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MacroAPE 1083:Motif688: Difference between revisions

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-106G5;0.358875!10534-107G3;0.0377449!10429-106D6;0.0995932!10464-106H5;0.119819!10827-111C8;0.245171!10789-110H6;0.0584844!10828-111C9;0.0172426!10788-110H5;0.0694714!10792-110H9;0.108143!10765-110E9;0.031141!10829-111D1;0.0605665!10830-111D2;0.0697665!10831-111D3;0.296404!10832-111D4;0.059497!10833-111D5;0.0610475!10764-110E8;0.0617909!10770-110F5;0.326639!10399-106A3;0.207821!10400-106A4;0.039817!10405-106A9;0.0566535!10834-111D6;0.0571921!10835-111D7;0.127921!10836-111D8;0.118099!10837-111D9;0.539092!10699-109G6;0.101982!10802-111A1;0.140417!10796-110I4;0.273542!10010-101C1;0.328981!10810-111A9;0.115989!10421-106C7;0.395651!10708-109H6;0.0646064!12235-129G3;0.122778!12236-129G4;0.786544!12237-129G5;0.89875!10167-103B5;0.664234!10151-102I7;0.000766605!10428-106D5;0.000692292!10795-110I3;0.679548!10805-111A4;0.0305829!10052-101G7;0.772581!10189-103D9;0.0384939!10589-108D4;0.11368!10425-106D2;0.962642!10427-106D4;0.290709!10702-109G9;0.0500522!10432-106D9;0.918146!10496-107C1;0.0558432!10718-109I7;0.0846646!10011-101C2;0.0561799!10053-101G8;0.0670372!10686-109F2;0.620391!10084-102B3;0.0433975!10012-101C3;0.000612222!10085-102B4;0.000627004!10482-107A5;0.0021538!10419-106C5;0.816322!10080-102A8;0.66133!10760-110E4;0.055952!10709-109H7;0.200926!10710-109H8;0.0767856!10703-109H1;0.354447!10719-109I8;0.199404!10642-109A3;0.946665!10177-103C6;0.403256!10164-103B2;0.00111509!10173-103C2;0.00106382!10166-103B4;0.00109409!10083-102B2;0.000822481!10188-103D8;0.000748706!10552-107I3;0.000613228!10553-107I4;0.0257109!10013-101C4;0.550419!10536-107G5;0.037629!10618-108G6;0.176063!10423-106C9;0.805914!10785-110H2;0.165651!12238-129G6;0.189367!12239-129G7;0.907577!12240-129G8;0.80147!10416-106C2;0.740083!10801-110I9;0.0329373!10766-110F1;0.0660596!10824-111C5;0.0436656!10825-111C6;0.0503456!10826-111C7;0.044325!10454-106G4;0.047346!10409-106B4;0.0276795!10638-108I8;0.056984!10636-108I6;0.035231!10513-107D9;0.108934!10420-106C6;0.298475!10082-102B1;0.502636!10014-101C5;0.106046!10070-101I7;0.111568!10452-106G2;0.0736258!10453-106G3;0.198167!10449-106F8;0.12961!10042-101F6;0.171189!10069-101I6;0.00134756!10193-103E4;0.204815!10631-108I1;0.00100117!10438-106E6;0.0581886!10488-107B2;0.2123!10196-103E7;0.0249194!10071-101I8;0.0490623!10071-101I8;0.117438!10041-101F5;0.00446828!10451-106G1;0.0242353!10450-106F9;0.186316!10604-108F1;0.490829!10605-108F2;0.488045!10606-108F3;0.173761!10603-108E9;0.316604!10497-107C2;0.267133!10448-106F7;0.0983379!10643-109A4;0.0796081!10426-106D3;0.779737!10431-106D8;0.143351!10197-103E8;0.237843!10443-106F2;0.139939!10815-111B5;0.0272168!10816-111B6;0.0381133!10817-111B7;0.049814!10015-101C6;0.0447379!10410-106B5;0.114755!10054-101G9;0.475782!10758-110E2;0.0108372!10711-109H9;0.169553!10040-101F4;0.12436!10470-106I2;0.000571232!10415-106C1;0.517506!10198-103E9;0.0211353!10614-108G2;0.0927329!10612-108F9;0.275636!10549-107H9;0.083212!10615-108G3;0.345801!10487-107B1;0.447253!10433-106E1;0.00726346!10688-109F4;0.152967!10444-106F3;0.1275!10444-106F3;0.409696!10485-107A8;0.434694!10413-106B8;0.271059!10175-103C4;0.0139789!10161-103A8;0.000888986!12131-128D7;0.000866046!10624-108H3;0.834553!10712-109I1;0.83178!10205-103F7;0.0670836!10206-103F8;0.0690339!10207-103F9;0.0484546!10050-101G5;0.121086!10051-101G6;0.237521!10016-101C7;0.189908!10046-101G1;0.115629!10778-110G4;0.0363064!10633-108I3;0.970005!10818-111B8;0.778181!10819-111B9;0.0330621!10820-111C1;0.0337734!10484-107A7;0.0372892!10808-111A7;0.0763476!10169-103B7;0.036615!10153-102I9;0.000541309!13425-144D5;0.000706305!13433-144E4;0.6723!13437-144E8;0.658813!11904-125F5;0.859079!11905-125F6;0.165404!10039-101F3;0.49598!10791-110H8;0.000607657!10017-101C8;0.237181!10045-101F9;0.0850892!10509-107D5;0.0103722!10839-111E2;0.0422471!10692-109F8;0.0955651!10079-102A7;0.223357!10078-102A6;0.142103!10721-110A1;0.235222!10569-108B2;0.179636!10570-108B3;0.592291!10571-108B4;0.917681!10647-109A8;0.709719!10752-110D5;0.315726!10782-110G8;0.168923!10726-110A6;0.0268058!10018-101C9;0.18357!10086-102B5;0.62501!10182-103D2;0.962981!10165-103B3;0.000729509!10499-107C4;0.00105353!10408-106B3;0.0394363!10019-101D1;0.397662!10068-101I5;0.137742!10075-102A3;0.0654143!10077-102A5;0.162034!10727-110A7;0.662465!10775-110G1;0.0194822!10412-106B7;0.0307539!12231-129F8;0.561253!12232-129F9;0.125503!12233-129G1;0.0482957!12234-129G2;0.268421!10414-106B9;0.64598!10170-103B8;0.420785!10183-103D3;0.00071452!10150-102I6;0.000696078!10174-103C3;0.000575044!10155-103A2;0.00176821!10038-101F2;0.00117048!10838-111E1;0.0015706!10759-110E3;0.558286!10514-107E1;0.457444!10465-106H6;0.022449!10691-109F7;0.139552!10843-111E6;0.0861457!10844-111E7;0.310958!11747-123G1;0.0594669!11748-123G2;0.0437896!11749-123G3;0.0504651!11750-123G4;0.0956311!11751-123G5;0.238721!11840-124H4;0.483409!11752-123G6;0.286242!11753-123G7;0.115452!11754-123G8;0.178605!11755-123G9;0.0752194!11756-123H1;0.0246078!11833-124G6;0.177472!11760-123H5;0.148701!11836-124G9;0.349989!11758-123H3;0.0911353!11835-124G8;0.438314!11762-123H7;0.988329!11838-124H2;0.519948!11757-123H2;0.780755!11759-123H4;0.292972!11761-123H6;0.199713!11842-124H6;0.578034!11837-124H1;0.32319!10568-108B1;0.740251!13230-141I8;0.056649!13231-141I9;0.517297!10696-109G3;0.569959!10493-107B7;0.283615!10494-107B8;0.0841286!10850-111F4;0.192516!10851-111F5;0.0999721!10852-111F6;0.033622!10853-111F7;0.563599!10854-111F8;0.00774296!10855-111F9;0.258916!10856-111G1;0.762193!10847-111F1;0.117869!10846-111E9;0.85337!10848-111F2;0.0453079!10845-111E8;0.0118655!10857-111G2;0.186588!10858-111G3;0.0140845!10156-103A3;0.0690414!11901-125F2;0.000586602!11902-125F3;0.53642!11903-125F4;0.617032!10689-109F5;0.329753!10648-109A9;0.0172192!10784-110H1;0.165257!10744-110C6;0.170079!10772-110F7;0.128961!10474-106I6;0.227762!10600-108E6;0.0368342!10684-109E9;0.2111!12226-129F3;0.102092!12227-129F4;0.203478!10508-107D4;0.0679783!10539-107G8;0.339467!10607-108F4;0.239046!10555-107I6;0.603797!10774-110F9;0.399898!10637-108I7;0.279567!10663-109C6;0.724129!10728-110A8;0.930011!10729-110A9;0.897751!10430-106D7;0.745862!10730-110B1;0.375823!10813-111B3;0.740748!10812-111B2;0.874056!10037-101F1;0.45625!10172-103C1;0.000668679!10163-103B1;0.00085848!10076-102A4;0.000649116!10073-102A1;0.000567204!10036-101E9;0.00648334!10195-103E6;0.000585714!10277-104E7;0.000721479!10434-106E2;0.00101652!10550-107I1;0.212568!10545-107H5;0.241745!10544-107H4;0.032724!10704-109H2;0.108487!10510-107D6;0.124498!10558-107I9;0.908013!10020-101D2;0.856228!10732-110B3;0.0311837!10049-101G4;0.440879!10698-109G5;0.590161!10437-106E5;0.357753!10417-106C3;0.0527303!10035-101E8;0.125206!10171-103B9;0.00061361!10157-103A4;0.000594805!10034-101E7;0.000604618!10072-101I9;0.000562885!10199-103F1;0.0080447!10200-103F2;0.244236!10697-109G4;0.118571!10723-110A3;0.387435!10179-103C8;0.8659!10160-103A7;0.00182637!10180-103C9;0.0013687!10162-103A9;0.00413133!10021-101D3;0.00139637!10840-111E3;0.218435!10706-109H4;0.0250657!10033-101E6;0.012699!10032-101E5;0.000842693!10490-107B4;0.000604463!10439-106E7;0.0533654!10022-101D4;0.589255!10176-103C5;0.0293201!10469-106I1;0.000999181!10067-101I4;0.324501!10411-106B6;0.00892045!10471-106I3;0.264312!10030-101E3;0.0235026!10475-106I7;0.00309678!10787-110H4;0.908158!10477-106I9;0.087224!10695-109G2;0.648894!11771-123I7;0.116652!11772-123I8;0.153844!11773-123I9;0.54308!10093-102C3;0.304837!10442-106F1;0.213078!10442-106F1;0.0111339!10201-103F3;0.0200779!10639-108I9;0.0889237!11843-124H7;0.917619!11841-124H5;0.0918046!10693-109F9;0.053927!10436-106E4;0.344197!10483-107A6;0.0637955!10282-104F3;0.0886422!10023-101D5;0.253973!10066-101I3;0.281818!10065-101I2;0.228062!10800-110I8;0.121132!10610-108F7;0.828781!10841-111E4;0.271703!10541-107H1;0.675864!10842-111E5;0.558803!10562-108A4;0.571231!10024-101D6;0.390357!10064-101I1;0.190796!10609-108F6;0.20942!10048-101G3;0.407887!10781-110G7;0.0528202!10181-103D1;0.416917!10159-103A6;0.00145559!10056-101H2;0.00150609!10737-110B8;0.00270871!10025-101D7;0.493223!10044-101F8;0.292492!10424-106D1;0.0473186!10463-106H4;0.0640158!10616-108G4;0.260897!10486-107A9;0.114586!10062-101H8;0.01322!10202-103F4;0.0435376!10158-103A5;0.128163!10441-106E9;0.00162086!10031-101E4;0.968271!10063-101H9;0.000632788!10063-101H9;0.00602968!11763-123H8;0.0968852!11765-123I1;0.57184!11768-123I4;0.539991!10807-111A6;0.595416!10790-110H7;0.683866!10798-110I6;0.62935!10786-110H3;0.574076!10591-108D6;0.672347!10593-108D8;0.899217!10590-108D5;0.968724!10026-101D8;0.261514!10096-102C6;0.223299!10168-103B6;0.760387!10154-103A1;0.000962275!10209-103G2;0.000835402!10061-101H7;0.211562!10027-101D9;0.110136!10043-101F7;0.366227!10783-110G9;0.315163!10028-101E1;0.0615935!10060-101H6;0.0821008!10203-103F5;0.0526853!10059-101H5;0.257785!10047-101G2;0.32205!10029-101E2;0.256081!10058-101H4;0.197702!10418-106C4;0.104348!10492-107B6;0.898797!10694-109G1;0.0606588!10797-110I5;0.507379!10057-101H3;0.0510297!10100-102D1;0.185817!10055-101H1;0.0182542!10204-103F6;0.027539!10191-103E2;0.00687195!10563-108A5;0.123473
|name=motif688
|name=motif688
|tomtom_result=IME1#MA0320.1;2;0.00395919;1.88457;1;6;GCTGAGC;CCGCCGAG;+!NHLH1#MA0048.1;5;0.00425721;2.02643;1;7;GCTGAGC;ACGCAGCTGCGC;-!CHA4#MA0283.1;1;0.00467554;2.22556;1;7;GCTGAGC;GGCGGAGA;+!NFE2L2#MA0150.1;1;0.00618843;2.94569;1;7;GCTGAGC;TGCTGAGTCAT;-!CRZ1#MA0285.1;3;0.0141145;6.71851;1;6;GCTGAGC;GTGGCTTAG;-!BAS1#MA0278.1;14;0.0150213;7.15014;1;7;GCTGAGC;TTGACTTGACTCTGGCTGTGC;-!Mafb#MA0117.1;0;0.0152158;7.24271;1;7;GCTGAGC;GCTGACGG;+!PDR8#MA0354.1;0;0.0159789;7.60597;1;7;GCTGAGC;GCGGAGAT;+
}}
}}

Latest revision as of 13:14, 7 September 2012

Full Name: motif688

Motif matrix
POACGT
010116271432769114
02410115203051832703
03342451081018709100253
04001628621155
05156303266405050
06543647041513212556
075591093078015029

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
IME1#MA0320.120.003959191.8845716GCTGAGCCCGCCGAG+
NHLH1#MA0048.150.004257212.0264317GCTGAGCACGCAGCTGCGC-
CHA4#MA0283.110.004675542.2255617GCTGAGCGGCGGAGA+
NFE2L2#MA0150.110.006188432.9456917GCTGAGCTGCTGAGTCAT-
CRZ1#MA0285.130.01411456.7185116GCTGAGCGTGGCTTAG-
BAS1#MA0278.1140.01502137.1501417GCTGAGCTTGACTTGACTCTGGCTGTGC-
Mafb#MA0117.100.01521587.2427117GCTGAGCGCTGACGG+
PDR8#MA0354.100.01597897.6059717GCTGAGCGCGGAGAT+
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