FFCP PHASE1:Hg19::chr13:112721457..112721482,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000128!1.02e-11!7;CL:0000126!1.02e-11!7;CL:0000127!1.02e-11!7;CL:0002453!1.02e-11!7;CL:0002319!1.33e-10!25;CL:0002605!1.39e-08!3;CL:0000047!4.20e-08!8;CL:0000133!4.61e-07!59;CL:0002603!6.08e-07!3 | |ontology_enrichment_celltype=CL:0000128!1.02e-11!7;CL:0000126!1.02e-11!7;CL:0000127!1.02e-11!7;CL:0002453!1.02e-11!7;CL:0002319!1.33e-10!25;CL:0002605!1.39e-08!3;CL:0000047!4.20e-08!8;CL:0000133!4.61e-07!59;CL:0002603!6.08e-07!3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001049!5.50e-76!57;UBERON:0005068!5.50e-76!57;UBERON:0006241!5.50e-76!57;UBERON:0007135!5.50e-76!57;UBERON:0001017!1.37e-73!82;UBERON:0005743!2.83e-72!86;UBERON:0000073!4.50e-64!94;UBERON:0001016!4.50e-64!94;UBERON:0002616!4.76e-63!59;UBERON:0000955!8.78e-60!69;UBERON:0006238!8.78e-60!69;UBERON:0002346!2.81e-58!90;UBERON:0001893!1.16e-57!34;UBERON:0002020!2.92e-57!34;UBERON:0003528!2.92e-57!34;UBERON:0002791!1.15e-55!33;UBERON:0001869!1.12e-53!32;UBERON:0003075!3.04e-53!86;UBERON:0007284!3.04e-53!86;UBERON:0002780!5.32e-53!41;UBERON:0001890!5.32e-53!41;UBERON:0006240!5.32e-53!41;UBERON:0003080!1.57e-51!42;UBERON:0000956!1.08e-39!25;UBERON:0000203!1.08e-39!25;UBERON:0003056!2.43e-37!61;UBERON:0000924!6.81e-36!173;UBERON:0006601!6.81e-36!173;UBERON:0002619!5.39e-33!22;UBERON:0000033!6.13e-33!123;UBERON:0004121!3.01e-32!169;UBERON:0000153!8.70e-31!129;UBERON:0007811!8.70e-31!129;UBERON:0001950!5.59e-29!20;UBERON:0007023!5.54e-26!115;UBERON:0003076!8.28e-25!15;UBERON:0003057!8.28e-25!15;UBERON:0004733!4.64e-19!12;UBERON:0002028!4.64e-19!12;UBERON:0007277!4.64e-19!12;UBERON:0002308!7.22e-19!9;UBERON:0000125!7.22e-19!9;UBERON:0004732!2.10e-17!13;UBERON:0000025!3.90e-16!194;UBERON:0009663!1.58e-15!7;UBERON:0002420!2.16e-15!9;UBERON:0007245!2.16e-15!9;UBERON:0010009!2.16e-15!9;UBERON:0010011!2.16e-15!9;UBERON:0000454!2.16e-15!9;UBERON:0000200!1.40e-13!6;UBERON:0002680!1.67e-13!9;UBERON:0001895!1.67e-13!9;UBERON:0010092!1.67e-13!9;UBERON:0002298!2.21e-12!8;UBERON:0004111!1.51e-10!241;UBERON:0000064!1.67e-10!219;UBERON:0001871!2.67e-10!7;UBERON:0000369!6.34e-10!4;UBERON:0002435!6.34e-10!4;UBERON:0000204!6.34e-10!4;UBERON:0010082!6.34e-10!4;UBERON:0002037!1.31e-08!6;UBERON:0006215!1.31e-08!6;UBERON:0000483!2.80e-08!309;UBERON:0001872!2.95e-08!5;UBERON:0002021!4.43e-08!5;UBERON:0000119!4.44e-08!312;UBERON:0000349!7.24e-08!5;UBERON:0005383!7.55e-08!3;UBERON:0005382!7.55e-08!3;UBERON:0000477!1.30e-07!286;UBERON:0002771!1.69e-07!3;UBERON:0002240!1.76e-07!3;UBERON:0001896!2.47e-07!3;UBERON:0005290!2.47e-07!3;UBERON:0010096!2.47e-07!3;UBERON:0006331!5.00e-07!3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,4.00730381983479,3.28498620174922,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,2.07322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,1.97081688457631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.417879593121,5.20559415430487,4.63973287666617,2.01019518401218,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,3.99227596002388,0,0,0,0,0,0.945550727071745,0,0,0,3.54296554325536,0.60298219312704,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,1.87411556580271,0,0,0,0,0,5.50930970934882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,1.001527445652,0.573409195690071,0.665574309221114,0.745156835296601,0,0,0,0,0,0,8.40541965942786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.553033744606923,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,8.07784696386395,2.47871528518004,0,0,0,0,0,0,0.963438376446893,0,1.43670473151436,0.615349092722265,2.26864526599546,1.1756732918917,0.968853873791107,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0.742913430802341,0,1.03343398250592,1.01465296310251,3.82882366312754,0,0,67.7104290784539,0,0,0,0,0,0,0,0,0.135939465953663,1.05236437700559,0,0,0,0.942693539496011,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951360726220549,0,0,0,0,0,0,0,0,0.196308467114945,1.48523200163543,0.8453114551668,0,0,0,0,1.07132363163395,0,0,0,0,0.860037498908708,0,1.42782129400921,5.67255897442491,0,0,0,0,0,0,0,0.101988829741982,0,1.65410819162721,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,4.00730381983479,3.28498620174922,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,2.07322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,1.97081688457631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.417879593121,5.20559415430487,4.63973287666617,2.01019518401218,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,3.99227596002388,0,0,0,0,0,0.945550727071745,0,0,0,3.54296554325536,0.60298219312704,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,1.87411556580271,0,0,0,0,0,5.50930970934882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,1.001527445652,0.573409195690071,0.665574309221114,0.745156835296601,0,0,0,0,0,0,8.40541965942786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.553033744606923,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,8.07784696386395,2.47871528518004,0,0,0,0,0,0,0.963438376446893,0,1.43670473151436,0.615349092722265,2.26864526599546,1.1756732918917,0.968853873791107,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0.742913430802341,0,1.03343398250592,1.01465296310251,3.82882366312754,0,0,67.7104290784539,0,0,0,0,0,0,0,0,0.135939465953663,1.05236437700559,0,0,0,0.942693539496011,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951360726220549,0,0,0,0,0,0,0,0,0.196308467114945,1.48523200163543,0.8453114551668,0,0,0,0,1.07132363163395,0,0,0,0,0.860037498908708,0,1.42782129400921,5.67255897442491,0,0,0,0,0,0,0,0.101988829741982,0,1.65410819162721,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@SOX1 | |short_description=p1@SOX1 | ||
}} | }} |
Revision as of 11:10, 20 April 2012
Short description: | p1@SOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -430bp_to_ENST00000330949, NM_005986, uc001vsb.1_5end |
EntrezGene: | SOX1 |
HGNC: | 11189 |
UniProt: | O00570 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.