FFCP PHASE1:Hg19::chr1:22214092..22214113,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|description=CAGE_peak_at_chr1:22214092..22214113,+ | |description=CAGE_peak_at_chr1:22214092..22214113,+ | ||
|id=chr1:22214092..22214113,+ | |id=chr1:22214092..22214113,+ | ||
|ontology_enrichment_celltype=CL: | |ontology_enrichment_celltype=CL:0002139;2.31e-33;24!CL:0000115;1.57e-31;36!CL:0000071;5.44e-29;18!CL:0002078;1.39e-23;45!CL:1000413;2.07e-15;9!CL:0000213;2.56e-14;58!CL:0000215;2.56e-14;58!CL:0002618;2.19e-12;3!CL:0002595;2.90e-12;5!CL:0002544;1.37e-10;6!CL:0002543;1.84e-10;6!CL:1000306;3.47e-09;4!CL:0002547;3.47e-09;4!CL:0002262;5.60e-09;2!CL:1000398;5.60e-09;2!CL:0002545;8.11e-09;2!CL:0002593;2.90e-08;2!CL:0002188;1.15e-07;5 | ||
|ontology_enrichment_development=CL:0002546;5.44e-29;18!CL:0000222;5.65e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON: | |ontology_enrichment_uberon=UBERON:0004638;5.44e-29;18!UBERON:0001986;5.44e-29;18!UBERON:0004852;5.44e-29;18!UBERON:0006914;9.59e-24;25!UBERON:0000487;3.24e-23;22!UBERON:0003513;3.11e-19;7!UBERON:0007500;4.29e-16;56!UBERON:0001981;4.29e-16;56!UBERON:0004537;4.29e-16;56!UBERON:0003915;2.07e-15;9!UBERON:0004700;2.07e-15;9!UBERON:0001917;2.07e-15;9!UBERON:0001637;3.53e-14;42!UBERON:0003509;3.53e-14;42!UBERON:0004572;3.53e-14;42!UBERON:0000055;3.85e-14;65!UBERON:0004573;3.97e-13;33!UBERON:0004571;3.97e-13;33!UBERON:0000490;9.91e-13;33!UBERON:0003834;2.90e-12;5!UBERON:0001533;2.90e-12;5!UBERON:0003914;1.06e-11;74!UBERON:0002049;2.36e-11;75!UBERON:0007798;2.36e-11;75!UBERON:0000947;2.15e-10;21!UBERON:0010191;2.15e-10;21!UBERON:0004797;3.47e-09;4!UBERON:0000415;3.47e-09;4!UBERON:0007240;3.47e-09;4!UBERON:0005742;3.47e-09;4!UBERON:0005734;3.47e-09;4!UBERON:0004664;3.47e-09;4!UBERON:0004663;3.47e-09;4!UBERON:0001281;5.60e-09;2!UBERON:0003497;5.60e-09;2!UBERON:0003909;5.60e-09;2!UBERON:0003835;5.60e-09;2!UBERON:0005800;8.11e-09;2!UBERON:0001515;8.11e-09;2!UBERON:0002456;2.90e-08;2!UBERON:0001009;1.09e-07;112!UBERON:0002066;1.36e-07;5!UBERON:0000025;2.17e-07;93!UBERON:0001638;5.57e-07;9!UBERON:0003920;5.57e-07;9!UBERON:0004582;5.57e-07;9 | ||
|phase1_expression=0.726713517082227,0,0.422863212287913,2.00146596706261,1.34088328328186,0.872338524100369,0,0.631719873426831,0.522371256399677,0,2.09340350391728,0.873765488520689,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0.626909442956176,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,0,0.869079113764942,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0.79504962946682,0,3.81854551768354,1.13061588384802,10.4874859052476,3.02629846134074,0.208994966536811,3.35941786920128,2.49036383880697,1.67360306382335,2.01414658554573,0.760272105718513,4.39311703586705,1.83831540172934,4.86085168729056,1.69669483739752,3.81699933464489,2.81528701208306,0,0,1.83201743930407,0,0,0.436094052142534,0.993943903390637,1.01304409331664,1.32409180813219,4.58938593198102,0,0.560677600142307,0,1.2333377420858,0,1.61652806483626,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.751190294532984,0.794025282120147,1.25572744982203,0,0.211931901159562,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,0.337552664482532,0.292311015483596,1.26216887122057,0.276149695926898,0.161646056818812,1.06502877754984,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,2.21446636387394,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.866198686566443,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.356857977594324,0.788512075169673,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,0.604780586659361,0.496215615637554,1.38115775959256,1.12264037773229,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0.784349769176855,0,0,1.13733384070897,0.680374821106063,0.647747748306418,13.880452742126,0,0.501689773854853,0,0,0.671624264166535,0,0,0.512900250232778,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.275673144969061,0.107420244868274,0.435050081742686,0.340906509664404,0.267096106940212,0.330569830721956,0.192190067365106,0,0,0,0.31481234683064,0,1.84820148105653,0.532306030317022,0,0.74129687641568,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0,0.606547444719948,0,0.842516912477962,0.48763373908959,1.70599442741899,1.05650146756755,0.136499911407986,0.141405431953713,0,0,3.3171948762061,1.31535265576129,0,0.655894752046633,0.202910376962704,0.92947049429925,0.845086807596724,0.143411352204052,0.491245205065606,0.35667105148125,0,2.11107635297664,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0.622079175323615,0.179736702294654,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0.23056390438806,0,0,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,1.47698645169619,0,0.141353071433941,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.290268993867255,0,0,0.387956065953678,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0.576361668616424,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,1.28929632425987,0,0.279282401272254,0.229160424011684,0,0,0.858452096273142,0,0.470284307407084,2.88239906833923,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,1.017074150619,0.542999601753713,0.864221491201268,0.653174720218818,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0.754703705257725,0,0.228840068396924,0.907385542579434,0.15543720058278,0,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.601030435988874,0,0,0.363697318405119,0,0,0,0,0,1.34699795506368,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0.231051332300676,1.1441462864015,0,0.397832444232549,0.0752103283492573,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0.121917924982269,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0,0.4226557275834,1.52934403219035,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0.126166424835079,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0.449126010532934,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.726713517082227,0,0.422863212287913,2.00146596706261,1.34088328328186,0.872338524100369,0,0.631719873426831,0.522371256399677,0,2.09340350391728,0.873765488520689,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0.626909442956176,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,0,0.869079113764942,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0.79504962946682,0,3.81854551768354,1.13061588384802,10.4874859052476,3.02629846134074,0.208994966536811,3.35941786920128,2.49036383880697,1.67360306382335,2.01414658554573,0.760272105718513,4.39311703586705,1.83831540172934,4.86085168729056,1.69669483739752,3.81699933464489,2.81528701208306,0,0,1.83201743930407,0,0,0.436094052142534,0.993943903390637,1.01304409331664,1.32409180813219,4.58938593198102,0,0.560677600142307,0,1.2333377420858,0,1.61652806483626,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.751190294532984,0.794025282120147,1.25572744982203,0,0.211931901159562,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,0.337552664482532,0.292311015483596,1.26216887122057,0.276149695926898,0.161646056818812,1.06502877754984,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,2.21446636387394,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.866198686566443,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.356857977594324,0.788512075169673,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,0.604780586659361,0.496215615637554,1.38115775959256,1.12264037773229,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0.784349769176855,0,0,1.13733384070897,0.680374821106063,0.647747748306418,13.880452742126,0,0.501689773854853,0,0,0.671624264166535,0,0,0.512900250232778,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.275673144969061,0.107420244868274,0.435050081742686,0.340906509664404,0.267096106940212,0.330569830721956,0.192190067365106,0,0,0,0.31481234683064,0,1.84820148105653,0.532306030317022,0,0.74129687641568,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0,0.606547444719948,0,0.842516912477962,0.48763373908959,1.70599442741899,1.05650146756755,0.136499911407986,0.141405431953713,0,0,3.3171948762061,1.31535265576129,0,0.655894752046633,0.202910376962704,0.92947049429925,0.845086807596724,0.143411352204052,0.491245205065606,0.35667105148125,0,2.11107635297664,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0.622079175323615,0.179736702294654,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0.23056390438806,0,0,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,1.47698645169619,0,0.141353071433941,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.290268993867255,0,0,0.387956065953678,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0.576361668616424,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,1.28929632425987,0,0.279282401272254,0.229160424011684,0,0,0.858452096273142,0,0.470284307407084,2.88239906833923,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,1.017074150619,0.542999601753713,0.864221491201268,0.653174720218818,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0.754703705257725,0,0.228840068396924,0.907385542579434,0.15543720058278,0,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.601030435988874,0,0,0.363697318405119,0,0,0,0,0,1.34699795506368,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0.231051332300676,1.1441462864015,0,0.397832444232549,0.0752103283492573,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0.121917924982269,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0,0.4226557275834,1.52934403219035,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0.126166424835079,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0.449126010532934,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr1:22214092..22214113,+ | |short_description=p@chr1:22214092..22214113,+ | ||
}} | }} |
Revision as of 18:14, 1 August 2012
Short description: | p@chr1:22214092..22214113, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:22214092..22214113, + |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.