MacroAPE 1083:CNhs12825 bl f2: Difference between revisions
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(Created page with "{{Macroape_1083
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809-111A8;0.221856!10597-108E3;0.0148357!10717-109I6;0.0142237!10455-106G5;0.00729357!10534-107G3;0.00799667!10429-106D6;0.00036628!10464-106H5;0.00343855!10827-111C8;0.00158516!10789-110H6;0.0535776!10828-111C9;0.0809881!10788-110H5;0.121684!10792-110H9;0.00881404!10765-110E9;0.0123745!10829-111D1;0.0163858!10830-111D2;0.00598839!10831-111D3;0.0582755!10832-111D4;0.0731805!10833-111D5;0.008626!10764-110E8;0.0149898!10770-110F5;0.0351404!10399-106A3;0.00523359!10400-106A4;0.00910921!10405-106A9;0.00557514!10834-111D6;0.00538764!10835-111D7;0.0109977!10836-111D8;0.00737713!10837-111D9;0.0103028!10699-109G6;0.00528472!10802-111A1;0.0613294!10796-110I4;0.00307033!10010-101C1;0.000227117!10810-111A9;0.000285587!10421-106C7;0.00278702!10708-109H6;0.0259383!12235-129G3;0.000120227!12236-129G4;0.380039!12237-129G5;0.212445!10167-103B5;0.131357!10151-102I7;0.0562389!10428-106D5;0.0200833!10795-110I3;0.000104627!10805-111A4;0.00173041!10052-101G7;0.0162737!10189-103D9;0.000150727!10589-108D4;5.89875e-05!10425-106D2;0.0411996!10427-106D4;0.0376147!10702-109G9;0.0046015!10432-106D9;0.381371!10496-107C1;0.0131617!10718-109I7;0.05976!10011-101C2;0.0204197!10053-101G8;0.000303439!10686-109F2;0.29831!10084-102B3;0.739733!10012-101C3;0.0111942!10085-102B4;0.0128902!10482-107A5;0.121419!10419-106C5;0.000940855!10080-102A8;0.000267193!10760-110E4;0.00167934!10709-109H7;0.00266277!10710-109H8;0.00143629!10703-109H1;0.0151089!10719-109I8;0.0151711!10642-109A3;0.000434933!10177-103C6;0.0069862!10164-103B2;0.0254944!10173-103C2;0.0203536!10166-103B4;0.312098!10083-102B2;0.127345!10188-103D8;0.0913373!10552-107I3;0.0102017!10553-107I4;0.000351575!10013-101C4;0.00108128!10536-107G5;0.00051923!10618-108G6;0.00630613!10423-106C9;0.0122974!10785-110H2;0.113875!12238-129G6;0.0141208!12239-129G7;0.138823!12240-129G8;0.24502!10416-106C2;0.0398205!10801-110I9;0.00619266!10766-110F1;0.0379794!10824-111C5;0.0167185!10825-111C6;0.00233955!10826-111C7;0.00399625!10454-106G4;0.00286363!10409-106B4;0.00214733!10638-108I8;0.0155761!10636-108I6;0.000916016!10513-107D9;0.0080675!10420-106C6;0.0079473!10082-102B1;0.000522944!10014-101C5;0.000514334!10070-101I7;0.000502916!10452-106G2;0.00148892!10453-106G3;0.000995907!10449-106F8;0.000524218!10042-101F6;0.000684147!10069-101I6;0.00374579!10193-103E4;0.000412588!10631-108I1;0.0218356!10438-106E6;0.00157116!10488-107B2;0.0109774!10196-103E7;0.00217442!10071-101I8;0.00652552!10071-101I8;0.000498665!10041-101F5;0.330814!10451-106G1;1.38282e-05!10450-106F9;0.000102967!10604-108F1;2.63317e-05!10605-108F2;0.0349155!10606-108F3;0.00637071!10603-108E9;0.030581!10497-107C2;0.0541249!10448-106F7;0.309209!10643-109A4;0.00205703!10426-106D3;0.000780909!10431-106D8;0.0530895!10197-103E8;0.0130182!10443-106F2;0.000555903!10815-111B5;0.0165949!10816-111B6;0.00472155!10817-111B7;0.00489639!10015-101C6;0.00343937!10410-106B5;0.000472498!10054-101G9;0.00929592!10758-110E2;0.000226347!10711-109H9;0.00860505!10040-101F4;0.00188568!10470-106I2;0.0350716!10415-106C1;0.0441597!10198-103E9;0.0157519!10614-108G2;0.000168756!10612-108F9;0.00843588!10549-107H9;0.00338654!10615-108G3;0.000327223!10487-107B1;0.00401085!10433-106E1;0.000448208!10688-109F4;0.00364752!10444-106F3;0.103032!10444-106F3;0.206814!10485-107A8;0.241981!10413-106B8;0.00238369!10175-103C4;0.0640417!10161-103A8;0.0267331!12131-128D7;0.00950344!10624-108H3;0.0771923!10712-109I1;0.000647784!10205-103F7;0.0056685!10206-103F8;7.77344e-05!10207-103F9;4.34685e-05!10050-101G5;1.14881e-05!10051-101G6;6.4577e-05!10016-101C7;1.19831e-05!10046-101G1;2.02159e-05!10778-110G4;0.00023614!10633-108I3;0.085357!10818-111B8;0.0465446!10819-111B9;0.101382!10820-111C1;0.0928739!10484-107A7;0.0984718!10808-111A7;0.000502628!10169-103B7;0.00688809!10153-102I9;0.0377697!13425-144D5;0.0152251!13433-144E4;0.00769488!13437-144E8;0.0113938!11904-125F5;0.00845331!11905-125F6;0.241027!10039-101F3;0.31617!10791-110H8;0.0272107!10017-101C8;0.000971329!10045-101F9;0.00331411!10509-107D5;0.00889406!10839-111E2;0.00227165!10692-109F8;0.00145605!10079-102A7;0.0111795!10078-102A6;2.97487e-05!10721-110A1;4.54079e-05!10569-108B2;0.00155494!10570-108B3;0.174498!10571-108B4;0.0802872!10647-109A8;0.148552!10752-110D5;0.00565947!10782-110G8;0.00984266!10726-110A6;0.995692!10018-101C9;0.22674!10086-102B5;0.0230814!10182-103D2;0.0805705!10165-103B3;0.0112569!10499-107C4;0.00550615!10408-106B3;0.00384513!10019-101D1;0.0215328!10068-101I5;0.000716285!10075-102A3;0.00168182!10077-102A5;0.000451298!10727-110A7;2.14137e-05!10775-110G1;0.0060329!10412-106B7;0.00204462!12231-129F8;0.10747!12232-129F9;0.00333431!12233-129G1;0.0012767!12234-129G2;0.00305777!10414-106B9;0.0517436!10170-103B8;0.00477869!10183-103D3;0.0848125!10150-102I6;0.0541922!10174-103C3;0.0209486!10155-103A2;0.00753211!10038-101F2;0.00292799!10838-111E1;0.00158853!10759-110E3;0.00252657!10514-107E1;0.00703264!10465-106H6;0.0120817!10691-109F7;0.0316704!10843-111E6;0.115269!10844-111E7;0.00403697!11747-123G1;0.0292195!11748-123G2;0.933717!11749-123G3;0.444403!11750-123G4;0.538129!11751-123G5;0.87826!11840-124H4;0.504323!11752-123G6;0.24539!11753-123G7;0.773171!11754-123G8;0.318066!11755-123G9;0.423279!11756-123H1;0.431463!11833-124G6;0.352486!11760-123H5;0.350392!11836-124G9;0.429438!11758-123H3;0.5108!11835-124G8;0.202179!11762-123H7;0.146879!11838-124H2;0.0568228!11757-123H2;0.131348!11759-123H4;0.950522!11761-123H6;0.502702!11842-124H6;0.101707!11837-124H1;0.997665!10568-108B1;0.182379!13230-141I8;0.481627!13231-141I9;0.115089!10696-109G3;0.111195!10493-107B7;0.322594!10494-107B8;0.00358535!10850-111F4;0.405894!10851-111F5;0.00733699!10852-111F6;0.112476!10853-111F7;0.175859!10854-111F8;0.0217435!10855-111F9;0.000492038!10856-111G1;0.477205!10847-111F1;0.359744!10846-111E9;0.0676978!10848-111F2;0.203899!10845-111E8;0.0125821!10857-111G2;0.0126445!10858-111G3;7.96716e-05!10156-103A3;0.00855226!11901-125F2;0.0238181!11902-125F3;0.0375676!11903-125F4;0.0616269!10689-109F5;0.00964935!10648-109A9;0.0135995!10784-110H1;0.00261258!10744-110C6;0.00683899!10772-110F7;0.0362068!10474-106I6;0.00286247!10600-108E6;0.0263229!10684-109E9;0.00429167!12226-129F3;0.0190591!12227-129F4;0.00713514!10508-107D4;0.119655!10539-107G8;0.126528!10607-108F4;0.543803!10555-107I6;0.00285807!10774-110F9;0.152876!10637-108I7;0.00186196!10663-109C6;0.000954204!10728-110A8;0.0136629!10729-110A9;0.0100986!10430-106D7;0.15969!10730-110B1;0.000163234!10813-111B3;0.0242147!10812-111B2;0.356315!10037-101F1;0.654951!10172-103C1;0.0207955!10163-103B1;0.0834986!10076-102A4;0.0196298!10073-102A1;0.0394159!10036-101E9;0.557623!10195-103E6;0.0163626!10277-104E7;0.0243132!10434-106E2;0.00564591!10550-107I1;0.00450649!10545-107H5;0.000358909!10544-107H4;0.0332861!10704-109H2;0.060348!10510-107D6;0.4525!10558-107I9;0.00146308!10020-101D2;0.125067!10732-110B3;0.0001499!10049-101G4;0.292153!10698-109G5;0.0318881!10437-106E5;0.0612132!10417-106C3;2.02195e-06!10035-101E8;0.216892!10171-103B9;0.0267865!10157-103A4;0.10235!10034-101E7;0.0268743!10072-101I9;0.0241917!10199-103F1;0.58514!10200-103F2;0.00461139!10697-109G4;6.29753e-05!10723-110A3;0.00967676!10179-103C8;0.0420439!10160-103A7;0.00763574!10180-103C9;0.0209255!10162-103A9;0.429334!10021-101D3;0.295947!10840-111E3;0.0021244!10706-109H4;0.00499348!10033-101E6;0.151534!10032-101E5;0.0155417!10490-107B4;0.0185349!10439-106E7;0.000287358!10022-101D4;0.000143925!10176-103C5;0.000393678!10469-106I1;0.0467093!10067-101I4;0.00358668!10411-106B6;0.00455153!10471-106I3;0.0118763!10030-101E3;0.00887425!10475-106I7;1.36501e-05!10787-110H4;0.0132327!10477-106I9;0.00846238!10695-109G2;0.0490961!11771-123I7;0.123316!11772-123I8;0.0422377!11773-123I9;0.11968!10093-102C3;0.950254!10442-106F1;0.00656347!10442-106F1;0.000254735!10201-103F3;0.000208266!10639-108I9;0.000181943!11843-124H7;0.0163089!11841-124H5;0.00269692!10693-109F9;0.00847187!10436-106E4;0.0230644!10483-107A6;0.0328372!10282-104F3;0.0168442!10023-101D5;0.00125698!10066-101I3;0.00122551!10065-101I2;0.000439205!10800-110I8;9.0019e-05!10610-108F7;0.0042499!10841-111E4;0.138618!10541-107H1;0.00103461!10842-111E5;0.00148034!10562-108A4;0.00219831!10024-101D6;0.0365454!10064-101I1;0.000951977!10609-108F6;0.000783775!10048-101G3;0.00799634!10781-110G7;0.00164955!10181-103D1;0.00660976!10159-103A6;0.00535139!10056-101H2;0.0057641!10737-110B8;0.00301396!10025-101D7;0.284651!10044-101F8;6.61193e-05!10424-106D1;0.000418708!10463-106H4;0.00402633!10616-108G4;0.0499216!10486-107A9;0.00676198!10062-101H8;0.0018716!10202-103F4;0.00350059!10158-103A5;0.000288609!10441-106E9;0.00474259!10031-101E4;4.45371e-06!10063-101H9;0.0119419!10063-101H9;0.409019!11763-123H8;0.000864983!11765-123I1;0.0385799!11768-123I4;0.0465486!10807-111A6;0.0979006!10790-110H7;0.00761042!10798-110I6;0.0018978!10786-110H3;0.37224!10591-108D6;0.00728368!10593-108D8;0.0111072!10590-108D5;0.00459046!10026-101D8;0.00382405!10096-102C6;0.0521752!10168-103B6;0.0507921!10154-103A1;0.0245334!10209-103G2;0.01672!10061-101H7;9.87726e-05!10027-101D9;0.00109418!10043-101F7;0.583316!10783-110G9;0.0435719!10028-101E1;5.6922e-05!10060-101H6;0.0401655!10203-103F5;0.00200299!10059-101H5;0.000489679!10047-101G2;0.000573613!10029-101E2;4.15901e-05!10058-101H4;4.03141e-05!10418-106C4;0.000422242!10492-107B6;0.00726094!10694-109G1;5.12218e-05!10797-110I5;0.791832!10057-101H3;0.0042231!10100-102D1;3.83719e-05!10055-101H1;0.00191721!10204-103F6;0.00887985!10191-103E2;0.0047175!10563-108A5;9.91285e-06 | ||
|name=CNhs12825_bl_f2 | |name=CNhs12825_bl_f2 | ||
|tomtom_result=Klf4#MA0039.2;0;0.00166508;0.792579;0.585232;10;GGGCTGGGGC;TGGGTGGGGC;+!CRZ1#MA0285.1;1;0.00179397;0.853928;0.585232;8;GGGCTGGGGC;GTGGCTTAG;-!ACE2#MA0267.1;-1;0.00206081;0.980947;0.585232;7;GGGCTGGGGC;TGCTGGT;-!TFAP2A#MA0003.1;-1;0.00246479;1.17324;0.585232;9;GGGCTGGGGC;GCCCGGGGG;+!SWI5#MA0402.1;-1;0.00337188;1.60501;0.640487;8;GGGCTGGGGC;TGCTGGTT;+!SP1#MA0079.2;1;0.00418161;1.99045;0.661292;9;GGGCTGGGGC;GGGGCGGGGT;+!Mafb#MA0117.1;-2;0.00491617;2.3401;0.661292;8;GGGCTGGGGC;GCTGACGG;+!NFE2L2#MA0150.1;-1;0.00557025;2.65144;0.661292;9;GGGCTGGGGC;TGCTGAGTCAT;-!Zfx#MA0146.1;1;0.00656601;3.12542;0.670066;10;GGGCTGGGGC;GGGGCCGAGGCCTG;+!CHA4#MA0283.1;-1;0.00705519;3.35827;0.670066;8;GGGCTGGGGC;GGCGGAGA;+!RUNX1#MA0002.2;-1;0.0078013;3.71342;0.673571;9;GGGCTGGGGC;GTCTGTGGTTT;+!Tcfcp2l1#MA0145.1;1;0.0141799;6.74961;0.794615;10;GGGCTGGGGC;CTGGTTTGAACTGG;-!INSM1#MA0155.1;0;0.0148201;7.05437;0.794615;10;GGGCTGGGGC;TGTCAGGGGGCG;+!BAS1#MA0278.1;12;0.0173799;8.27283;0.794615;9;GGGCTGGGGC;TTGACTTGACTCTGGCTGTGC;-!ESR1#MA0112.2;10;0.0179811;8.55901;0.794615;10;GGGCTGGGGC;AGGTCAGGGTGACCTGGGCC;-!YPR022C#MA0436.1;-2;0.0182075;8.66679;0.794615;7;GGGCTGGGGC;CGTGGGG;-!SP1#MA0079.2;2;0.0182621;8.69275;0.794615;8;GGGCTGGGGC;GGGGGCGGGG;-!Pax4#MA0068.1;6;0.0183556;8.73725;0.794615;10;GGGCTGGGGC;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!MET28#MA0332.1;-3;0.0191658;9.12292;0.794615;6;GGGCTGGGGC;CTGTGG;+!YGR067C#MA0425.1;4;0.0193678;9.21908;0.794615;10;GGGCTGGGGC;TGAAAAAGTGGGGT;- | |||
}} | }} |
Latest revision as of 12:58, 7 September 2012
Full Name: CNhs12825_bl_f2
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
Klf4#MA0039.2 | 0 | 0.00166508 | 0.792579 | 0.585232 | 10 | GGGCTGGGGC | TGGGTGGGGC | + |
CRZ1#MA0285.1 | 1 | 0.00179397 | 0.853928 | 0.585232 | 8 | GGGCTGGGGC | GTGGCTTAG | - |
ACE2#MA0267.1 | -1 | 0.00206081 | 0.980947 | 0.585232 | 7 | GGGCTGGGGC | TGCTGGT | - |
TFAP2A#MA0003.1 | -1 | 0.00246479 | 1.17324 | 0.585232 | 9 | GGGCTGGGGC | GCCCGGGGG | + |
SWI5#MA0402.1 | -1 | 0.00337188 | 1.60501 | 0.640487 | 8 | GGGCTGGGGC | TGCTGGTT | + |
SP1#MA0079.2 | 1 | 0.00418161 | 1.99045 | 0.661292 | 9 | GGGCTGGGGC | GGGGCGGGGT | + |
Mafb#MA0117.1 | -2 | 0.00491617 | 2.3401 | 0.661292 | 8 | GGGCTGGGGC | GCTGACGG | + |
NFE2L2#MA0150.1 | -1 | 0.00557025 | 2.65144 | 0.661292 | 9 | GGGCTGGGGC | TGCTGAGTCAT | - |
Zfx#MA0146.1 | 1 | 0.00656601 | 3.12542 | 0.670066 | 10 | GGGCTGGGGC | GGGGCCGAGGCCTG | + |
CHA4#MA0283.1 | -1 | 0.00705519 | 3.35827 | 0.670066 | 8 | GGGCTGGGGC | GGCGGAGA | + |
RUNX1#MA0002.2 | -1 | 0.0078013 | 3.71342 | 0.673571 | 9 | GGGCTGGGGC | GTCTGTGGTTT | + |
Tcfcp2l1#MA0145.1 | 1 | 0.0141799 | 6.74961 | 0.794615 | 10 | GGGCTGGGGC | CTGGTTTGAACTGG | - |
INSM1#MA0155.1 | 0 | 0.0148201 | 7.05437 | 0.794615 | 10 | GGGCTGGGGC | TGTCAGGGGGCG | + |
BAS1#MA0278.1 | 12 | 0.0173799 | 8.27283 | 0.794615 | 9 | GGGCTGGGGC | TTGACTTGACTCTGGCTGTGC | - |
ESR1#MA0112.2 | 10 | 0.0179811 | 8.55901 | 0.794615 | 10 | GGGCTGGGGC | AGGTCAGGGTGACCTGGGCC | - |
YPR022C#MA0436.1 | -2 | 0.0182075 | 8.66679 | 0.794615 | 7 | GGGCTGGGGC | CGTGGGG | - |
SP1#MA0079.2 | 2 | 0.0182621 | 8.69275 | 0.794615 | 8 | GGGCTGGGGC | GGGGGCGGGG | - |
Pax4#MA0068.1 | 6 | 0.0183556 | 8.73725 | 0.794615 | 10 | GGGCTGGGGC | GGGGGGGGAGTGGAGTATTGGAAATTTTTC | - |
MET28#MA0332.1 | -3 | 0.0191658 | 9.12292 | 0.794615 | 6 | GGGCTGGGGC | CTGTGG | + |
YGR067C#MA0425.1 | 4 | 0.0193678 | 9.21908 | 0.794615 | 10 | GGGCTGGGGC | TGAAAAAGTGGGGT | - |