UBERON:0005256: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0005256
|name=trunk mesenchyme
|namespace=
|def=
|xref=EFO:0003485;;EHDAA:377;;EHDAA2:0002092;;EMAPA:16177;;VHOG:0000281;;ZFA:0000081
|is_a=UBERON:00...") |
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|part_of=UBERON:0002100 | |part_of=UBERON:0002100 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:22, 15 June 2012
| Name: | trunk mesenchyme | ||
|---|---|---|---|
| Xrefs: |
| ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003104(mesenchyme) |
|---|---|
| part_of: | UBERON:0002100(trunk) |
Children
| is a: | UBERON:0002062 (endocardial cushion),UBERON:0009618 (trunk paraxial mesoderm) |
|---|---|
| part of: | UBERON:0003064 (intermediate mesoderm),UBERON:0009618 (trunk paraxial mesoderm) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005256 (trunk mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.85e-34 | FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_297845d3c8a7ff0d0c2af35574649541 | p@chr5:90897694..90897705, + |
| 8.85e-34 | FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_297845d3c8a7ff0d0c2af35574649541 | p@chr5:90897694..90897705, + |
| 1.18e-33 | FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_09a70fcdf3caec4c1d28084971e04180 | p@chr19:25169885..25169900, + |
| 1.18e-33 | FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_09a70fcdf3caec4c1d28084971e04180 | p@chr19:25169885..25169900, + |
| 1.31e-33 | FFCP PHASE1:Mm9::chr10:88996274..88996286,-#_dbc17f98e06f8a0f2b29e3207b463f89 | p4@Nr1h4 |
| 1.31e-33 | FFCP PHASE2:Mm9::chr10:88996274..88996286,-#_dbc17f98e06f8a0f2b29e3207b463f89 | p4@Nr1h4 |
| 2.01e-33 | FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_2034b7dc59e46243961a1ceed4d8c571 | p6@Insc |
| 2.01e-33 | FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_2034b7dc59e46243961a1ceed4d8c571 | p2@uc009nzu.1 |
| 2.01e-33 | FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_2034b7dc59e46243961a1ceed4d8c571 | p6@Insc |
| 2.01e-33 | FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_2034b7dc59e46243961a1ceed4d8c571 | p2@uc009nzu.1 |
| 1.52e-32 | FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_9054f38e81167f62a9894c2c7dcc3913 | p@chr17:12588483..12588503, + |
| 1.52e-32 | FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_9054f38e81167f62a9894c2c7dcc3913 | p@chr17:12588483..12588503, + |
| 2.21e-32 | FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_23acca637a439a19f0fa5129f2bc9a1f | p2@Cyp4f15 |
| 2.21e-32 | FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_23acca637a439a19f0fa5129f2bc9a1f | p2@Cyp4f15 |
| 6.2e-32 | FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_78ca98627505bce798f8bd86fa26c1c0 | p5@Bhmt |
| 6.2e-32 | FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_78ca98627505bce798f8bd86fa26c1c0 | p5@Bhmt |
| 8.94e-32 | FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_adc3f0acb37b1be9376f3c98af7a2148 | p@chr1:162917234..162917248, + |
| 8.94e-32 | FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_adc3f0acb37b1be9376f3c98af7a2148 | p@chr1:162917234..162917248, + |
| 1.01e-31 | FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_5fae3a29782b3aa3c45758f0fff208f4 | p1@Rtp3 |
| 1.01e-31 | FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_5fae3a29782b3aa3c45758f0fff208f4 | p1@Rtp3 |
| 1.34e-31 | FFCP PHASE2:Mm9::chr3:19885632..19885643,+#_3f4377175d2ffc09cd9261b4a7153950 | p@chr3:19885632..19885643, + |
| 1.34e-31 | FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_3f4377175d2ffc09cd9261b4a7153950 | p@chr16:22894900..22894910, + |
| 1.34e-31 | FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr12:105004018..105004046, - |
| 1.34e-31 | FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_3f4377175d2ffc09cd9261b4a7153950 | p@chr16:22894900..22894910, + |
| 1.34e-31 | FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr6:128436166..128436185, - |
| 1.34e-31 | FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr16:22898981..22898988, - |
| 1.34e-31 | FFCP PHASE1:Mm9::chr3:19885632..19885643,+#_3f4377175d2ffc09cd9261b4a7153950 | p@chr3:19885632..19885643, + |
| 1.34e-31 | FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr2:10041210..10041222, - |
| 1.34e-31 | FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr16:22898981..22898988, - |
| 1.34e-31 | FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr12:105004018..105004046, - |
| 1.34e-31 | FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr6:128436166..128436185, - |
| 1.34e-31 | FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_3f4377175d2ffc09cd9261b4a7153950 | p@chr2:10041210..10041222, - |
| 1.51e-31 | FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_edad125854cd0966ac29a460097a3f82 | p@chr13:23928766..23928779, + |
| 1.51e-31 | FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_edad125854cd0966ac29a460097a3f82 | p@chr13:23928766..23928779, + |
| 1.58e-31 | FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_1d9e73cc83d54f02486aae60a50ecc8f | p@chr7:112744083..112744109, - |
| 1.58e-31 | FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_1d9e73cc83d54f02486aae60a50ecc8f | p@chr7:112744083..112744109, - |
| 1.58e-31 | FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_1d9e73cc83d54f02486aae60a50ecc8f | p2@Rtp3 |
| 1.58e-31 | FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_1d9e73cc83d54f02486aae60a50ecc8f | p2@Rtp3 |
| 1.65e-31 | FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_96969abfb68383396dac07108f396ae1 | p3@Blvrb |
| 1.65e-31 | FFCP PHASE1:Mm9::chr16:93929757..93929773,-#_96969abfb68383396dac07108f396ae1 | p1@Cldn14 |
| 1.65e-31 | FFCP PHASE2:Mm9::chr16:93929757..93929773,-#_96969abfb68383396dac07108f396ae1 | p1@Cldn14 |
| 1.65e-31 | FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_96969abfb68383396dac07108f396ae1 | p3@Blvrb |
| 4.64e-31 | FFCP PHASE2:Mm9::chr3:19889134..19889149,+#_fd49ef486690a81679795a21d5e94fa0 | p9@Cp |
| 4.64e-31 | FFCP PHASE1:Mm9::chr3:19889134..19889149,+#_fd49ef486690a81679795a21d5e94fa0 | p9@Cp |
| 5.17e-31 | FFCP PHASE2:Mm9::chr16:90738753..90738764,+#_aab107b1a75a6b74ea7b849a2fbde6ef | p9@Mrap |
| 5.17e-31 | FFCP PHASE1:Mm9::chr16:90738753..90738764,+#_aab107b1a75a6b74ea7b849a2fbde6ef | p9@Mrap |
| 4.06e-30 | FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_57f6a6a355847bcda0067935f149c9b1 | p@chr1:173155793..173155841, + |
| 4.06e-30 | FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_57f6a6a355847bcda0067935f149c9b1 | p@chr1:173155793..173155841, + |
| 4.4e-30 | FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_4510ebc41462425c8e788c1228c5ff36 | p@chr17:12584645..12584657, + |
| 4.4e-30 | FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_4510ebc41462425c8e788c1228c5ff36 | p@chr17:12584645..12584657, + |
| 4.77e-30 | FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_302b0bbac658c8afa9b00ad393279cd9 | p@chr1:166179426..166179437, + |
| 4.77e-30 | FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_302b0bbac658c8afa9b00ad393279cd9 | p@chr1:166179426..166179437, + |
| 6.77e-30 | FFCP PHASE2:Mm9::chr6:37480157..37480158,+#_0111a79b11f040b7f0248ade3a319123 | p4@Akr1d1 |
| 6.77e-30 | FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_0111a79b11f040b7f0248ade3a319123 | p8@Insc |
| 6.77e-30 | FFCP PHASE1:Mm9::chr6:37480157..37480158,+#_0111a79b11f040b7f0248ade3a319123 | p4@Akr1d1 |
| 6.77e-30 | FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_0111a79b11f040b7f0248ade3a319123 | p8@Insc |
| 7.36e-30 | FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_3ed8d78fdc734389ff9e769bea6933b5 | p@chr5:90893974..90893978, + |
| 7.36e-30 | FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_3ed8d78fdc734389ff9e769bea6933b5 | p@chr5:90893974..90893978, + |
| 7.71e-30 | FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_1500bc88dc8581b5b8100f7e1b955543 | p@chr19:38191263..38191291, - |
| 7.71e-30 | FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_1500bc88dc8581b5b8100f7e1b955543 | p@chr19:38191263..38191291, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_9dd5efffda37d7a692a8f43602c45117 | p1@Serpina1b |
| 8.79e-30 | FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr12:105002005..105002050, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr7:30124207..30124222,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr7:30124207..30124222, - |
| 8.79e-30 | FFCP PHASE2:Mm9::chr3:82847318..82847329,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr3:82847318..82847329, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr3:82847318..82847329,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr3:82847318..82847329, - |
| 8.79e-30 | FFCP PHASE2:Mm9::chr7:30124207..30124222,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr7:30124207..30124222, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr16:22895286..22895297, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_9dd5efffda37d7a692a8f43602c45117 | p@chr16:22899236..22899246, + |
| 8.79e-30 | FFCP PHASE1:Mm9::chr11:46512551..46512577,-#_9dd5efffda37d7a692a8f43602c45117 | p5@Timd2 |
| 8.79e-30 | FFCP PHASE1:Mm9::chr6:11948347..11948351,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr6:11948347..11948351, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr6:128438012..128438027, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr16:22899322..22899331,+#_9dd5efffda37d7a692a8f43602c45117 | p@chr16:22899322..22899331, + |
| 8.79e-30 | FFCP PHASE2:Mm9::chr16:22899236..22899246,+#_9dd5efffda37d7a692a8f43602c45117 | p@chr16:22899236..22899246, + |
| 8.79e-30 | FFCP PHASE2:Mm9::chr16:22899322..22899331,+#_9dd5efffda37d7a692a8f43602c45117 | p@chr16:22899322..22899331, + |
| 8.79e-30 | FFCP PHASE2:Mm9::chr12:105003025..105003036,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr12:105003025..105003036, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr12:105002005..105002050,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr12:105002005..105002050, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr12:105003025..105003036,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr12:105003025..105003036, - |
| 8.79e-30 | FFCP PHASE2:Mm9::chr6:11948347..11948351,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr6:11948347..11948351, - |
| 8.79e-30 | FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr6:128436196..128436215, - |
| 8.79e-30 | FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_9dd5efffda37d7a692a8f43602c45117 | p1@Serpina1b |
| 8.79e-30 | FFCP PHASE2:Mm9::chr6:128438012..128438027,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr6:128438012..128438027, - |
| 8.79e-30 | FFCP PHASE2:Mm9::chr11:46512551..46512577,-#_9dd5efffda37d7a692a8f43602c45117 | p5@Timd2 |
| 8.79e-30 | FFCP PHASE2:Mm9::chr16:22895286..22895297,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr16:22895286..22895297, - |
| 8.79e-30 | FFCP PHASE2:Mm9::chr6:128436196..128436215,-#_9dd5efffda37d7a692a8f43602c45117 | p@chr6:128436196..128436215, - |
| 9.07e-30 | FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_8b83e376d3a5285b1d5f181354f5c77d | p1@uc009nzu.1 |
| 9.07e-30 | FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_8b83e376d3a5285b1d5f181354f5c77d | p1@uc009nzu.1 |
| 9.31e-30 | FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_ab557942ac206f4c7dd0c782831241a7 | p@chr16:23449901..23449906, - |
| 9.31e-30 | FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_ab557942ac206f4c7dd0c782831241a7 | p@chr15:77605636..77605639, + |
| 9.31e-30 | FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_ab557942ac206f4c7dd0c782831241a7 | p@chr8:92849825..92849837, - |
| 9.31e-30 | FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_ab557942ac206f4c7dd0c782831241a7 | p@chr8:92849825..92849837, - |
| 9.31e-30 | FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_ab557942ac206f4c7dd0c782831241a7 | p@chr15:77605636..77605639, + |
| 9.31e-30 | FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_ab557942ac206f4c7dd0c782831241a7 | p@chr16:22895330..22895339, - |
| 9.31e-30 | FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_ab557942ac206f4c7dd0c782831241a7 | p@chr3:82835513..82835525, + |
| 9.31e-30 | FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_ab557942ac206f4c7dd0c782831241a7 | p@chr3:82835513..82835525, + |
| 9.31e-30 | FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_ab557942ac206f4c7dd0c782831241a7 | p@chr16:23449901..23449906, - |
| 9.31e-30 | FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_ab557942ac206f4c7dd0c782831241a7 | p@chr16:22895330..22895339, - |
| 9.46e-30 | FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_990916735cb0b1853e3ccaac57401290 | p3@Klkb1 |
| 9.46e-30 | FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_990916735cb0b1853e3ccaac57401290 | p3@Klkb1 |
| 9.86e-30 | FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_c47e5b2edc76c825e78868c747467cd2 | p@chr3:57191661..57191672, - |
| 9.86e-30 | FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_c47e5b2edc76c825e78868c747467cd2 | p@chr3:57191661..57191672, - |
