FFCP PHASE1:Hg19::chr18:3452133..3452150,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7050|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11776|TSSclassifier=S|UniProt=|association_with_transcript=155bp_to_AB527497,CU689140,DQ891563,DQ894751_5end|description=CAGE_peak_19_at_TGIF1_5end|id=chr18:3452133..3452150,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000860;1.38e-09;33!CL:0002057;1.38e-09;33!CL:0000473;4.72e-07;39!CL:0000234;4.72e-07;39|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-07,42;CL:0002057,2.12e-07,42;CL:0000047,3.05e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.92e-08!659;UBERON:0000926!9.31e-07!448;UBERON:0004120!9.31e-07!448;UBERON:0006603!9.31e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001434,3.73e-07,100|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0.37129905888014,0.331397375727916,2.6893005858071,0.602694528023977,0.730310090387373,0,0.369363174230364,1.02000345622126,1.25381888591235,0.286235987131057,0.410623275218653,1.00434111675842,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0,0.464858073811369,1.23350366406548,0.619412741790207,0.863077176966451,1.2808035326455,0.47296445977717,4.13694816883942,2.5819387343353,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,4.89734227793444,2.88836124368484,5.11469700639233,0.329851300186716,0,0,3.19230162491442,1.70215567407342,2.4912889959823,0.75374599577023,0,0.434377689410233,1.21079900526674,0.736555271975129,1.89877432464531,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,0,1.79616152611729,0.886917589850256,0.614843499851882,0.0654895377488563,0.364295288292542,1.11235332835329,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0.516833518338658,0.35576626268671,0.66944122552934,2.81980521976403,0,2.19655851793353,0.735326160691737,1.62028389576352,0.267899184852239,0,0.225222960966644,0,0,0.549605231791222,0,0,0,0.993943903390637,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,1.06748995729705,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,0.302714855289863,0,0.468642863667593,0.312160076830321,0.570471821544449,0.597794722207204,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.103325781175765,2.37600571456411,1.23633464639278,0,0,0,0.125118519871964,0.277064115484183,0,0,1.95309476578576,0.113432183160021,0,0.640672166455702,0.211931901159562,0,0.412210116953756,0,0,0,0.0974370051611986,0,0.460249493211497,0.323292113637624,0.355009592516614,0,0.169560592310488,0.193260853163297,0.818238361772504,0,0.487894824518382,0.397589304964456,0.232387885739037,0.310983165046111,0.504641701751257,1.45990943630332,0,0,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0.723033089650446,1.10293972732394,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0.370353780634118,0.651616610620649,0,0,0.927443239800615,0.469634776943287,0.433099343283221,1.85194205030644,1.14152491340759,0,0,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0,0,0.985326475791887,0,2.28060927094849,2.59415916150531,1.13618190083742,0.190493682876507,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0.775630294546667,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0,0.197030760201927,0.215627574859517,0,1.01637849688985,1.30139853857622,2.31986643833309,0,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,1.35632511849868,0.415941723061614,0.535286966391485,0.473107245101804,0.468565659970853,0.300946099727719,0,0,0.664225598535437,1.47495334833363,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0.106727557803444,3.94065842880137,0,0,0.744323423456331,0.306923946576125,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,1.9531789784444,0.410635780069046,0.519254429183621,1.04589340613963,0.120859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,1.27463817604702,1.18011973463482,0.451199612907412,0.462092022626489,0,0,0.316654886678627,0,0,0,3.08454505380579,0.270946437543853,1.00337954770971,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0,0,0.6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201273793591026,0|short_description=p19@TGIF1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=155bp_to_AB527497,CU689140,DQ891563,DQ894751_5end | |||
|description=CAGE_peak_19_at_TGIF1_5end | |||
|id=chr18:3452133..3452150,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-09;33!CL:0002057;1.38e-09;33!CL:0000473;4.72e-07;39!CL:0000234;4.72e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-07,42;CL:0002057,2.12e-07,42;CL:0000047,3.05e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.92e-08!659;UBERON:0000926!9.31e-07!448;UBERON:0004120!9.31e-07!448;UBERON:0006603!9.31e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,3.73e-07,100 | |||
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| |||
|short_description=p19@TGIF1 | |||
}} |
Revision as of 17:23, 11 September 2013
Short description: | p19@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_AB527497, CU689140, DQ891563, DQ894751_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.12e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-07 | 42 |
neuronal stem cell | 3.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 3.73e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.