NonredundantMotifs:160: Difference between revisions
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|entrez_gene_id=7008
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TEF_f1
|name=known160
|representative_motif_db=HOCOMOCO
|representative_motif_id=TE...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.6764705882352936;1.852941176470594;0.6764705882352936;10.794117647058815!2;2.117647058823534;0.0;10.705882352941174;1.1764705882352948!3;3.176470588235294;1.0588235294117643;2.9411764705882297;6.823529411764702!4;0.0;0.0;0.0;14.0!5;3.176470588235294;0.0;3.4117647058823577;7.411764705882348!6;13.17647058823529;0.0;0.8235294117647057;0.0!7;1.0588235294117643;3.8823529411764723;0.0;9.058823529411768!8;4.352941176470586;0.0;8.823529411764705;0.8235294117647057!9;0.0;0.5882352941176474;2.117647058823534;11.29411764705882!10;8.705882352941172;3.4117647058823577;1.0588235294117643;0.8235294117647057!11;9.764705882352946;0.0;2.117647058823534;2.117647058823534!12;5.999999999999992;4.352941176470586;2.588235294117648;1.0588235294117643!13;0.5882352941176474;2.8235294117647123;2.117647058823534;8.470588235294121!14;2.529411764705882;0.4117647058823522;5.94117647058824;5.11764705882353 | |||
|entrez_gene_id=7008 | |entrez_gene_id=7008 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TEF_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:TEF_f1 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known160
- db :HOCOMOCO
- Id :TEF_f1
- name :
- score :0.06128254407081912
- External refs:
- Internal refs:
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Sub Motif Members
