FFCP PHASE1:Hg19::chr16:83371254..83371258,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:83371254..83371258,+|id=chr16:83371254..83371258,+|ontology_enrichment_celltype=CL:0000243!1.39e-07!15;CL:0000125!1.39e-07!15;CL:0000030!1.39e-07!15;CL:0000339!1.39e-07!15;CL:0002573!1.59e-07!2;CL:0002623!3.97e-07!3|ontology_enrichment_celltype_v019=CL:0002573;2.18e-38;2!CL:0002379;2.05e-29;1!CL:0000243;1.25e-07;15!CL:0000125;1.25e-07;15!CL:0000095;6.38e-07;17|ontology_enrichment_celltype_v019_2=CL:0002573,2.64e-38,2;CL:0002379,9.99e-30,1;CL:0000243,1.29e-07,15;CL:0000125,1.29e-07,15;CL:0000030,1.29e-07,15;CL:0000339,1.29e-07,15;CL:0000095,6.57e-07,17;CL:0000123,6.57e-07,17|ontology_enrichment_development_v019=UBERON:0000358;7.47e-30;1!CL:0000339;1.25e-07;15|ontology_enrichment_disease=DOID:3093!5.31e-07!11|ontology_enrichment_disease_v019=DOID:3620;2.05e-29;1!DOID:3565;2.05e-29;1|ontology_enrichment_disease_v019_2=DOID:3620,9.99e-30,1;DOID:3565,9.99e-30,1|ontology_enrichment_uberon=UBERON:0000014!2.50e-08!4;UBERON:0000956!1.63e-07!25;UBERON:0000203!1.63e-07!25;UBERON:0002619!1.91e-07!22;UBERON:0002020!5.27e-07!34;UBERON:0003528!5.27e-07!34|ontology_enrichment_uberon_v019=UBERON:0001954;1.91e-15;2!UBERON:0003022;1.91e-15;2!UBERON:0002421;1.91e-15;2!UBERON:0002600;1.91e-15;2!UBERON:0000010;1.49e-13;8!UBERON:0000349;5.86e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-15,2;UBERON:0003022,1.78e-15,2;UBERON:0002421,1.78e-15,2;UBERON:0002600,1.78e-15,2;UBERON:0000010,1.58e-13,8;UBERON:0000349,5.70e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.893288987462089,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0,0.19924798825107,0,0,0.613612095012929,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.435296032902013,0.17472666824203,0.687944129886466,0,0,0,0.0969890164884194,0,0,1.50746117111426,0.19871461170299,0.316553979779393,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.249960815924213,0,0,1.6468607378872,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.3062454773532,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0.414432328326074,0.85359238546975,0.691259661814092,0,1.06498800657509,1.619054690424,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0.162806537221949,0.533636729388577,0,0,2.34640942403454,0.122241444182866,0,0,0,0|short_description=p@chr16:83371254..83371258,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:83371254..83371258,+ | |||
|id=chr16:83371254..83371258,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.39e-07!15;CL:0000125!1.39e-07!15;CL:0000030!1.39e-07!15;CL:0000339!1.39e-07!15;CL:0002573!1.59e-07!2;CL:0002623!3.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002573;2.18e-38;2!CL:0002379;2.05e-29;1!CL:0000243;1.25e-07;15!CL:0000125;1.25e-07;15!CL:0000095;6.38e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.64e-38,2;CL:0002379,9.99e-30,1;CL:0000243,1.29e-07,15;CL:0000125,1.29e-07,15;CL:0000030,1.29e-07,15;CL:0000339,1.29e-07,15;CL:0000095,6.57e-07,17;CL:0000123,6.57e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.47e-30;1!CL:0000339;1.25e-07;15 | |||
|ontology_enrichment_disease=DOID:3093!5.31e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3620;2.05e-29;1!DOID:3565;2.05e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,9.99e-30,1;DOID:3565,9.99e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0000014!2.50e-08!4;UBERON:0000956!1.63e-07!25;UBERON:0000203!1.63e-07!25;UBERON:0002619!1.91e-07!22;UBERON:0002020!5.27e-07!34;UBERON:0003528!5.27e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.91e-15;2!UBERON:0003022;1.91e-15;2!UBERON:0002421;1.91e-15;2!UBERON:0002600;1.91e-15;2!UBERON:0000010;1.49e-13;8!UBERON:0000349;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-15,2;UBERON:0003022,1.78e-15,2;UBERON:0002421,1.78e-15,2;UBERON:0002600,1.78e-15,2;UBERON:0000010,1.58e-13,8;UBERON:0000349,5.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.893288987462089,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0,0.19924798825107,0,0,0.613612095012929,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.435296032902013,0.17472666824203,0.687944129886466,0,0,0,0.0969890164884194,0,0,1.50746117111426,0.19871461170299,0.316553979779393,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.249960815924213,0,0,1.6468607378872,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.3062454773532,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0.414432328326074,0.85359238546975,0.691259661814092,0,1.06498800657509,1.619054690424,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0.162806537221949,0.533636729388577,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr16:83371254..83371258,+ | |||
}} |
Revision as of 11:46, 11 September 2013
Short description: | p@chr16:83371254..83371258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:83371254..83371258, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.64e-38 | 2 |
meningothelial cell | 9.99e-30 | 1 |
glial cell (sensu Vertebrata) | 1.29e-07 | 15 |
glial cell | 1.29e-07 | 15 |
glioblast | 1.29e-07 | 15 |
glioblast (sensu Vertebrata) | 1.29e-07 | 15 |
neuron associated cell | 6.57e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.57e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.78e-15 | 2 |
lobe parts of cerebral cortex | 1.78e-15 | 2 |
hippocampal formation | 1.78e-15 | 2 |
limbic lobe | 1.78e-15 | 2 |
peripheral nervous system | 1.58e-13 | 8 |
limbic system | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 9.99e-30 | 1 |
meningioma | 9.99e-30 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.