-ocular muscle
|namespace=
|def="Skeletal muscle derived from cranial mesoderm and controls eye movements." [GO:0002074, Wikipedia:E...") |
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|part_of=UBERON:0003269 | |part_of=UBERON:0003269 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:12, 15 June 2012
| Name: | extra-ocular muscle | ||
|---|---|---|---|
| Definition: | "Skeletal muscle derived from cranial mesoderm and controls eye movements." [GO:0002074, Wikipedia:Extraocular_muscles] | ||
| Xrefs: |
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| Synonyms: |
"extra-ocular skeletal muscle" EXACT [] "extraocular muscle" EXACT [] "extraocular musculature" EXACT [ZFA:0000511] "extraocular skeletal muscle" EXACT [MA:0001271] "extrinsic eye muscle" EXACT [Obol:automatic] "extrinsic muscle of eyeball" EXACT [] "extrinsic ocular muscle" EXACT [EHDAA2:0000482] | ||
| Comments: | TODO - resolve discrepancies in which muscles are considered extra-ocular | ||
| Alt_id: |
UBERON:0006229 UBERON:FMA_49033-MA_0000271 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000078(mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0004277(eye muscle) |
|---|---|
| develops_from: | UBERON:0005280(),UBERON:0006230(extrinsic ocular pre-muscle mass) |
| part_of: | UBERON:0003269(skeletal muscle tissue of eye) |
Children
| is a: | UBERON:0006531 (oculomotor muscle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10300-104H3
- 10328-105B4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001601 (extra-ocular muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
