CL:0002577: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date=2011-03-02T03:21:30Z | |obo_creation_date=2011-03-02T03:21:30Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:27, 26 June 2012
| Name: | placental epithelial cell |
|---|---|
| Namespace: | cell |
| Definition: | "An epithelial cell of the placenta." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-02T03:21:30Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0000349(extraembryonic cell) |
|---|
Children
| derives from: | FF:0000136 (human placental epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11278-116H9 (Placental Epithelial Cells, donor1)
- 11355-117H5 (Placental Epithelial Cells, donor2)
- 11427-118G5 (Placental Epithelial Cells, donor3)
Mouse (Mus musculus)
- 11278-116H9 (Placental Epithelial Cells, donor1)
- 11355-117H5 (Placental Epithelial Cells, donor2)
- 11427-118G5 (Placental Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002577 (placental epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.33e-118 | FFCP PHASE1:Hg19::chr11:1982869..1982890,+#_ef4f7c485c626229565f9c18c29bbda8 | p@chr11:1982869..1982890, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr11:1982869..1982890,+#_ef4f7c485c626229565f9c18c29bbda8 | p@chr11:1982869..1982890, + |
| 5.2e-118 | FFCP PHASE2:Hg19::chr5:153858046..153858049,+#_b4c0067320767e25bea2f5802ba49d13 | p@chr5:153858046..153858049, + |
| 5.2e-118 | FFCP PHASE1:Hg19::chr5:153858046..153858049,+#_b4c0067320767e25bea2f5802ba49d13 | p@chr5:153858046..153858049, + |
| 7.78e-118 | FFCP PHASE2:Hg19::chr5:153854787..153854796,-#_2c8ad3eb0b89511fcb7380fb4303bb3e | p@chr5:153854787..153854796, - |
| 7.78e-118 | FFCP PHASE1:Hg19::chr5:153854787..153854796,-#_2c8ad3eb0b89511fcb7380fb4303bb3e | p@chr5:153854787..153854796, - |
| 1.16e-117 | FFCP PHASE1:Hg19::chr1:209704573..209704587,+#_988a98cb7af19216f61bacf55bfc240d | p@chr1:209704573..209704587, + |
| 1.16e-117 | FFCP PHASE2:Hg19::chr1:209704573..209704587,+#_988a98cb7af19216f61bacf55bfc240d | p@chr1:209704573..209704587, + |
| 1.73e-117 | FFCP PHASE2:Hg19::chr1:209704648..209704656,+#_24a52af07567268f9f91399093851551 | p@chr1:209704648..209704656, + |
| 1.73e-117 | FFCP PHASE1:Hg19::chr1:209704648..209704656,+#_24a52af07567268f9f91399093851551 | p@chr1:209704648..209704656, + |
| 7.95e-99 | FFCP PHASE2:Hg19::chr14:24729174..24729183,-#_0c87205c107d681daccea6c805f582d7 | p17@TGM1 |
| 7.95e-99 | FFCP PHASE1:Hg19::chr14:24729174..24729183,-#_0c87205c107d681daccea6c805f582d7 | p17@TGM1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:134044856..134044890,+#_23b10943492df83122e821162fec39f2 | p@chr3:134044856..134044890, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:89143573..89143607,-#_23b10943492df83122e821162fec39f2 | p@chr5:89143573..89143607, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:89143573..89143607,-#_23b10943492df83122e821162fec39f2 | p@chr5:89143573..89143607, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:134044856..134044890,+#_23b10943492df83122e821162fec39f2 | p@chr3:134044856..134044890, + |
| 2.17e-98 | FFCP PHASE2:Hg19::chr3:55384353..55384357,+#_f08e32a8ac0b5604fefdb52d0080c230 | p@chr3:55384353..55384357, + |
| 2.17e-98 | FFCP PHASE1:Hg19::chr3:55384353..55384357,+#_f08e32a8ac0b5604fefdb52d0080c230 | p@chr3:55384353..55384357, + |
| 3.03e-98 | FFCP PHASE2:Hg19::chr1:209704612..209704625,+#_86cc0646ed5cdb33e590d90552437b4b | p@chr1:209704612..209704625, + |
| 3.03e-98 | FFCP PHASE1:Hg19::chr1:209704612..209704625,+#_86cc0646ed5cdb33e590d90552437b4b | p@chr1:209704612..209704625, + |
| 4.24e-98 | FFCP PHASE1:Hg19::chr17:37824598..37824605,+#_b741a10344d777185a3cc73a089c10a3 | p15@PNMT |
| 4.24e-98 | FFCP PHASE2:Hg19::chr17:37824598..37824605,+#_b741a10344d777185a3cc73a089c10a3 | p15@PNMT |
| 1.52e-87 | FFCP PHASE2:Hg19::chr12:51785088..51785093,-#_352ba28177a4009a929efb025b9d368e | p12@GALNT6 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr12:51785088..51785093,-#_352ba28177a4009a929efb025b9d368e | p12@GALNT6 |
| 2.28e-85 | FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_46701ea0f9fc40d6009929eb64b2c96d | p@chr14:104202639..104202646, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_46701ea0f9fc40d6009929eb64b2c96d | p@chr14:104202639..104202646, - |
| 3.04e-85 | FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_87a48079163927a736803ce5b62dc83c | p@chr9:88126069..88126080, - |
| 3.04e-85 | FFCP PHASE2:Hg19::chr5:153855055..153855066,-#_87a48079163927a736803ce5b62dc83c | p@chr5:153855055..153855066, - |
| 3.04e-85 | FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_87a48079163927a736803ce5b62dc83c | p@chr9:88126069..88126080, - |
| 3.04e-85 | FFCP PHASE1:Hg19::chr5:153855055..153855066,-#_87a48079163927a736803ce5b62dc83c | p@chr5:153855055..153855066, - |
| 4.06e-85 | FFCP PHASE2:Hg19::chr17:37824217..37824226,+#_79048f44b856e3ffd2a4dc2b227b5e8e | p12@PNMT |
| 4.06e-85 | FFCP PHASE1:Hg19::chr17:37824217..37824226,+#_79048f44b856e3ffd2a4dc2b227b5e8e | p12@PNMT |
| 4.06e-85 | FFCP PHASE2:Hg19::chr20:61288222..61288232,+#_79048f44b856e3ffd2a4dc2b227b5e8e | p14@SLCO4A1 |
| 4.06e-85 | FFCP PHASE1:Hg19::chr20:61288222..61288232,+#_79048f44b856e3ffd2a4dc2b227b5e8e | p14@SLCO4A1 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr5:170239966..170239982,+#_60a02e55ac967cc5e24a5fafa8fa5132 | p@chr5:170239966..170239982, + |
| 1.28e-84 | FFCP PHASE1:Hg19::chr5:170239966..170239982,+#_60a02e55ac967cc5e24a5fafa8fa5132 | p@chr5:170239966..170239982, + |
| 2.27e-84 | FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_bebbacb6af527839b7c98178355082c6 | p@chr10:131344593..131344605, + |
| 2.27e-84 | FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_bebbacb6af527839b7c98178355082c6 | p@chr10:131344593..131344605, + |
| 3.03e-84 | FFCP PHASE2:Hg19::chr5:170176045..170176055,-#_60e5500f787b02c61ed165cbe487c31d | p@chr5:170176045..170176055, - |
| 3.03e-84 | FFCP PHASE1:Hg19::chr5:170176045..170176055,-#_60e5500f787b02c61ed165cbe487c31d | p@chr5:170176045..170176055, - |
| 7.81e-75 | FFCP PHASE1:Hg19::chr19:36593849..36593866,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651 | p@chr19:36593849..36593866, + |
| 7.81e-75 | FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651 | p@chr2:237683203..237683210, + |
| 7.81e-75 | FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651 | p@chr2:237683203..237683210, + |
| 7.81e-75 | FFCP PHASE2:Hg19::chr19:36593849..36593866,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651 | p@chr19:36593849..36593866, + |
| 1.29e-74 | FFCP PHASE2:Hg19::chr3:146323019..146323049,-#_556db4f293f64a5ba168d570c432de66 | p1@PLSCR5 |
| 1.29e-74 | FFCP PHASE1:Hg19::chr3:146323019..146323049,-#_556db4f293f64a5ba168d570c432de66 | p1@PLSCR5 |
| 1.66e-74 | FFCP PHASE1:Hg19::chr8:27995319..27995365,+#_f63d06dd2f9bff772ee7daa1e5884e41 | p@chr8:27995319..27995365, + |
| 1.66e-74 | FFCP PHASE2:Hg19::chr8:27995319..27995365,+#_f63d06dd2f9bff772ee7daa1e5884e41 | p@chr8:27995319..27995365, + |
| 3.54e-74 | FFCP PHASE1:Hg19::chr11:1950008..1950019,+#_d902147939db10102fc90d76916963d3 | p@chr11:1950008..1950019, + |
| 3.54e-74 | FFCP PHASE2:Hg19::chr11:1950008..1950019,+#_d902147939db10102fc90d76916963d3 | p@chr11:1950008..1950019, + |
| 9.64e-74 | FFCP PHASE2:Hg19::chr17:2278441..2278454,+#_8c001e5f36105abf0d23540ee6b0cca5 | p13@SGSM2 |
| 9.64e-74 | FFCP PHASE1:Hg19::chr17:2278441..2278454,+#_8c001e5f36105abf0d23540ee6b0cca5 | p13@SGSM2 |
| 9.82e-67 | FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_381d94f2097d557c670dcd0ba6ff0b9a | p@chr2:237682972..237682977, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_381d94f2097d557c670dcd0ba6ff0b9a | p@chr2:237682972..237682977, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_a8784ff9033a58c608852c55b5429542 | p@chr19:36592910..36592917, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_a8784ff9033a58c608852c55b5429542 | p@chr19:36592910..36592917, + |
| 1.92e-66 | FFCP PHASE1:Hg19::chr3:54925431..54925442,+#_a54234e2a1f836dcf0877c4ef423c311 | p@chr3:54925431..54925442, + |
| 1.92e-66 | FFCP PHASE2:Hg19::chr3:54925431..54925442,+#_a54234e2a1f836dcf0877c4ef423c311 | p@chr3:54925431..54925442, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:75796805..75796806,-#_bb27161f6394f5e7be900a06d93e7004 | p25@FAM176A |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:75796805..75796806,-#_bb27161f6394f5e7be900a06d93e7004 | p25@FAM176A |
| 2.41e-66 | FFCP PHASE1:Hg19::chr10:134227398..134227410,+#_fab42f218fb2065028e9d3e1a2e96dca | p@chr10:134227398..134227410, + |
| 2.41e-66 | FFCP PHASE2:Hg19::chr10:134227398..134227410,+#_fab42f218fb2065028e9d3e1a2e96dca | p@chr10:134227398..134227410, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr1:209704633..209704641,+#_ee6fb42530daa9b85557599eb7cd41df | p@chr1:209704633..209704641, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr1:209704633..209704641,+#_ee6fb42530daa9b85557599eb7cd41df | p@chr1:209704633..209704641, + |
| 3.76e-66 | FFCP PHASE1:Hg19::chr17:2278481..2278491,+#_03d2407e50f788909cc7cf4ae54c41fc | p14@SGSM2 |
| 3.76e-66 | FFCP PHASE2:Hg19::chr17:2278481..2278491,+#_03d2407e50f788909cc7cf4ae54c41fc | p14@SGSM2 |
| 4.68e-66 | FFCP PHASE1:Hg19::chr11:64008110..64008119,+#_3637cf93e85e6d7b7eb9c80b878f0479 | p23@FKBP2 |
| 4.68e-66 | FFCP PHASE2:Hg19::chr11:64008110..64008119,+#_3637cf93e85e6d7b7eb9c80b878f0479 | p23@FKBP2 |
| 5.88e-66 | FFCP PHASE2:Hg19::chr6:31083761..31083775,-#_5f617f3000b193c292f01b93ae0e4e90 | p@chr6:31083761..31083775, - |
| 5.88e-66 | FFCP PHASE1:Hg19::chr6:31083761..31083775,-#_5f617f3000b193c292f01b93ae0e4e90 | p@chr6:31083761..31083775, - |
| 7.35e-66 | FFCP PHASE1:Hg19::chr6:31083723..31083738,-#_af539e44cc8cbeb39363c6b2396456ee | p@chr6:31083723..31083738, - |
| 7.35e-66 | FFCP PHASE2:Hg19::chr6:31083723..31083738,-#_af539e44cc8cbeb39363c6b2396456ee | p@chr6:31083723..31083738, - |
| 1.33e-60 | FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_1fabe95a62746a0e7c552e8850bbc7e6 | p@chr19:36592982..36592993, + |
| 1.33e-60 | FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_1fabe95a62746a0e7c552e8850bbc7e6 | p@chr19:36592959..36592975, + |
| 1.33e-60 | FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_1fabe95a62746a0e7c552e8850bbc7e6 | p@chr19:36592982..36592993, + |
| 1.33e-60 | FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_1fabe95a62746a0e7c552e8850bbc7e6 | p@chr19:36592959..36592975, + |
| 4.46e-60 | FFCP PHASE1:Hg19::chr14:24729251..24729267,-#_81d8b46f2beffb478d1ed02e07335106 | p9@TGM1 |
| 4.46e-60 | FFCP PHASE2:Hg19::chr14:24729251..24729267,-#_81d8b46f2beffb478d1ed02e07335106 | p9@TGM1 |
| 4.46e-60 | FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_81d8b46f2beffb478d1ed02e07335106 | p@chr18:6286777..6286797, + |
| 4.46e-60 | FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_81d8b46f2beffb478d1ed02e07335106 | p@chr18:6286777..6286797, + |
| 7.24e-55 | FFCP PHASE2:Hg19::chr16:81679150..81679182,+#_35de35ad2f6b32ddf5382a26290db101 | p17@CMIP |
| 7.24e-55 | FFCP PHASE1:Hg19::chr16:81679150..81679182,+#_35de35ad2f6b32ddf5382a26290db101 | p17@CMIP |
| 8.69e-55 | FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_01e47c42c98026ac645f8f90d7c61119 | p4@SLCO4A1 |
| 8.69e-55 | FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_01e47c42c98026ac645f8f90d7c61119 | p4@SLCO4A1 |
| 1.25e-54 | FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_df7521856e8b6eb4e7ea78a1fcc16918 | p@chr6:12161831..12161855, + |
| 1.25e-54 | FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_df7521856e8b6eb4e7ea78a1fcc16918 | p@chr6:12161831..12161855, + |
| 1.81e-54 | FFCP PHASE1:Hg19::chr10:50818416..50818427,+#_3ac1905ecc2b88499b7af2b4a9dd565b | p3@SLC18A3 |
| 1.81e-54 | FFCP PHASE2:Hg19::chr10:50818416..50818427,+#_3ac1905ecc2b88499b7af2b4a9dd565b | p3@SLC18A3 |
| 2.19e-53 | FFCP PHASE2:Hg19::chr19:48980975..48980978,+#_dd5aa7d188bc2b93b3a242d0aa34d9ed | p@chr19:48980975..48980978, + |
| 2.19e-53 | FFCP PHASE1:Hg19::chr19:48980975..48980978,+#_dd5aa7d188bc2b93b3a242d0aa34d9ed | p@chr19:48980975..48980978, + |
| 2.19e-53 | FFCP PHASE1:Hg19::chr11:16893073..16893090,-#_dd5aa7d188bc2b93b3a242d0aa34d9ed | p@chr11:16893073..16893090, - |
| 2.19e-53 | FFCP PHASE2:Hg19::chr11:16893073..16893090,-#_dd5aa7d188bc2b93b3a242d0aa34d9ed | p@chr11:16893073..16893090, - |
| 3.75e-53 | FFCP PHASE2:Hg19::chr19:45848386..45848393,+#_7f313eb7a32b4beefd371dde70e6845f | p6@KLC3 |
| 3.75e-53 | FFCP PHASE1:Hg19::chr12:4140802..4140815,+#_7f313eb7a32b4beefd371dde70e6845f | p@chr12:4140802..4140815, + |
| 3.75e-53 | FFCP PHASE1:Hg19::chr19:45848386..45848393,+#_7f313eb7a32b4beefd371dde70e6845f | p6@KLC3 |
| 3.75e-53 | FFCP PHASE2:Hg19::chr12:4140802..4140815,+#_7f313eb7a32b4beefd371dde70e6845f | p@chr12:4140802..4140815, + |
| 6.85e-51 | FFCP PHASE1:Hg19::chr5:153858071..153858085,+#_0c3788dc4e20bda1326ad544b94a18aa | p@chr5:153858071..153858085, + |
| 6.85e-51 | FFCP PHASE2:Hg19::chr5:153858071..153858085,+#_0c3788dc4e20bda1326ad544b94a18aa | p@chr5:153858071..153858085, + |
| 8.11e-51 | FFCP PHASE1:Hg19::chr5:153855212..153855222,-#_519d166372a08472299e6d0993a08266 | p@chr5:153855212..153855222, - |
| 8.11e-51 | FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_519d166372a08472299e6d0993a08266 | p@chr2:237683156..237683171, + |
