FFCP PHASE1:Mm9::chr18:11430214..11430220,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr18:11430214..11430220,+ | |id=chr18:11430214..11430220,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.45e-41!9;CL:0002251!2.45e-41!9;CL:0000075!8.14e-41!7;CL:0000239!1.29e-35!6;CL:0000677!1.29e-35!6;CL:0000212!1.29e-35!6;CL:0000584!1.29e-35!6;CL:0002076!1.51e-24!15;CL:0000223!3.13e-18!20;CL:0000066!4.11e-18!25;CL:0002250!1.21e-08!3;CL:0000063!8.76e-08!66;CL:0000057!1.83e-07!1;CL:0000632!1.83e-07!1;CL:0000710!8.26e-07!1;CL:0002077!8.26e-07!1;CL:0005014!8.26e-07!1;CL:0002315!8.26e-07!1;CL:0002490!8.26e-07!1 | |ontology_enrichment_celltype=CL:0002563!2.45e-41!9;CL:0002251!2.45e-41!9;CL:0000075!8.14e-41!7;CL:0000239!1.29e-35!6;CL:0000677!1.29e-35!6;CL:0000212!1.29e-35!6;CL:0000584!1.29e-35!6;CL:0002076!1.51e-24!15;CL:0000223!3.13e-18!20;CL:0000066!4.11e-18!25;CL:0002250!1.21e-08!3;CL:0000063!8.76e-08!66;CL:0000057!1.83e-07!1;CL:0000632!1.83e-07!1;CL:0000710!8.26e-07!1;CL:0002077!8.26e-07!1;CL:0005014!8.26e-07!1;CL:0002315!8.26e-07!1;CL:0002490!8.26e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.10e-20,6;CL:0000677,3.10e-20,6;CL:0000584,3.10e-20,6;CL:0000075,1.59e-17,7;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.29e-47!15;UBERON:0000485!2.87e-42!11;UBERON:0003350!2.45e-41!9;UBERON:0004808!2.45e-41!9;UBERON:0001277!2.45e-41!9;UBERON:0001242!3.23e-36!13;UBERON:0000060!3.23e-36!13;UBERON:0001262!3.23e-36!13;UBERON:0004786!3.23e-36!13;UBERON:0004923!8.43e-29!24;UBERON:0001962!7.29e-13!2;UBERON:0001961!7.29e-13!2;UBERON:0001744!7.29e-13!2;UBERON:0000160!2.80e-10!43;UBERON:0002465!7.10e-09!3;UBERON:0000490!8.76e-08!66;UBERON:0003929!8.94e-08!55;UBERON:0005409!3.37e-07!59;UBERON:0000064!3.65e-07!99;UBERON:0003199!4.21e-07!1 | |ontology_enrichment_uberon=UBERON:0000344!9.29e-47!15;UBERON:0000485!2.87e-42!11;UBERON:0003350!2.45e-41!9;UBERON:0004808!2.45e-41!9;UBERON:0001277!2.45e-41!9;UBERON:0001242!3.23e-36!13;UBERON:0000060!3.23e-36!13;UBERON:0001262!3.23e-36!13;UBERON:0004786!3.23e-36!13;UBERON:0004923!8.43e-29!24;UBERON:0001962!7.29e-13!2;UBERON:0001961!7.29e-13!2;UBERON:0001744!7.29e-13!2;UBERON:0000160!2.80e-10!43;UBERON:0002465!7.10e-09!3;UBERON:0000490!8.76e-08!66;UBERON:0003929!8.94e-08!55;UBERON:0005409!3.37e-07!59;UBERON:0000064!3.65e-07!99;UBERON:0003199!4.21e-07!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0004923,6.63e-12,24;UBERON:0000485,1.36e-11,11;UBERON:0000331,4.56e-11,3;UBERON:0002116,4.56e-11,3;UBERON:0001204,4.56e-11,3;UBERON:0001168,4.56e-11,3;UBERON:0000160,1.87e-09,31;UBERON:0002108,1.23e-08,4 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,2.72217790176147,3.00537437967808,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0,0,0,5.32065574477847,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,2.72217790176147,3.00537437967808,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0,0,0,5.32065574477847,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:11430214..11430220,+ | |short_description=p@chr18:11430214..11430220,+ | ||
}} | }} |
Revision as of 13:01, 14 November 2012
Short description: | p@chr18:11430214..11430220, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:11430214..11430220, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.10e-20 | 6 |
gut absorptive cell | 3.10e-20 | 6 |
enterocyte | 3.10e-20 | 6 |
columnar/cuboidal epithelial cell | 1.59e-17 | 7 |
intestinal epithelial cell | 6.62e-14 | 9 |
epithelial cell of alimentary canal | 6.62e-14 | 9 |
endo-epithelial cell | 8.43e-09 | 15 |
endodermal cell | 7.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.26e-21 | 13 |
wall of intestine | 5.26e-21 | 13 |
gastrointestinal system mucosa | 5.26e-21 | 13 |
mucosa | 2.29e-18 | 15 |
epithelium of mucosa | 6.62e-14 | 9 |
gastrointestinal system epithelium | 6.62e-14 | 9 |
intestinal epithelium | 6.62e-14 | 9 |
organ component layer | 6.63e-12 | 24 |
simple columnar epithelium | 1.36e-11 | 11 |
ileal mucosa | 4.56e-11 | 3 |
ileum | 4.56e-11 | 3 |
mucosa of small intestine | 4.56e-11 | 3 |
wall of small intestine | 4.56e-11 | 3 |
intestine | 1.87e-09 | 31 |
small intestine | 1.23e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.