FFCP PHASE1:Hg19::chr19:1038801..1038822,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:1038801..1038822,+|id=chr19:1038801..1038822,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000487;8.41e-18;2!CL:0000540;4.21e-13;6!CL:0000404;4.21e-13;6!CL:0002521;2.69e-12;3!CL:0002615;3.46e-12;3!CL:0000136;1.30e-10;13!CL:0002574;1.48e-09;1!CL:0002537;1.17e-07;5|ontology_enrichment_celltype_v019_2=CL:1000487,7.43e-18,2;CL:0000540,4.13e-13,6;CL:0000031,4.13e-13,6;CL:0000404,4.13e-13,6;CL:0002521,2.69e-12,3;CL:0002615,2.85e-12,3;CL:0000047,5.76e-10,8;CL:0002574,2.46e-09,1;CL:0000136,2.99e-09,15;CL:0002537,1.41e-07,5|ontology_enrichment_development_v019=CL:0000031;4.21e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002367;1.87e-12;11!UBERON:0010147;1.87e-12;11!UBERON:0002190;2.69e-12;3!UBERON:0003937;1.97e-11;12!UBERON:0005399;1.97e-11;12!UBERON:0000029;5.54e-10;1!UBERON:0002072;1.01e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.05e-12,11;UBERON:0010147,2.05e-12,11;UBERON:0009846,2.05e-12,11;UBERON:0003353,2.05e-12,11;UBERON:0004902,2.05e-12,11;UBERON:0003820,2.05e-12,11;UBERON:0009847,2.05e-12,11;UBERON:0002190,2.69e-12,3;UBERON:0003937,2.15e-11,12;UBERON:0005399,2.15e-11,12;UBERON:0000029,5.31e-10,1;UBERON:0000162,8.62e-10,14;UBERON:0001353,8.62e-10,14;UBERON:0000163,8.62e-10,14;UBERON:0006866,8.62e-10,14;UBERON:0000164,8.62e-10,14;UBERON:0000931,8.62e-10,14;UBERON:0004122,3.79e-09,15;UBERON:0002072,1.01e-07,5;UBERON:0001046,3.00e-07,19|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,2.00146596706261,1.78784437770915,0.872338524100369,5.06599756336621,0,1.30592814099919,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0,0,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.520237390239513,0.493313713811028,0.552700035571697,0,0,0,1.04535523804977,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.12786256184353,1.44575660953827,0,0.289693037921647,0.795285947051099,0,0.472674085820339,0,0.175669571386252,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.412210116953756,0.257640540045629,0.558350568994769,0,0.292311015483596,0,0,0.646584227275248,0,0.403008392910561,0.169560592310488,0.193260853163297,0.272746120590835,0,0.487894824518382,0.265059536642971,0.116193942869518,0.621966330092223,0.252320850875628,0,0,2.57296375277154,0,0.928735856063958,0,0.354920400119532,0,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.514703430895577,0.439001141634502,0,0.502644862058154,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,1.06375246633948,2.08014873822732,0,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0.799783929456456,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0,0.613457458595699,0.500170521059677,0.271265023699736,0.831883446123229,1.07057393278297,0.473107245101804,0,0,0,0,0,0.368738337083406,1.04260337361699,0.195801157462741,1.71571711905428,0,0,0.426910231213777,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0,0,0.160853921143607,0,0,0.532685175939381,0,0,0.813472649219715,0.604297247958111,1.00253235151642,0.736647911487171,0.34444334449382,0.182091168006717,2.62248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.1030410116477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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:1038801..1038822,+ | |||
|id=chr19:1038801..1038822,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;8.41e-18;2!CL:0000540;4.21e-13;6!CL:0000404;4.21e-13;6!CL:0002521;2.69e-12;3!CL:0002615;3.46e-12;3!CL:0000136;1.30e-10;13!CL:0002574;1.48e-09;1!CL:0002537;1.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,7.43e-18,2;CL:0000540,4.13e-13,6;CL:0000031,4.13e-13,6;CL:0000404,4.13e-13,6;CL:0002521,2.69e-12,3;CL:0002615,2.85e-12,3;CL:0000047,5.76e-10,8;CL:0002574,2.46e-09,1;CL:0000136,2.99e-09,15;CL:0002537,1.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;4.21e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.87e-12;11!UBERON:0010147;1.87e-12;11!UBERON:0002190;2.69e-12;3!UBERON:0003937;1.97e-11;12!UBERON:0005399;1.97e-11;12!UBERON:0000029;5.54e-10;1!UBERON:0002072;1.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.05e-12,11;UBERON:0010147,2.05e-12,11;UBERON:0009846,2.05e-12,11;UBERON:0003353,2.05e-12,11;UBERON:0004902,2.05e-12,11;UBERON:0003820,2.05e-12,11;UBERON:0009847,2.05e-12,11;UBERON:0002190,2.69e-12,3;UBERON:0003937,2.15e-11,12;UBERON:0005399,2.15e-11,12;UBERON:0000029,5.31e-10,1;UBERON:0000162,8.62e-10,14;UBERON:0001353,8.62e-10,14;UBERON:0000163,8.62e-10,14;UBERON:0006866,8.62e-10,14;UBERON:0000164,8.62e-10,14;UBERON:0000931,8.62e-10,14;UBERON:0004122,3.79e-09,15;UBERON:0002072,1.01e-07,5;UBERON:0001046,3.00e-07,19 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,2.00146596706261,1.78784437770915,0.872338524100369,5.06599756336621,0,1.30592814099919,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0,0,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.520237390239513,0.493313713811028,0.552700035571697,0,0,0,1.04535523804977,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.12786256184353,1.44575660953827,0,0.289693037921647,0.795285947051099,0,0.472674085820339,0,0.175669571386252,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.412210116953756,0.257640540045629,0.558350568994769,0,0.292311015483596,0,0,0.646584227275248,0,0.403008392910561,0.169560592310488,0.193260853163297,0.272746120590835,0,0.487894824518382,0.265059536642971,0.116193942869518,0.621966330092223,0.252320850875628,0,0,2.57296375277154,0,0.928735856063958,0,0.354920400119532,0,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.514703430895577,0.439001141634502,0,0.502644862058154,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,1.06375246633948,2.08014873822732,0,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0.799783929456456,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0,0.613457458595699,0.500170521059677,0.271265023699736,0.831883446123229,1.07057393278297,0.473107245101804,0,0,0,0,0,0.368738337083406,1.04260337361699,0.195801157462741,1.71571711905428,0,0,0.426910231213777,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0,0,0.160853921143607,0,0,0.532685175939381,0,0,0.813472649219715,0.604297247958111,1.00253235151642,0.736647911487171,0.34444334449382,0.182091168006717,2.62248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.386682873168488,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.340906509664404,0.445160178233687,0.330569830721956,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.54907405947211,0,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,1.36499911407986,2.12108147930569,0,0,0,0.876901770507525,0,0,0,0,0.563391205064483,0.143411352204052,0.0982490410131212,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,0.188287601553558,0.86101074534246,0,0.443430153536676,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0.732780747214898,0,0,0,0,0,0,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,1.12527203925513,1.65047323916681,2.07720169014593,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0.864221491201268,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0.21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| |||
|short_description=p@chr19:1038801..1038822,+ | |||
}} |
Revision as of 18:31, 11 September 2013
Short description: | p@chr19:1038801..1038822, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:1038801..1038822, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 7.43e-18 | 2 |
neuron | 4.13e-13 | 6 |
neuroblast | 4.13e-13 | 6 |
electrically signaling cell | 4.13e-13 | 6 |
subcutaneous fat cell | 2.69e-12 | 3 |
adipocyte of omentum tissue | 2.85e-12 | 3 |
neuronal stem cell | 5.76e-10 | 8 |
stromal cell of pancreas | 2.46e-09 | 1 |
fat cell | 2.99e-09 | 15 |
amnion mesenchymal stem cell | 1.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.05e-12 | 11 |
male accessory sex gland | 2.05e-12 | 11 |
embryonic cloacal epithelium | 2.05e-12 | 11 |
epithelium of hindgut | 2.05e-12 | 11 |
urogenital sinus epithelium | 2.05e-12 | 11 |
prostate bud | 2.05e-12 | 11 |
prostate field | 2.05e-12 | 11 |
subcutaneous adipose tissue | 2.69e-12 | 3 |
sex gland | 2.15e-11 | 12 |
male reproductive gland | 2.15e-11 | 12 |
lymph node | 5.31e-10 | 1 |
cloaca | 8.62e-10 | 14 |
anal region | 8.62e-10 | 14 |
embryonic cloaca | 8.62e-10 | 14 |
terminal part of digestive tract | 8.62e-10 | 14 |
primitive urogenital sinus | 8.62e-10 | 14 |
proctodeum | 8.62e-10 | 14 |
genitourinary system | 3.79e-09 | 15 |
hypodermis | 1.01e-07 | 5 |
hindgut | 3.00e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.