FFCP PHASE1:Hg19::chr12:53201596..53201607,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3851|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=6441|TSSclassifier=S|UniProt=Q6PIN2|association_with_transcript=-38bp_to_BC032132_5end|coexpression_cluster_id=C60|description=CAGE_peak_7_at_KRT4_5end|id=chr12:53201596..53201607,-|ontology_enrichment_celltype=CL:0000322!8.15e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009143;1.88e-50;1!UBERON:0008814;7.14e-26;2!UBERON:0010056;7.14e-26;2|ontology_enrichment_disease=DOID:3910!1.33e-09!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001723!3.29e-23!3;UBERON:0001033!3.29e-23!3;UBERON:0010056!3.29e-23!3;UBERON:0002372!4.44e-18!1;UBERON:0001961!4.44e-18!1;UBERON:0001744!4.44e-18!1;UBERON:0001735!4.44e-18!1;UBERON:0000997!1.22e-17!1;UBERON:0005056!1.22e-17!1;UBERON:0001042!1.11e-15!10;UBERON:0009145!1.11e-15!10;UBERON:0006562!2.57e-14!11;UBERON:0000341!8.69e-10!2;UBERON:0004903!1.33e-09!2;UBERON:0002173!1.33e-09!2;UBERON:0002186!1.33e-09!2;UBERON:0003127!1.86e-09!2;UBERON:0000072!4.59e-09!46;UBERON:0000078!5.53e-09!18;UBERON:0001557!1.53e-08!19;UBERON:0000065!7.24e-08!53;UBERON:0000166!8.87e-08!21;UBERON:0004821!8.15e-07!3;UBERON:0003215!8.15e-07!3;UBERON:0002299!8.15e-07!3;UBERON:0006524!8.15e-07!3;UBERON:0008874!8.15e-07!3;UBERON:0002169!8.15e-07!3;UBERON:0004894!8.15e-07!3|ontology_enrichment_uberon_v019=UBERON:0002372;6.58e-50;1!UBERON:0001961;6.58e-50;1!UBERON:0001744;6.58e-50;1!UBERON:0001042;6.58e-50;1!UBERON:0001735;6.58e-50;1!UBERON:0000341;4.90e-26;2!UBERON:0006562;9.18e-26;2!UBERON:0001043;7.35e-18;3!UBERON:0001723;9.46e-18;3!UBERON:0001033;9.46e-18;3!UBERON:0000974;1.27e-09;6!UBERON:0000165;4.21e-08;28|ontology_enrichment_uberon_v019_2=UBERON:0002372,6.58e-50,1;UBERON:0001961,6.58e-50,1;UBERON:0001744,6.58e-50,1;UBERON:0001735,6.58e-50,1;UBERON:0000341,5.56e-26,2;UBERON:0001042,1.04e-20,10;UBERON:0009145,1.04e-20,10;UBERON:0006562,6.17e-19,11;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0001723,9.46e-18,3;UBERON:0001033,9.46e-18,3;UBERON:0010056,9.46e-18,3;UBERON:0001557,1.91e-11,19;UBERON:0000166,4.96e-10,22;UBERON:0000153,4.61e-08,62;UBERON:0007811,4.61e-08,62;UBERON:0000165,7.40e-08,29;UBERON:0000930,7.40e-08,29;UBERON:0007023,8.86e-08,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,5.72235197281675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5440835294255,0,0,0,0,0,0,2.17716747896961,0.342233301085281,1.21233695426258,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@KRT4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6441 | |||
|TSSclassifier=S | |||
|UniProt=Q6PIN2 | |||
|association_with_transcript=-38bp_to_BC032132_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_7_at_KRT4_5end | |||
|id=chr12:53201596..53201607,- | |||
|ontology_enrichment_celltype=CL:0000322!8.15e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-50;1!UBERON:0008814;7.14e-26;2!UBERON:0010056;7.14e-26;2 | |||
|ontology_enrichment_disease=DOID:3910!1.33e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.29e-23!3;UBERON:0001033!3.29e-23!3;UBERON:0010056!3.29e-23!3;UBERON:0002372!4.44e-18!1;UBERON:0001961!4.44e-18!1;UBERON:0001744!4.44e-18!1;UBERON:0001735!4.44e-18!1;UBERON:0000997!1.22e-17!1;UBERON:0005056!1.22e-17!1;UBERON:0001042!1.11e-15!10;UBERON:0009145!1.11e-15!10;UBERON:0006562!2.57e-14!11;UBERON:0000341!8.69e-10!2;UBERON:0004903!1.33e-09!2;UBERON:0002173!1.33e-09!2;UBERON:0002186!1.33e-09!2;UBERON:0003127!1.86e-09!2;UBERON:0000072!4.59e-09!46;UBERON:0000078!5.53e-09!18;UBERON:0001557!1.53e-08!19;UBERON:0000065!7.24e-08!53;UBERON:0000166!8.87e-08!21;UBERON:0004821!8.15e-07!3;UBERON:0003215!8.15e-07!3;UBERON:0002299!8.15e-07!3;UBERON:0006524!8.15e-07!3;UBERON:0008874!8.15e-07!3;UBERON:0002169!8.15e-07!3;UBERON:0004894!8.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;6.58e-50;1!UBERON:0001961;6.58e-50;1!UBERON:0001744;6.58e-50;1!UBERON:0001042;6.58e-50;1!UBERON:0001735;6.58e-50;1!UBERON:0000341;4.90e-26;2!UBERON:0006562;9.18e-26;2!UBERON:0001043;7.35e-18;3!UBERON:0001723;9.46e-18;3!UBERON:0001033;9.46e-18;3!UBERON:0000974;1.27e-09;6!UBERON:0000165;4.21e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,6.58e-50,1;UBERON:0001961,6.58e-50,1;UBERON:0001744,6.58e-50,1;UBERON:0001735,6.58e-50,1;UBERON:0000341,5.56e-26,2;UBERON:0001042,1.04e-20,10;UBERON:0009145,1.04e-20,10;UBERON:0006562,6.17e-19,11;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0001723,9.46e-18,3;UBERON:0001033,9.46e-18,3;UBERON:0010056,9.46e-18,3;UBERON:0001557,1.91e-11,19;UBERON:0000166,4.96e-10,22;UBERON:0000153,4.61e-08,62;UBERON:0007811,4.61e-08,62;UBERON:0000165,7.40e-08,29;UBERON:0000930,7.40e-08,29;UBERON:0007023,8.86e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,5.72235197281675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5440835294255,0,0,0,0,0,0,2.17716747896961,0.342233301085281,1.21233695426258,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@KRT4 | |||
}} |
Revision as of 23:13, 10 September 2013
Short description: | p7@KRT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KRT4_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -38bp_to_BC032132_5end |
EntrezGene: | KRT4 |
HGNC: | 6441 |
UniProt: | Q6PIN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 6.58e-50 | 1 |
mucosa-associated lymphoid tissue | 6.58e-50 | 1 |
lymphoid tissue | 6.58e-50 | 1 |
tonsillar ring | 6.58e-50 | 1 |
throat | 5.56e-26 | 2 |
chordate pharynx | 1.04e-20 | 10 |
pharyngeal region of foregut | 1.04e-20 | 10 |
pharynx | 6.17e-19 | 11 |
esophagus | 6.76e-18 | 3 |
esophageal region | 6.76e-18 | 3 |
tongue | 9.46e-18 | 3 |
gustatory system | 9.46e-18 | 3 |
future tongue | 9.46e-18 | 3 |
upper respiratory tract | 1.91e-11 | 19 |
oral opening | 4.96e-10 | 22 |
anterior region of body | 4.61e-08 | 62 |
craniocervical region | 4.61e-08 | 62 |
mouth | 7.40e-08 | 29 |
stomodeum | 7.40e-08 | 29 |
adult organism | 8.86e-08 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.