FFCP PHASE1:Mm9::chr5:121902471..121902527,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:121902471..121902527,- | |id=chr5:121902471..121902527,- | ||
|ontology_enrichment_celltype=CL:0000221!4.91e-16!44;CL:0000133!4.91e-16!44;CL:0002319!1.99e-15!43;CL:0000117!8.70e-14!23;CL:0000337!8.70e-14!23;CL:0000540!6.43e-13!33;CL:0000047!6.43e-13!33;CL:0000031!6.43e-13!33;CL:0000404!6.43e-13!33;CL:0000055!2.25e-12!50;CL:0000393!2.14e-10!39;CL:0000211!2.14e-10!39;CL:0002321!4.25e-07!70;CL:0000220!4.25e-07!70 | |ontology_enrichment_celltype=CL:0000221!4.91e-16!44;CL:0000133!4.91e-16!44;CL:0002319!1.99e-15!43;CL:0000117!8.70e-14!23;CL:0000337!8.70e-14!23;CL:0000540!6.43e-13!33;CL:0000047!6.43e-13!33;CL:0000031!6.43e-13!33;CL:0000404!6.43e-13!33;CL:0000055!2.25e-12!50;CL:0000393!2.14e-10!39;CL:0000211!2.14e-10!39;CL:0002321!4.25e-07!70;CL:0000220!4.25e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.91e-16,44;CL:0000133,4.91e-16,44;CL:0002319,1.99e-15,43;CL:0000117,8.70e-14,23;CL:0000337,8.70e-14,23;CL:0000540,6.43e-13,33;CL:0000047,6.43e-13,33;CL:0000031,6.43e-13,33;CL:0000404,6.43e-13,33;CL:0000393,2.14e-10,39;CL:0000211,2.14e-10,39;CL:0002321,4.25e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.28e-09!73;UBERON:0005743!7.28e-09!73;UBERON:0000073!4.15e-08!75;UBERON:0001016!4.15e-08!75 | |ontology_enrichment_uberon=UBERON:0001017!7.28e-09!73;UBERON:0005743!7.28e-09!73;UBERON:0000073!4.15e-08!75;UBERON:0001016!4.15e-08!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.28e-09,73;UBERON:0001016,4.15e-08,75 | |||
|phase1_expression=20.979498970728,5.93258192986914,4.54999239389536,5.14189159221611,10.0179145989269,6.21153306073992,9.81173090501208,4.00282302668886,1.267098499365,1.40438715793196,1.02730780935303,2.47293692885543,3.25281386869291,2.36035086531293,19.3203661853084,10.1237633694913,13.2916756844348,9.62159604342625,7.95263714913285,9.33657233955666,7.99406927420056,14.4964788753293,13.3211892460857,7.1996590257033,10.0940083669555,8.03924749761028,8.18447792702242,7.54149314400612,8.93110071444957,5.04060259519861,8.42575940490158,10.1604907753541,6.76571266343027,0,8.08784535303569,9.64160943079256,9.59595974433135,5.85944283031671,12.5013655123808,5.23523743973798,8.82347232046521,8.19654581950135,7.76816564849846,5.03587271902309,7.09638518536602,8.07605709511399,32.0780451182696,19.6222640742402,17.5748946187577,17.8875507148341,13.9986421625363,30.188038516644,9.2280433331755,1.45072428402269,3.02484419228218,11.0621557495457,15.1862723167541,6.70373719960675,29.3358868246417,21.6886301501533,25.3532561402472,22.3637391165627,24.0109594950008,21.5975932147536,17.7995945262055,18.4724829885986,19.7736072942147,31.1216827310459,24.8855069540346,27.6762173579966,23.5563956713548,29.9933533623994,25.3998822094356,25.2331046382805,21.5652309791032,33.0918763179608,24.2254938198655,14.4286692036262,13.5173749265494,25.190280956467,25.6165402086747,20.8365348222704,21.4970909231063,20.2594539611405,15.279824777681,20.6240009831567,18.6506901846825,19.9447407033072,6.36100023998746,6.57472572929034,6.95674772884027,6.88339101585109,3.39985666853875,5.93673510801599,5.19821133958135,6.72040330646003,7.16266542671934,3.40860645156115,4.41636207824877,5.65343319216544,24.5067550411424,14.115912515575,7.64415719119937,7.11066703153331,11.2575341325831,8.10751569520315,10.6160133453104,5.709193985953,1.55362730188303,3.71105347662062,10.0621489524359,10.0473607843007,8.99400439298628,7.68685466818375,6.23220147819235,5.02666365318702,15.8204779349999,2.74738778147832,8.84610551949874,10.676612096529,12.5879665522424,9.21262980956922,3.72783522436244,8.78342391034641,9.63454851341893,5.36459815938042,14.0183695671927,18.5969846607956,12.4528822531603,7.78911324905078,5.03250663100489,24.12563560567,3.82413504423008,4.34716277461562,9.55825004973976,7.78758062725237,15.2759045775474,8.21086006026614,5.05445516867349,3.78795340595653,14.8337304977482,19.0818746679783,12.0641626969584,12.6592046982001,12.5867523429957,11.6583485459213,13.2119431629218,4.39795730256327,12.287375597172,9.07709184805532,7.74184946321375,10.7405908889512,10.8438427197983,9.05455632957633,7.61393904709391,13.335295876839,11.2354109970118,10.0365683774739,13.924011470384,13.2560494422721,18.0585066185444,15.6653993471083,11.6004920436753,14.9540816128027,12.1871019181029,9.30135779001631,12.0723030629829,12.1435956061856,13.000228143165,11.984224877774,10.701082860053,11.9883989688773,9.44065495751518,8.99183005694491,3.36463917702604,11.936935035997,2.64335026387038,8.72686869989696,13.650448034255,13.4697269679054,9.79392706047909,8.26902450955704,9.33987784148455,11.7939888189787,7.59246498471219,13.3406153326449,13.3207660664143,11.3405189063456,9.35827618171777,3.59527763461689,5.40345124686736,3.98282546508734,15.9321036800589,12.3388393618507,7.88954149711563,12.8300336542548,13.3827216145662,13.1153983194896,11.5722862937391,8.41377843483732,6.12295038581362,5.79966670432462,1.48226313543574,13.1807633515714,11.7935397067922,11.4679677316275,10.5487263122022,8.44120059133459,9.93040821947537,6.61701116136864,11.1873306474774,8.78596522201861,4.31304619582064,8.93138274404408,3.43241440426017,3.28352541331245,6.63770430031075,1.92977408545347,3.8798169934987,11.9379589415405,9.77789858652155,11.712410918488,10.7957514212711,7.70528784232352,11.4260947625287,10.9274842800367,7.25121662888479,11.2946991720875,5.74037167166954,6.22680595919804,6.21665934717224,5.64131328467895,6.03165135757089,9.24639662491806,2.95058563811422,4.69092468718045,10.2752377592187,11.4867452860359,8.52461715958712,9.3414243065618,13.8823616543153,12.8844785617891,8.18608911384636,11.4705023017225,10.6943363559549,13.587673477864,9.31064613852257,11.1057226006299,8.69633111482352,8.03303291054518,4.25820255624806,16.9162323483892,15.9629220166505,6.43383479592888,2.65490276679926,17.7229864393136,21.4649725444973,13.3909606626688,7.97315110778086,8.30074899448604,15.5056975900933,13.4507479906677,9.9819265947722,5.05658812697306,4.21674434299995,5.15677716240934,10.2131881726136,14.4048875225048,20.1799546701097,16.7182887324642,13.8325382240973,23.9014215586775,17.7712942250291,26.4884505729701,14.3149741918863,21.183207086382,5.51320995137405,2.63818004706368,7.10443477461984,5.66941494324665,5.84924485615369,5.25250879184196,7.57850175237612,7.04616147639937,7.34744787430767,11.9704383418669,9.81530995059472,10.1718966782533,9.97867862363484,12.3540213531522,12.5784038195453,11.056164733569,11.1941978781583,0.954670618015114,8.38290382990009,10.9792512248498,10.2605073780711,8.15444354456428,11.1364907510551,7.01294601201068,6.4469695465762,5.49687478166462,6.09190374471426,6.21339313086926,86.2450196186811,10.6156747691225,10.2584264083401,9.52810822885833,13.949260935595,11.6579726588637,12.2051528191584,9.11430693907651,10.0664970648682,33.5801927948148,46.6608610137742,5.37218905067903,13.9880398550213,10.5792285879772,10.3936658382236,8.23522800070415,9.13934231993819,9.37524506255757,9.30444021199837,9.28891339522958,10.21171209177,11.0908803650525,8.47883562435846,7.88937101450702,9.23327527234395,3.62768613784338,21.9766093840324,18.0324851785046,16.1169231709515,4.25017106870819,5.63047426353546,4.76194223094889,5.57357785605571,7.02200945649509,3.95326289831947,5.06357760157895,2.29158205375759,7.90524638780963,7.53590771747707,6.7985450765073,4.72515750162264,7.20513925158753,1.35942722695261,2.5888015587591,8.09541311156578,7.98049746802062,14.000155671839,7.77941494618541,7.96530017986333,9.00833191405069,8.88986911206461,10.3017528619447,10.2694147069381,12.8875577999537,8.61829619626815,6.97917463128482,12.3606789860245,10.5641501468034,8.90249768812006,10.4784612082276,9.38663040153329,8.29509647993932,12.7746629249025,11.1871179302142,12.0004238334895,12.4233064311536,10.2527561677348,9.30217066446903,8.75217237862575,10.1537529470012,12.073246209603,10.7858581689516,10.7285249938231,8.41713407486608,11.2703267217965,13.6921230502033,9.41231399290286,8.6764631064141,12.9247429357365,12.4905288968973,11.462648813825,8.37997110788363,9.56441660344217,12.1325280515734,7.65163857547391 | |phase1_expression=20.979498970728,5.93258192986914,4.54999239389536,5.14189159221611,10.0179145989269,6.21153306073992,9.81173090501208,4.00282302668886,1.267098499365,1.40438715793196,1.02730780935303,2.47293692885543,3.25281386869291,2.36035086531293,19.3203661853084,10.1237633694913,13.2916756844348,9.62159604342625,7.95263714913285,9.33657233955666,7.99406927420056,14.4964788753293,13.3211892460857,7.1996590257033,10.0940083669555,8.03924749761028,8.18447792702242,7.54149314400612,8.93110071444957,5.04060259519861,8.42575940490158,10.1604907753541,6.76571266343027,0,8.08784535303569,9.64160943079256,9.59595974433135,5.85944283031671,12.5013655123808,5.23523743973798,8.82347232046521,8.19654581950135,7.76816564849846,5.03587271902309,7.09638518536602,8.07605709511399,32.0780451182696,19.6222640742402,17.5748946187577,17.8875507148341,13.9986421625363,30.188038516644,9.2280433331755,1.45072428402269,3.02484419228218,11.0621557495457,15.1862723167541,6.70373719960675,29.3358868246417,21.6886301501533,25.3532561402472,22.3637391165627,24.0109594950008,21.5975932147536,17.7995945262055,18.4724829885986,19.7736072942147,31.1216827310459,24.8855069540346,27.6762173579966,23.5563956713548,29.9933533623994,25.3998822094356,25.2331046382805,21.5652309791032,33.0918763179608,24.2254938198655,14.4286692036262,13.5173749265494,25.190280956467,25.6165402086747,20.8365348222704,21.4970909231063,20.2594539611405,15.279824777681,20.6240009831567,18.6506901846825,19.9447407033072,6.36100023998746,6.57472572929034,6.95674772884027,6.88339101585109,3.39985666853875,5.93673510801599,5.19821133958135,6.72040330646003,7.16266542671934,3.40860645156115,4.41636207824877,5.65343319216544,24.5067550411424,14.115912515575,7.64415719119937,7.11066703153331,11.2575341325831,8.10751569520315,10.6160133453104,5.709193985953,1.55362730188303,3.71105347662062,10.0621489524359,10.0473607843007,8.99400439298628,7.68685466818375,6.23220147819235,5.02666365318702,15.8204779349999,2.74738778147832,8.84610551949874,10.676612096529,12.5879665522424,9.21262980956922,3.72783522436244,8.78342391034641,9.63454851341893,5.36459815938042,14.0183695671927,18.5969846607956,12.4528822531603,7.78911324905078,5.03250663100489,24.12563560567,3.82413504423008,4.34716277461562,9.55825004973976,7.78758062725237,15.2759045775474,8.21086006026614,5.05445516867349,3.78795340595653,14.8337304977482,19.0818746679783,12.0641626969584,12.6592046982001,12.5867523429957,11.6583485459213,13.2119431629218,4.39795730256327,12.287375597172,9.07709184805532,7.74184946321375,10.7405908889512,10.8438427197983,9.05455632957633,7.61393904709391,13.335295876839,11.2354109970118,10.0365683774739,13.924011470384,13.2560494422721,18.0585066185444,15.6653993471083,11.6004920436753,14.9540816128027,12.1871019181029,9.30135779001631,12.0723030629829,12.1435956061856,13.000228143165,11.984224877774,10.701082860053,11.9883989688773,9.44065495751518,8.99183005694491,3.36463917702604,11.936935035997,2.64335026387038,8.72686869989696,13.650448034255,13.4697269679054,9.79392706047909,8.26902450955704,9.33987784148455,11.7939888189787,7.59246498471219,13.3406153326449,13.3207660664143,11.3405189063456,9.35827618171777,3.59527763461689,5.40345124686736,3.98282546508734,15.9321036800589,12.3388393618507,7.88954149711563,12.8300336542548,13.3827216145662,13.1153983194896,11.5722862937391,8.41377843483732,6.12295038581362,5.79966670432462,1.48226313543574,13.1807633515714,11.7935397067922,11.4679677316275,10.5487263122022,8.44120059133459,9.93040821947537,6.61701116136864,11.1873306474774,8.78596522201861,4.31304619582064,8.93138274404408,3.43241440426017,3.28352541331245,6.63770430031075,1.92977408545347,3.8798169934987,11.9379589415405,9.77789858652155,11.712410918488,10.7957514212711,7.70528784232352,11.4260947625287,10.9274842800367,7.25121662888479,11.2946991720875,5.74037167166954,6.22680595919804,6.21665934717224,5.64131328467895,6.03165135757089,9.24639662491806,2.95058563811422,4.69092468718045,10.2752377592187,11.4867452860359,8.52461715958712,9.3414243065618,13.8823616543153,12.8844785617891,8.18608911384636,11.4705023017225,10.6943363559549,13.587673477864,9.31064613852257,11.1057226006299,8.69633111482352,8.03303291054518,4.25820255624806,16.9162323483892,15.9629220166505,6.43383479592888,2.65490276679926,17.7229864393136,21.4649725444973,13.3909606626688,7.97315110778086,8.30074899448604,15.5056975900933,13.4507479906677,9.9819265947722,5.05658812697306,4.21674434299995,5.15677716240934,10.2131881726136,14.4048875225048,20.1799546701097,16.7182887324642,13.8325382240973,23.9014215586775,17.7712942250291,26.4884505729701,14.3149741918863,21.183207086382,5.51320995137405,2.63818004706368,7.10443477461984,5.66941494324665,5.84924485615369,5.25250879184196,7.57850175237612,7.04616147639937,7.34744787430767,11.9704383418669,9.81530995059472,10.1718966782533,9.97867862363484,12.3540213531522,12.5784038195453,11.056164733569,11.1941978781583,0.954670618015114,8.38290382990009,10.9792512248498,10.2605073780711,8.15444354456428,11.1364907510551,7.01294601201068,6.4469695465762,5.49687478166462,6.09190374471426,6.21339313086926,86.2450196186811,10.6156747691225,10.2584264083401,9.52810822885833,13.949260935595,11.6579726588637,12.2051528191584,9.11430693907651,10.0664970648682,33.5801927948148,46.6608610137742,5.37218905067903,13.9880398550213,10.5792285879772,10.3936658382236,8.23522800070415,9.13934231993819,9.37524506255757,9.30444021199837,9.28891339522958,10.21171209177,11.0908803650525,8.47883562435846,7.88937101450702,9.23327527234395,3.62768613784338,21.9766093840324,18.0324851785046,16.1169231709515,4.25017106870819,5.63047426353546,4.76194223094889,5.57357785605571,7.02200945649509,3.95326289831947,5.06357760157895,2.29158205375759,7.90524638780963,7.53590771747707,6.7985450765073,4.72515750162264,7.20513925158753,1.35942722695261,2.5888015587591,8.09541311156578,7.98049746802062,14.000155671839,7.77941494618541,7.96530017986333,9.00833191405069,8.88986911206461,10.3017528619447,10.2694147069381,12.8875577999537,8.61829619626815,6.97917463128482,12.3606789860245,10.5641501468034,8.90249768812006,10.4784612082276,9.38663040153329,8.29509647993932,12.7746629249025,11.1871179302142,12.0004238334895,12.4233064311536,10.2527561677348,9.30217066446903,8.75217237862575,10.1537529470012,12.073246209603,10.7858581689516,10.7285249938231,8.41713407486608,11.2703267217965,13.6921230502033,9.41231399290286,8.6764631064141,12.9247429357365,12.4905288968973,11.462648813825,8.37997110788363,9.56441660344217,12.1325280515734,7.65163857547391 | ||
|short_description=p2@Erp29 | |short_description=p2@Erp29 | ||
}} | }} |
Revision as of 21:55, 13 November 2012
Short description: | p2@Erp29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Erp29_5end |
Coexpression cluster: | MCL_coexpression_mm9:735 |
Association with transcript: | 0bp_to_ENSMUST00000052590, ENSMUST00000130451, ENSMUST00000153758, NM_026129, uc008zjd.1, uc008zjf.1, uc008zjg.1_5end |
EntrezGene: | Erp29 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.91e-16 | 44 |
neurectodermal cell | 4.91e-16 | 44 |
neural cell | 1.99e-15 | 43 |
CNS neuron (sensu Vertebrata) | 8.70e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.70e-14 | 23 |
neuron | 6.43e-13 | 33 |
neuronal stem cell | 6.43e-13 | 33 |
neuroblast | 6.43e-13 | 33 |
electrically signaling cell | 6.43e-13 | 33 |
electrically responsive cell | 2.14e-10 | 39 |
electrically active cell | 2.14e-10 | 39 |
embryonic cell | 4.25e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.28e-09 | 73 |
nervous system | 4.15e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.