FFCP PHASE1:Mm9::chr10:79568311..79568322,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:79568311..79568322,- | |id=chr10:79568311..79568322,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.14e-30,3;CL:0000239,1.26e-26,6;CL:0000677,1.26e-26,6;CL:0000584,1.26e-26,6;CL:0000075,6.69e-23,7;CL:0000066,4.07e-19,25;CL:0002563,6.35e-18,9;CL:0002251,6.35e-18,9;CL:0000473,3.08e-13,7;CL:0002076,6.38e-11,15;CL:0000223,2.82e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.55e-12!48;UBERON:0002390!5.39e-09!45;UBERON:0003061!5.39e-09!45;UBERON:0002405!6.46e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!8.55e-12!48;UBERON:0002390!5.39e-09!45;UBERON:0003061!5.39e-09!45;UBERON:0002405!6.46e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-23,15;UBERON:0001962,7.62e-20,2;UBERON:0001961,7.62e-20,2;UBERON:0001744,7.62e-20,2;UBERON:0003350,6.35e-18,9;UBERON:0004808,6.35e-18,9;UBERON:0001277,6.35e-18,9;UBERON:0000485,9.52e-15,11;UBERON:0004923,1.36e-14,24;UBERON:0002465,1.40e-13,3;UBERON:0001242,1.53e-12,13;UBERON:0001262,1.53e-12,13;UBERON:0004786,1.53e-12,13;UBERON:0003199,1.12e-10,1 | |||
|phase1_expression=0,5.23463111459042,8.18998630901165,0,0,3.69334398206158,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,2.87986361028132,1.37645568640302,3.44539178469012,3.87685796543167,3.44753972297422,0.190023419456374,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616265742988964,0.25984164595559,0.358053391334963,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.38983152295901,0.288635524920988,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0,5.23463111459042,8.18998630901165,0,0,3.69334398206158,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,2.87986361028132,1.37645568640302,3.44539178469012,3.87685796543167,3.44753972297422,0.190023419456374,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616265742988964,0.25984164595559,0.358053391334963,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.38983152295901,0.288635524920988,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr10:79568311..79568322,- | |short_description=p@chr10:79568311..79568322,- | ||
}} | }} |
Revision as of 11:07, 14 November 2012
Short description: | p@chr10:79568311..79568322, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79568311..79568322, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.14e-30 | 3 |
brush border epithelial cell | 1.26e-26 | 6 |
gut absorptive cell | 1.26e-26 | 6 |
enterocyte | 1.26e-26 | 6 |
columnar/cuboidal epithelial cell | 6.69e-23 | 7 |
epithelial cell | 4.07e-19 | 25 |
intestinal epithelial cell | 6.35e-18 | 9 |
epithelial cell of alimentary canal | 6.35e-18 | 9 |
defensive cell | 3.08e-13 | 7 |
endo-epithelial cell | 6.38e-11 | 15 |
endodermal cell | 2.82e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.69e-23 | 15 |
gut-associated lymphoid tissue | 7.62e-20 | 2 |
mucosa-associated lymphoid tissue | 7.62e-20 | 2 |
lymphoid tissue | 7.62e-20 | 2 |
epithelium of mucosa | 6.35e-18 | 9 |
gastrointestinal system epithelium | 6.35e-18 | 9 |
intestinal epithelium | 6.35e-18 | 9 |
simple columnar epithelium | 9.52e-15 | 11 |
organ component layer | 1.36e-14 | 24 |
lymphoid system | 1.40e-13 | 3 |
intestinal mucosa | 1.53e-12 | 13 |
wall of intestine | 1.53e-12 | 13 |
gastrointestinal system mucosa | 1.53e-12 | 13 |
egg chamber | 1.12e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.