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|def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
|def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
|xref=
|xref=
|is_a=UBERON:0000058;;UBERON:0003914;;UBERON:0004819;;UBERON:0006553;;UBERON:0006555
|is_a=UBERON:0003914;;UBERON:0004819;;UBERON:0006553;;UBERON:0006555
|synonym=
|synonym=
|comment=pronephric duct or mesonephric duct
|comment=pronephric duct or mesonephric duct
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002113
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:08, 26 June 2012

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct),UBERON:0006555(excretory tube)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chr13:21380610..21380620,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21380610..21380620, -
3.28e-58FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:25678985..25679033, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:104945515..104945524, -
3.28e-58FFCP PHASE1:Mm9::chrX:130496260..130496269,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798132..75798152, -
3.28e-58FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_006addc8dc83332a4f4d9db9adb060d7p3@Acad8
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:67453354..67453365, -
3.28e-58FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378296..21378303, +
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_006addc8dc83332a4f4d9db9adb060d7p7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:164787162..164787188, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379437..31379448, +
3.28e-58FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:24670830..24670845, +
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_006addc8dc83332a4f4d9db9adb060d7p@chr15:75304900..75304907, +
3.28e-58FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:85390145..85390153, +
3.28e-58FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_006addc8dc83332a4f4d9db9adb060d7p3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_006addc8dc83332a4f4d9db9adb060d7p5@Defb43
3.28e-58FFCP PHASE1:Mm9::chrX:10488683..10488691,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:10488683..10488691, +
3.28e-58FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26719400..26719404, -
3.28e-58FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:46301295..46301302, -
3.28e-58FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:168436322..168436326, -
3.28e-58FFCP PHASE1:Mm9::chr1:90155966..90155989,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155966..90155989, +
3.28e-58FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE1:Mm9::chr8:23057222..23057234,+#_006addc8dc83332a4f4d9db9adb060d7p1@Defb13
3.28e-58FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_006addc8dc83332a4f4d9db9adb060d7p4@Atp4a
3.28e-58FFCP PHASE1:Mm9::chr1:155698166..155698174,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155698166..155698174, -
3.28e-58FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_006addc8dc83332a4f4d9db9adb060d7p@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr15:54678902..54678911,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:54678902..54678911, -
3.28e-58FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:63779573..63779582, +
3.28e-58FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_006addc8dc83332a4f4d9db9adb060d7p11@Arhgef40
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_006addc8dc83332a4f4d9db9adb060d7p4@Defb20
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597725..89597743, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151927980..151927988, +
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_006addc8dc83332a4f4d9db9adb060d7p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_006addc8dc83332a4f4d9db9adb060d7p5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378968..21378988, -
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_006addc8dc83332a4f4d9db9adb060d7p@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:66513886..66513897, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_006addc8dc83332a4f4d9db9adb060d7p6@Defb20
3.28e-58FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611214..63611229, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141429..19141440, +
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:65941913..65941923, -
3.28e-58FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_006addc8dc83332a4f4d9db9adb060d7p6@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:147624258..147624285, -
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:46301295..46301302, -
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378766..21378781, +
3.28e-58FFCP PHASE1:Mm9::chrX:50280126..50280140,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379845..31379855, +
3.28e-58FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_006addc8dc83332a4f4d9db9adb060d7p2@Wfdc11
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_006addc8dc83332a4f4d9db9adb060d7p19@Clu
3.28e-58FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_006addc8dc83332a4f4d9db9adb060d7p@chr15:75347689..75347703, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:92995710..92995753, +
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_006addc8dc83332a4f4d9db9adb060d7p@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_006addc8dc83332a4f4d9db9adb060d7p4@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379306..21379315, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_006addc8dc83332a4f4d9db9adb060d7p21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:148445639..148445665, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:12571771..12571780, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752228..25752237, +
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_006addc8dc83332a4f4d9db9adb060d7p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:25706249..25706254, +

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