FFCP PHASE1:Hg19::chr12:50616122..50616144,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51474|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24636|TSSclassifier=S|UniProt=F8VQE1|association_with_transcript=0bp_to_ENST00000552823,ENST00000552909_5end|coexpression_cluster_id=C3288|description=CAGE_peak_3_at_LIMA1_5end|id=chr12:50616122..50616144,-|ontology_enrichment_celltype=CL:0000055!1.56e-14!180;CL:0000057!3.28e-12!75;CL:0000220!3.81e-08!246;CL:0002321!7.79e-08!248;CL:0000077!1.01e-07!19;CL:0002620!6.62e-07!23|ontology_enrichment_celltype_v019=CL:0000077;3.21e-10;19!CL:0002620;2.41e-07;23|ontology_enrichment_celltype_v019_2=CL:0000057,1.77e-11,76;CL:0000077,4.68e-10,19;CL:0002620,2.63e-07,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.93e-07!95;UBERON:0002097!7.74e-07!40|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.77e-10,99;UBERON:0002097,5.15e-08,41;UBERON:0002199,6.56e-07,46;UBERON:0002416,6.56e-07,46|phase1_expression=0.908391896352783,1.49870366723688,1.83240725324762,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,0.245733936501509,0,0.218441372130172,1.05506791291381,1.48519623552056,1.32558950291166,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,1.43117993565528,0.684372125364421,0.753255837568817,0.764134057479513,0.246301768349837,0.708397031823113,0,0,0,0,1.50602959389125,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.501559486172034,0,0,0,2.67385096524417,0.294605907474837,0.443067789167242,0.270803863765016,1.28091319725675,1.1705341280389,0,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.793165398882963,0.383220493601921,0.34362744548263,0,0.637130828648193,0,0,0.451725357233318,0.76791966692651,1.24930726552346,0,0,0,0,0.144824403882799,0,1.34140171940727,1.2786256184353,2.1686349143074,1.00267582127178,2.02785126545153,2.3858578411533,0.973269740605272,0.283604451492204,0.443458794925128,0,0.0654895377488563,0.364295288292542,0,0.97364218096405,1.56716763569341,1.19662164466979,0,0,0,0.198762407366705,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0.71153252537342,0.66944122552934,0.805658634218294,1.52054421143703,0.24406205754817,1.47065232138347,0,0.535798369704479,0,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,1.98788780678127,1.8994576749687,9.53346101855175,2.86836620748814,1.06400514659507,0.560677600142307,2.1349799145941,0.24666754841716,2.48968828319813,0.404132016209064,0.653847612453835,0.605429710579726,1.15235184896,0.234321431833797,0.936480230490962,0.570471821544449,0.298897361103602,0,0,0.421352420106746,0.816616685019573,0.737005903870608,0.723280468230358,3.56400857184616,4.20353779773547,0.910161361938026,0,0.505008341862199,0.375355559615893,2.49357703935765,2.63386572528503,1.5324389789951,1.05166641234618,0.567160915800105,7.89314397030993,4.48470516518992,3.60284231971255,5.10154863343484,5.77094163735258,7.21393512127762,1.67505170698431,6.07594796068558,3.02054715999716,7.82544700156755,3.86609574297657,1.13152239773168,7.10019185033229,3.32481924151213,2.54340888465731,7.53717327336858,7.0913991353617,7.1701148847251,0.121973706129595,0,0.232387885739037,0,0,0,1.56449532329816,0,0,2.3218396401599,0,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,0.653638332277218,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,1.20097467208968,6.58501712451753,0,3.9206299240536,1.574003567695,0,0,0,0,0.469634776943287,1.15493158208859,0.462985512576611,0.951270761172991,0,0,0,0,0,10.3107217385455,10.2469098201304,5.81277898693785,5.46306988487375,2.90633938513962,1.15014803749563,0.492663237895943,0.264145302039678,0,0,0,0.063497894292169,0,0,0,0.514137463516618,1.50171528921959,0,0.336393253036082,0.43596006883328,0.4400297149257,1.68053230485111,0,0,1.59562869950922,0,0,0,0.532844358032199,1.57275793023962,1.08524321078289,0,0.325736184293735,1.42156779497018,0,9.04318131178758,6.10073421020206,6.09835246210548,0,0,0,1.4377491329495,2.29723871668228,1.42636905040718,2.60606352001643,1.02738161275192,0.895304816199478,0.112085143993527,0,0,0.128343036279748,5.59008173289419,0,0.773288812777695,0,1.27587750330633,0,0,0,0.736148950314839,2.00068208423871,0,2.70362119990049,4.81758269752337,3.6271555457805,2.6942525448324,1.20378439891088,2.27407504055985,0,0.664225598535437,0.737476674166813,1.73767228936166,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,0,0,3.2254015016441,7.21271274453894,0.841980283299221,3.84417447767103,4.09365799253363,1.60853921143608,1.48418066444991,0.925258162815933,1.24293207719189,1.47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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24636 | |||
|TSSclassifier=S | |||
|UniProt=F8VQE1 | |||
|association_with_transcript=0bp_to_ENST00000552823,ENST00000552909_5end | |||
|coexpression_cluster_id=C3288 | |||
|description=CAGE_peak_3_at_LIMA1_5end | |||
|id=chr12:50616122..50616144,- | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-14!180;CL:0000057!3.28e-12!75;CL:0000220!3.81e-08!246;CL:0002321!7.79e-08!248;CL:0000077!1.01e-07!19;CL:0002620!6.62e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.21e-10;19!CL:0002620;2.41e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.77e-11,76;CL:0000077,4.68e-10,19;CL:0002620,2.63e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.93e-07!95;UBERON:0002097!7.74e-07!40 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.77e-10,99;UBERON:0002097,5.15e-08,41;UBERON:0002199,6.56e-07,46;UBERON:0002416,6.56e-07,46 | |||
|phase1_expression=0.908391896352783,1.49870366723688,1.83240725324762,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,0.245733936501509,0,0.218441372130172,1.05506791291381,1.48519623552056,1.32558950291166,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,1.43117993565528,0.684372125364421,0.753255837568817,0.764134057479513,0.246301768349837,0.708397031823113,0,0,0,0,1.50602959389125,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.501559486172034,0,0,0,2.67385096524417,0.294605907474837,0.443067789167242,0.270803863765016,1.28091319725675,1.1705341280389,0,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.793165398882963,0.383220493601921,0.34362744548263,0,0.637130828648193,0,0,0.451725357233318,0.76791966692651,1.24930726552346,0,0,0,0,0.144824403882799,0,1.34140171940727,1.2786256184353,2.1686349143074,1.00267582127178,2.02785126545153,2.3858578411533,0.973269740605272,0.283604451492204,0.443458794925128,0,0.0654895377488563,0.364295288292542,0,0.97364218096405,1.56716763569341,1.19662164466979,0,0,0,0.198762407366705,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0.71153252537342,0.66944122552934,0.805658634218294,1.52054421143703,0.24406205754817,1.47065232138347,0,0.535798369704479,0,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,1.98788780678127,1.8994576749687,9.53346101855175,2.86836620748814,1.06400514659507,0.560677600142307,2.1349799145941,0.24666754841716,2.48968828319813,0.404132016209064,0.653847612453835,0.605429710579726,1.15235184896,0.234321431833797,0.936480230490962,0.570471821544449,0.298897361103602,0,0,0.421352420106746,0.816616685019573,0.737005903870608,0.723280468230358,3.56400857184616,4.20353779773547,0.910161361938026,0,0.505008341862199,0.375355559615893,2.49357703935765,2.63386572528503,1.5324389789951,1.05166641234618,0.567160915800105,7.89314397030993,4.48470516518992,3.60284231971255,5.10154863343484,5.77094163735258,7.21393512127762,1.67505170698431,6.07594796068558,3.02054715999716,7.82544700156755,3.86609574297657,1.13152239773168,7.10019185033229,3.32481924151213,2.54340888465731,7.53717327336858,7.0913991353617,7.1701148847251,0.121973706129595,0,0.232387885739037,0,0,0,1.56449532329816,0,0,2.3218396401599,0,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,0.653638332277218,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,1.20097467208968,6.58501712451753,0,3.9206299240536,1.574003567695,0,0,0,0,0.469634776943287,1.15493158208859,0.462985512576611,0.951270761172991,0,0,0,0,0,10.3107217385455,10.2469098201304,5.81277898693785,5.46306988487375,2.90633938513962,1.15014803749563,0.492663237895943,0.264145302039678,0,0,0,0.063497894292169,0,0,0,0.514137463516618,1.50171528921959,0,0.336393253036082,0.43596006883328,0.4400297149257,1.68053230485111,0,0,1.59562869950922,0,0,0,0.532844358032199,1.57275793023962,1.08524321078289,0,0.325736184293735,1.42156779497018,0,9.04318131178758,6.10073421020206,6.09835246210548,0,0,0,1.4377491329495,2.29723871668228,1.42636905040718,2.60606352001643,1.02738161275192,0.895304816199478,0.112085143993527,0,0,0.128343036279748,5.59008173289419,0,0.773288812777695,0,1.27587750330633,0,0,0,0.736148950314839,2.00068208423871,0,2.70362119990049,4.81758269752337,3.6271555457805,2.6942525448324,1.20378439891088,2.27407504055985,0,0.664225598535437,0.737476674166813,1.73767228936166,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,0,0,3.2254015016441,7.21271274453894,0.841980283299221,3.84417447767103,4.09365799253363,1.60853921143608,1.48418066444991,0.925258162815933,1.24293207719189,1.47828880824856,2.07701771673448,1.16210378459959,0,5.61418116849198,1.19705285616665,1.26295892981067,1.27463817604702,1.44236856455367,0,0.0770153371044148,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0.915694648183434,0.495056999523528,2.87132768998086,1.95018073810956,3.21367859688319,0.676695028044854,0.924291702687866,0.614014698904518,1.10269257987624,0.859361958946189,0.290033387828457,0.255679882248303,1.78064071293475,7.60310610660499,4.80475168412765,4.72167036229961,2.023155617111,2.32422774648643,5.35180989612088,0.6970372701606,0,2.12922412126809,0.869932992075073,0.37064843820784,1.28812398067792,1.48863347743867,1.58189712359363,1.5250415513906,0.255897791311334,2.1396949401696,0.636406495851874,0,1.79872457583315,1.37268514868027,1.41374882814824,1.2130948894399,1.58510321173008,0.842516912477962,0,0.974853958525138,1.05650146756755,1.63799893689583,1.1312434556297,0,0,0,0.876901770507525,0,0.655894752046633,0.202910376962704,0.30982349809975,0.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| |||
|short_description=p3@LIMA1 | |||
}} |
Revision as of 22:59, 10 September 2013
Short description: | p3@LIMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LIMA1_5end |
Coexpression cluster: | C3288_Fibroblast_Urothelial_Preadipocyte_mesothelioma_Mallassezderived_Mesothelial_alveolar |
Association with transcript: | 0bp_to_ENST00000552823, ENST00000552909_5end |
EntrezGene: | LIMA1 |
HGNC: | 24636 |
UniProt: | F8VQE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.77e-11 | 76 |
mesothelial cell | 4.68e-10 | 19 |
skin fibroblast | 2.63e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.77e-10 | 99 |
skin of body | 5.15e-08 | 41 |
integument | 6.56e-07 | 46 |
integumental system | 6.56e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.