Personal tools

FFCP PHASE1:Hg19::chr3:16553696..16553720,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:16553696..16553720,+
|short_description=p@chr3:16553696..16553720,+
|description=CAGE_peak_at_chr3:16553696..16553720,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=NA
|HGNC=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr3:16553696..16553720,+
|id=chr3:16553696..16553720,+
|ontology_enrichment_celltype=CL:0000738!4.54e-66!140;CL:0002031!2.25e-53!124;CL:0002087!4.39e-53!119;CL:0000037!5.98e-51!172;CL:0000566!5.98e-51!172;CL:0000988!1.27e-50!182;CL:0002032!3.52e-46!165;CL:0000837!3.52e-46!165;CL:0000838!2.32e-37!52;CL:0000542!2.24e-36!53;CL:0000051!2.24e-36!53;CL:0002057!6.57e-25!42;CL:0000945!1.47e-22!24;CL:0000826!1.47e-22!24;CL:0000860!1.53e-22!45;CL:0000134!1.36e-19!358;CL:0000766!1.15e-18!76;CL:0002320!1.24e-18!365;CL:0000557!2.48e-18!71;CL:0002009!4.16e-17!65;CL:0000839!5.68e-16!70;CL:0000219!2.82e-15!390;CL:0000236!3.81e-15!14;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0000763!5.83e-15!112;CL:0000049!5.83e-15!112;CL:0000791!2.72e-13!18;CL:0000789!2.72e-13!18;CL:0002420!2.72e-13!18;CL:0002419!2.72e-13!18;CL:0000790!2.72e-13!18;CL:0000034!4.50e-13!444;CL:0000084!8.40e-13!25;CL:0000827!8.40e-13!25;CL:0000048!9.70e-13!430;CL:0000723!3.68e-12!436;CL:0000451!5.53e-11!10;CL:0000624!8.73e-10!6;CL:0000453!4.92e-09!5;CL:0000080!9.16e-09!6;CL:0000990!2.75e-08!8;CL:0000625!5.53e-07!11
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,2.70931945184821,1.33808328233255,6.29382842958246,6.52509976765262,4.95411594611443,0,0,0,0.232401601740905,0,0,7.20194031091441,9.6261334785668,9.54847831149748,0,0,0,0,0,0,0.697287110717054,0,0,1.1507695692886,1.2808035326455,0.709446689665756,2.06847408441971,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0,8.26426509401437,4.17207735198922,6.39337125799041,0.329851300186716,0.199463657621632,0,1.7412554317715,1.13477044938228,3.11411124497787,0.251248665256743,1.0429658368404,0.65156653411535,1.21079900526674,2.20966581592539,4.43047342417238,0.633765858935825,0.425208599930087,0,0.561643155732475,0.600707571366025,0.32145117339416,0.570025487482497,0,0,7.03984977845291,2.73069305631066,2.66852776159066,0.853460445133014,2.80277190925209,2.29900975981793,1.32208974556972,0.954053754535364,7.39976859842283,4.11066032559657,3.05818582500183,2.64342657158052,1.68152568894461,1.31692042387539,2.16380747125216,3.14408610199332,5.75684197198626,0,21.1849473311834,11.3627473376336,11.6896037044747,0.668462741311041,15.9087190036412,5.31681347000691,4.06205795647523,0.640456598628376,0.390178042679635,0.164437904603676,0.276350017785848,0.869409257205157,14.9769428793681,4.81573490561484,5.22677619024884,0,8.81407135284419,3.09264700934367,3.54227568827304,1.59282707162048,0.651083453856419,0,0.150575119077773,0,3.74792179657038,0.236777252044017,0,4.83856183739358,4.81392352410313,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,16.6943437013739,13.7278778587231,7.80060752792086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,0.576479813667846,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89607660706745,5.39068937148793,4.62034930607094,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,17.472850266308,3.30855429190677,0,0,0,0,0.61384789315225,0,0,0,0,0,0.154209693802656,0,0.492762936082855,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802940375518498,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,0.741383633679017,0.417687798021821,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,29.6965536847981,39.4638996824554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,1.82688897571344,0,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3682659425086,11.1606465863225,8.5054005013039,0,0,0,2.59983614611409,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,2.70931945184821,1.33808328233255,6.29382842958246,6.52509976765262,4.95411594611443,0,0,0,0.232401601740905,0,0,7.20194031091441,9.6261334785668,9.54847831149748,0,0,0,0,0,0,0.697287110717054,0,0,1.1507695692886,1.2808035326455,0.709446689665756,2.06847408441971,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0,8.26426509401437,4.17207735198922,6.39337125799041,0.329851300186716,0.199463657621632,0,1.7412554317715,1.13477044938228,3.11411124497787,0.251248665256743,1.0429658368404,0.65156653411535,1.21079900526674,2.20966581592539,4.43047342417238,0.633765858935825,0.425208599930087,0,0.561643155732475,0.600707571366025,0.32145117339416,0.570025487482497,0,0,7.03984977845291,2.73069305631066,2.66852776159066,0.853460445133014,2.80277190925209,2.29900975981793,1.32208974556972,0.954053754535364,7.39976859842283,4.11066032559657,3.05818582500183,2.64342657158052,1.68152568894461,1.31692042387539,2.16380747125216,3.14408610199332,5.75684197198626,0,21.1849473311834,11.3627473376336,11.6896037044747,0.668462741311041,15.9087190036412,5.31681347000691,4.06205795647523,0.640456598628376,0.390178042679635,0.164437904603676,0.276350017785848,0.869409257205157,14.9769428793681,4.81573490561484,5.22677619024884,0,8.81407135284419,3.09264700934367,3.54227568827304,1.59282707162048,0.651083453856419,0,0.150575119077773,0,3.74792179657038,0.236777252044017,0,4.83856183739358,4.81392352410313,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,16.6943437013739,13.7278778587231,7.80060752792086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,0.576479813667846,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89607660706745,5.39068937148793,4.62034930607094,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,17.472850266308,3.30855429190677,0,0,0,0,0.61384789315225,0,0,0,0,0,0.154209693802656,0,0.492762936082855,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802940375518498,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,0.741383633679017,0.417687798021821,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,29.6965536847981,39.4638996824554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,1.82688897571344,0,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3682659425086,11.1606465863225,8.5054005013039,0,0,0,2.59983614611409,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616
|short_description=p@chr3:16553696..16553720,+
}}
}}

Revision as of 18:28, 21 April 2012

Short description:p@chr3:16553696..16553720, +
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:16553696..16553720, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
10
20
30
40
50




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.