FFCP PHASE1:Hg19::chr18:20419512..20419521,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C231|description=CAGE_peak_at_chr18:20419512..20419521,-|id=chr18:20419512..20419521,-|ontology_enrichment_celltype=CL:0000077!3.38e-13!19;CL:0002166!2.59e-10!3;CL:0002621!2.59e-10!3;CL:0000076!1.04e-09!62;CL:0002251!4.59e-08!21;CL:0002336!5.82e-08!1;CL:0002261!5.82e-08!1;CL:0002170!5.82e-08!1|ontology_enrichment_celltype_v019=CL:0000077;7.35e-34;19!CL:0002097;6.30e-21;2!CL:0000174;1.96e-14;3!CL:0000213;2.16e-09;58!CL:0000215;2.16e-09;58!CL:0000076;1.86e-08;63|ontology_enrichment_celltype_v019_2=CL:0000077,7.67e-34,19;CL:0002097,6.96e-21,2;CL:0000076,2.47e-16,63;CL:0000174,2.09e-14,3;CL:0000213,1.28e-11,58;CL:0000215,1.28e-11,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:170;7.01e-08;6|ontology_enrichment_disease_v019_2=DOID:170,7.25e-08,6|ontology_enrichment_uberon=UBERON:0001949!2.59e-10!3;UBERON:0002171!2.33e-08!1;UBERON:0006518!2.33e-08!1;UBERON:0008949!2.33e-08!1;UBERON:0000101!2.33e-08!1;UBERON:0002167!2.33e-08!1;UBERON:0000997!4.72e-08!1;UBERON:0005056!4.72e-08!1;UBERON:0001708!6.04e-08!4;UBERON:0001704!6.04e-08!4|ontology_enrichment_uberon_v019=UBERON:0002369;1.96e-14;3!UBERON:0001235;1.96e-14;3!UBERON:0006858;1.96e-14;3|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.09e-14,3;UBERON:0001235,2.09e-14,3;UBERON:0006858,2.09e-14,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,0.871533458600294,3.19913571782583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,2.19284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:20419512..20419521,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr18:20419512..20419521,- | |||
|id=chr18:20419512..20419521,- | |||
|ontology_enrichment_celltype=CL:0000077!3.38e-13!19;CL:0002166!2.59e-10!3;CL:0002621!2.59e-10!3;CL:0000076!1.04e-09!62;CL:0002251!4.59e-08!21;CL:0002336!5.82e-08!1;CL:0002261!5.82e-08!1;CL:0002170!5.82e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.35e-34;19!CL:0002097;6.30e-21;2!CL:0000174;1.96e-14;3!CL:0000213;2.16e-09;58!CL:0000215;2.16e-09;58!CL:0000076;1.86e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.67e-34,19;CL:0002097,6.96e-21,2;CL:0000076,2.47e-16,63;CL:0000174,2.09e-14,3;CL:0000213,1.28e-11,58;CL:0000215,1.28e-11,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:170;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.59e-10!3;UBERON:0002171!2.33e-08!1;UBERON:0006518!2.33e-08!1;UBERON:0008949!2.33e-08!1;UBERON:0000101!2.33e-08!1;UBERON:0002167!2.33e-08!1;UBERON:0000997!4.72e-08!1;UBERON:0005056!4.72e-08!1;UBERON:0001708!6.04e-08!4;UBERON:0001704!6.04e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.96e-14;3!UBERON:0001235;1.96e-14;3!UBERON:0006858;1.96e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.09e-14,3;UBERON:0001235,2.09e-14,3;UBERON:0006858,2.09e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,0.871533458600294,3.19913571782583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,2.19284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:20419512..20419521,- | |||
}} |
Revision as of 16:59, 11 September 2013
Short description: | p@chr18:20419512..20419521, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:20419512..20419521, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.67e-34 | 19 |
cortical cell of adrenal gland | 6.96e-21 | 2 |
squamous epithelial cell | 2.47e-16 | 63 |
steroid hormone secreting cell | 2.09e-14 | 3 |
lining cell | 1.28e-11 | 58 |
barrier cell | 1.28e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.09e-14 | 3 |
adrenal cortex | 2.09e-14 | 3 |
adrenal/interrenal gland | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 7.25e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.