FFCP PHASE1:Hg19::chr19:1753498..1753519,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=390874|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=13399|TSSclassifier=W|UniProt=O60422|association_with_transcript=-142bp_to_NM_001080488,uc010xgr.1_5end|coexpression_cluster_id=C3764|description=CAGE_peak_1_at_ONECUT3_5end|id=chr19:1753498..1753519,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002178;1.46e-13;3|ontology_enrichment_celltype_v019_2=CL:0002178,1.51e-13,3|ontology_enrichment_development_v019=UBERON:0006242;9.83e-11;1|ontology_enrichment_disease=DOID:305!4.76e-12!106;DOID:0050687!1.26e-10!143;DOID:3493!1.93e-09!2;DOID:299!4.58e-09!25;DOID:4929!1.37e-08!2;DOID:162!1.91e-07!235;DOID:14566!3.75e-07!239|ontology_enrichment_disease_v019=DOID:3493;6.44e-20;2!DOID:299;1.88e-17;25!DOID:3111;1.65e-10;1!DOID:3603;1.65e-10;1|ontology_enrichment_disease_v019_2=DOID:3493,6.44e-20,2;DOID:299,1.86e-17,25;DOID:3111,1.73e-10,1;DOID:3603,1.73e-10,1;DOID:305,1.73e-10,106;DOID:0050687,3.01e-10,143;DOID:162,2.18e-08,235;DOID:14566,3.74e-08,239|ontology_enrichment_uberon=UBERON:0002294!1.46e-13!7;UBERON:0001173!1.46e-13!7;UBERON:0004912!1.46e-13!7;UBERON:0002394!3.90e-09!4;UBERON:0003928!3.90e-09!4|ontology_enrichment_uberon_v019=UBERON:0000945;2.26e-17;5!UBERON:0010039;2.26e-17;5|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.63e-11,8;UBERON:0010039,4.63e-11,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0.33307196799782,0,9.73130810122743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3365771298305,0.716084698702437,0,0,0,0,0,0,0,0,0,0,2.16207551742449,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,11.4549427301186,0,0,0,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0,0.195551382734803,0,16.0089746054514,0,23.1985571618111,0,0,15.5579181827202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,2.87454938312845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,7.18461219419332,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.3141228475599,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,2.33585943973345,0,0,0,0,0,0,1.00067161847319,0.632054446930906,44.7529487667282,0,0,0,0,0,0,0,0,0,0,0,0,0,31.3099245232625,31.6986604953901,0,0,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,5.11235471772562,0,0,9.15075060720471,0,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,3.23370727583713,0,0,0,0,0,0|short_description=p1@ONECUT3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=390874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13399 | |||
|TSSclassifier=W | |||
|UniProt=O60422 | |||
|association_with_transcript=-142bp_to_NM_001080488,uc010xgr.1_5end | |||
|coexpression_cluster_id=C3764 | |||
|description=CAGE_peak_1_at_ONECUT3_5end | |||
|id=chr19:1753498..1753519,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.46e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.51e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.83e-11;1 | |||
|ontology_enrichment_disease=DOID:305!4.76e-12!106;DOID:0050687!1.26e-10!143;DOID:3493!1.93e-09!2;DOID:299!4.58e-09!25;DOID:4929!1.37e-08!2;DOID:162!1.91e-07!235;DOID:14566!3.75e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.44e-20;2!DOID:299;1.88e-17;25!DOID:3111;1.65e-10;1!DOID:3603;1.65e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.44e-20,2;DOID:299,1.86e-17,25;DOID:3111,1.73e-10,1;DOID:3603,1.73e-10,1;DOID:305,1.73e-10,106;DOID:0050687,3.01e-10,143;DOID:162,2.18e-08,235;DOID:14566,3.74e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.46e-13!7;UBERON:0001173!1.46e-13!7;UBERON:0004912!1.46e-13!7;UBERON:0002394!3.90e-09!4;UBERON:0003928!3.90e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.26e-17;5!UBERON:0010039;2.26e-17;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.63e-11,8;UBERON:0010039,4.63e-11,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0.33307196799782,0,9.73130810122743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3365771298305,0.716084698702437,0,0,0,0,0,0,0,0,0,0,2.16207551742449,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,11.4549427301186,0,0,0,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0,0.195551382734803,0,16.0089746054514,0,23.1985571618111,0,0,15.5579181827202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,2.87454938312845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,7.18461219419332,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.3141228475599,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,2.33585943973345,0,0,0,0,0,0,1.00067161847319,0.632054446930906,44.7529487667282,0,0,0,0,0,0,0,0,0,0,0,0,0,31.3099245232625,31.6986604953901,0,0,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,5.11235471772562,0,0,9.15075060720471,0,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,3.23370727583713,0,0,0,0,0,0 | |||
|short_description=p1@ONECUT3 | |||
}} |
Revision as of 19:19, 11 September 2013
Short description: | p1@ONECUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ONECUT3_5end |
Coexpression cluster: | C3764_rhabdomyosarcoma_signet_gastric_gall_giant_endometrioid_adenocarcinoma |
Association with transcript: | -142bp_to_NM_001080488, uc010xgr.1_5end |
EntrezGene: | ONECUT3 |
HGNC: | 13399 |
UniProt: | O60422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.51e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 4.63e-11 | 8 |
food storage organ | 4.63e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.44e-20 | 2 |
adenocarcinoma | 1.86e-17 | 25 |
cystadenocarcinoma | 1.73e-10 | 1 |
mucinous cystadenocarcinoma | 1.73e-10 | 1 |
carcinoma | 1.73e-10 | 106 |
cell type cancer | 3.01e-10 | 143 |
cancer | 2.18e-08 | 235 |
disease of cellular proliferation | 3.74e-08 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.