FFCP PHASE1:Hg19::chr16:69746953..69746965,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3588|description=CAGE_peak_at_chr16:69746953..69746965,-|id=chr16:69746953..69746965,-|ontology_enrichment_celltype=CL:0000548!3.78e-16!679;CL:0000004!3.78e-16!679;CL:0000255!3.78e-16!679;CL:0000012!1.22e-15!682;CL:0000220!1.82e-14!246;CL:0002321!2.40e-14!248;CL:0000066!1.14e-13!254;CL:0000055!3.54e-13!180;CL:0000057!4.72e-11!75;CL:0000003!8.84e-10!722;CL:0000063!2.72e-09!578;CL:0000222!4.25e-08!119;CL:0000144!1.72e-07!625|ontology_enrichment_celltype_v019=CL:0000499;2.30e-10;28!CL:0000346;7.63e-09;3!CL:1000428;7.63e-09;3!CL:0000135;8.46e-09;3!CL:0000388;8.46e-09;3|ontology_enrichment_celltype_v019_2=CL:0000499,3.92e-10,28;CL:0000346,6.46e-09,3;CL:1000428,6.46e-09,3;CL:0000135,1.06e-08,3;CL:0000388,1.06e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.72e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!2.87e-08!95;UBERON:0000914!2.92e-08!83;UBERON:0002329!2.92e-08!83;UBERON:0003077!2.92e-08!83;UBERON:0003059!2.92e-08!83;UBERON:0007282!2.92e-08!83;UBERON:0009618!2.92e-08!83;UBERON:0007285!2.92e-08!83;UBERON:0004290!7.22e-08!70;UBERON:0000486!9.64e-08!82;UBERON:0002199!5.79e-07!45;UBERON:0002416!5.79e-07!45;UBERON:0002097!6.45e-07!40;UBERON:0000490!7.77e-07!138|ontology_enrichment_uberon_v019=UBERON:0000412;7.63e-09;3!UBERON:0001992;7.63e-09;3!UBERON:0007846;8.46e-09;3!UBERON:0000043;8.46e-09;3!UBERON:0007845;8.46e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0000412,6.46e-09,3;UBERON:0001992,6.46e-09,3;UBERON:0007846,1.06e-08,3;UBERON:0000043,1.06e-08,3;UBERON:0007845,1.06e-08,3|phase1_expression=0.181678379270557,2.5692062866918,0,2.00146596706261,1.34088328328186,0,0,0,0.522371256399677,0,0,0,0,0,0.662794751455832,2.01697543935533,1.20538905604795,0.730310090387373,1.46379839637152,0,0.204000691244253,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,2.75826367343678,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.0843174571537,1.00267582127178,2.31754430337318,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0,0.364295288292542,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,1.37559020970034,0,0.775250277507987,0,0,0,0,0,0,0,0.446498641420399,0,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0,0.506522046658319,0,0.286836620748814,0.709336764396714,1.68203280042692,0,0.49333509683432,0,0.942974704487816,0,0.908144565869588,0.576175924479999,0.234321431833797,0,0.570471821544449,0.448346041655403,1.29177948508141,0.485618833104395,0.421352420106746,0.408308342509787,1.35117749042945,0.723280468230358,0,5.43987244412825,0,0,0,0.250237039743928,0,0,4.29082914118628,0.600952235626387,0.453728732640084,0.89694817844431,0,0.211931901159562,0.900273288253207,0.92747276314595,1.54584324027377,0.744467425326359,0.168776332241266,0.389748020644795,0,0.276149695926898,1.45481451136931,0.355009592516614,0.604512589365842,0.67824236924195,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,4.69348596989448,5.78916844373597,1.38134921352481,0.928735856063958,0,1.0647612003586,1.34867752062481,0.241011029883482,0.772057809126758,0.871517776369625,0.237270619111097,0.674156540800822,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,3.11980435583874,2.88662684050547,0,0,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,3.90744472272629,0.901029173531752,1.14330573052231,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.799266537048298,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0.718874566474748,0,0,0.434343920002738,3.49309748335652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.831883446123229,9.09987842865525,1.73472656537328,0.937131319941706,0,0,0,0,0.184369168541703,1.12948698808508,0.783204629850962,0,0,0,0,0,0,0,0,0.306923946576125,1.40330047216537,0.256278298511402,1.02341449813341,0.160853921143607,1.48418066444991,0.308419387605311,0.532685175939381,0,1.55776328755086,2.78904908303902,0.120859449591622,0.601519410909855,0,0.574072240823034,2.00300284807389,2.09799063935079,0,0,0,0,0.105551628892876,1.13733384070897,1.53084334748864,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0.08250949992058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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3588 | |||
|description=CAGE_peak_at_chr16:69746953..69746965,- | |||
|id=chr16:69746953..69746965,- | |||
|ontology_enrichment_celltype=CL:0000548!3.78e-16!679;CL:0000004!3.78e-16!679;CL:0000255!3.78e-16!679;CL:0000012!1.22e-15!682;CL:0000220!1.82e-14!246;CL:0002321!2.40e-14!248;CL:0000066!1.14e-13!254;CL:0000055!3.54e-13!180;CL:0000057!4.72e-11!75;CL:0000003!8.84e-10!722;CL:0000063!2.72e-09!578;CL:0000222!4.25e-08!119;CL:0000144!1.72e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000499;2.30e-10;28!CL:0000346;7.63e-09;3!CL:1000428;7.63e-09;3!CL:0000135;8.46e-09;3!CL:0000388;8.46e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,3.92e-10,28;CL:0000346,6.46e-09,3;CL:1000428,6.46e-09,3;CL:0000135,1.06e-08,3;CL:0000388,1.06e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.72e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.87e-08!95;UBERON:0000914!2.92e-08!83;UBERON:0002329!2.92e-08!83;UBERON:0003077!2.92e-08!83;UBERON:0003059!2.92e-08!83;UBERON:0007282!2.92e-08!83;UBERON:0009618!2.92e-08!83;UBERON:0007285!2.92e-08!83;UBERON:0004290!7.22e-08!70;UBERON:0000486!9.64e-08!82;UBERON:0002199!5.79e-07!45;UBERON:0002416!5.79e-07!45;UBERON:0002097!6.45e-07!40;UBERON:0000490!7.77e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.63e-09;3!UBERON:0001992;7.63e-09;3!UBERON:0007846;8.46e-09;3!UBERON:0000043;8.46e-09;3!UBERON:0007845;8.46e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,6.46e-09,3;UBERON:0001992,6.46e-09,3;UBERON:0007846,1.06e-08,3;UBERON:0000043,1.06e-08,3;UBERON:0007845,1.06e-08,3 | |||
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| |||
|short_description=p@chr16:69746953..69746965,- | |||
}} |
Revision as of 11:20, 11 September 2013
Short description: | p@chr16:69746953..69746965, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:69746953..69746965, - |
Coexpression cluster: | C3588_Olfactory_normal_large_Fibroblast_Hair_mixed_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 3.92e-10 | 28 |
hair follicle dermal papilla cell | 6.46e-09 | 3 |
stem cell of epidermis | 6.46e-09 | 3 |
fibrocyte | 1.06e-08 | 3 |
tendon cell | 1.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 6.46e-09 | 3 |
papillary layer of dermis | 6.46e-09 | 3 |
dense regular connective tissue | 1.06e-08 | 3 |
tendon | 1.06e-08 | 3 |
regular connective tissue | 1.06e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.