FFCP PHASE1:Hg19::chr1:155214371..155214389,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2629|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4177|TSSclassifier=S|UniProt=|association_with_transcript=7bp_to_ENST00000467918_5end|description=CAGE_peak_4_at_GBA_5end|id=chr1:155214371..155214389,-|ontology_enrichment_celltype=CL:0000055!6.11e-22!180;CL:0000333!2.15e-12!41;CL:0000548!1.63e-10!679;CL:0000004!1.63e-10!679;CL:0000255!1.63e-10!679;CL:0000012!1.86e-10!682;CL:0000133!3.36e-10!59;CL:0000144!5.23e-10!625;CL:0002371!2.13e-09!591;CL:0000221!2.90e-09!71;CL:0000220!1.32e-08!246;CL:0000057!1.41e-08!75;CL:0000095!1.66e-08!17;CL:0000123!1.66e-08!17;CL:0002321!2.29e-08!248;CL:0000243!8.61e-08!15;CL:0000125!8.61e-08!15;CL:0000030!8.61e-08!15;CL:0000339!8.61e-08!15;CL:0002319!9.58e-08!25|ontology_enrichment_celltype_v019=CL:0000095;1.58e-09;17!CL:0000243;1.34e-08;15!CL:0000125;1.34e-08;15!CL:0002319;6.15e-08;25|ontology_enrichment_celltype_v019_2=CL:0000333,1.07e-13,41;CL:0000133,1.38e-10,59;CL:0000095,2.92e-09,17;CL:0000123,2.92e-09,17;CL:0000057,8.20e-09,76;CL:0000221,8.60e-09,72;CL:0000243,1.94e-08,15;CL:0000125,1.94e-08,15;CL:0000030,1.94e-08,15;CL:0000339,1.94e-08,15;CL:0002319,3.98e-08,25;CL:0002321,6.81e-08,250|ontology_enrichment_development_v019=CL:0000339;1.34e-08;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002199!9.76e-07!45;UBERON:0002416!9.76e-07!45|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.09007027562334,1.2846031433459,2.53717927372748,1.0007329835313,3.12872766099101,0.872338524100369,2.53299878168311,1.89515962028049,2.35067065379855,2.45733936501509,4.18680700783456,5.67947567538448,2.37390280405608,3.21792517696121,2.98257638155124,0,1.80808358407193,0.730310090387373,2.43966399395253,11.8196215753716,5.10001728110633,4.38836610069323,6.29719171688325,2.32686522623903,2.63639543149086,0.916960868975415,0.821005894499457,1.10195093839151,0.393364276848904,0.383829398097213,0,4.59710612239464,1.50602959389125,1.47901604066715,3.71842562785448,1.9903692548239,2.05520307534393,0,0,0.217010870715852,1.56740831967947,0.971680998056939,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628975936525128,0,0,0.16072558669708,0,0,0,0,1.09227722252426,0.889509253863555,1.28019066769952,0,1.72425731986345,0.661044872784862,0.954053754535364,0,0,0,1.32171328579026,0,1.31692042387539,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0,0.473447805734733,0,0.668462741311041,0.883817722424512,0,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,1.10540007114339,0.579606171470105,0.444859689486181,0,0,0.679856056185397,0.383220493601921,0,0,0,0.651083453856419,0.950452044448374,0.752875595388864,0.76791966692651,6.24653632761729,0.236777252044017,0.821127996921047,0.604820229674197,0.534880391567015,0.289648807765598,0,2.68280343881454,1.15076305659177,7.22878304769133,2.00535164254356,2.31754430337318,0.795285947051099,3.40644409211845,2.26883561193763,1.33037638477538,1.40535657109002,1.63723844372141,1.09288586487763,1.11235332835329,0.324547393654683,0,0.398873881556595,0.238490624305342,0.571994910780128,0,0.79504962946682,0,1.38856200643038,2.26123176769604,3.35599548967925,0.825354125820202,2.29894463190492,0.775250277507987,2.84613010149368,2.67776490211736,5.63961043952806,0.760272105718513,1.95249646038536,1.83831540172934,1.62028389576352,1.60739510911344,1.12264686313085,1.12611480483322,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,1.49091585508596,1.51956613997496,1.58891016975863,6.59724227722272,3.54668382198357,1.12135520028461,0,2.4666754841716,3.7345324247972,2.2900814251847,1.14423332179421,6.81108424402191,1.72852777344,2.57753575017176,0.624320153660641,1.1409436430889,0.149448680551801,0.469737994575059,1.13311061057692,1.68540968042698,1.42907919878425,0.368502951935304,0.619954687054593,0,2.47266929278557,5.46096817162816,2.15585442544872,0.673344455816265,1.37630371859161,3.04770527032601,1.31693286264251,1.83892677479412,1.05166641234618,3.17610112848059,3.94657198515496,1.06778694409284,0.635795703478686,5.70173082560364,1.95799805553034,3.60696756063881,3.35010341396862,5.06328996723799,1.75386609290158,1.7670364197088,0.828449087780694,1.77810662500693,4.61512470271599,2.82105875037393,3.56077243852024,1.35282597214308,0.272746120590835,0.286804595389004,0.365921118388786,0.662648841607426,0.69716365721711,0.829288440122964,0,1.45990943630332,4.69348596989448,6.43240938192885,8.28809528114883,1.39310378409594,0.721879481669586,0.354920400119532,1.51726221070292,0.241011029883482,0.882351781859152,0.871517776369625,0.237270619111097,1.07865046528132,1.76599318612811,0,2.95262181849859,0,2.8810180793198,0,0,0,0,6.18048339180511,0.983907508344908,3.77449182656756,0.768251997860379,2.24803506515239,0.100528972411631,0.370353780634118,1.62904152655162,1.03993478527958,1.44331342025273,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4177 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000467918_5end | |||
|description=CAGE_peak_4_at_GBA_5end | |||
|id=chr1:155214371..155214389,- | |||
|ontology_enrichment_celltype=CL:0000055!6.11e-22!180;CL:0000333!2.15e-12!41;CL:0000548!1.63e-10!679;CL:0000004!1.63e-10!679;CL:0000255!1.63e-10!679;CL:0000012!1.86e-10!682;CL:0000133!3.36e-10!59;CL:0000144!5.23e-10!625;CL:0002371!2.13e-09!591;CL:0000221!2.90e-09!71;CL:0000220!1.32e-08!246;CL:0000057!1.41e-08!75;CL:0000095!1.66e-08!17;CL:0000123!1.66e-08!17;CL:0002321!2.29e-08!248;CL:0000243!8.61e-08!15;CL:0000125!8.61e-08!15;CL:0000030!8.61e-08!15;CL:0000339!8.61e-08!15;CL:0002319!9.58e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000095;1.58e-09;17!CL:0000243;1.34e-08;15!CL:0000125;1.34e-08;15!CL:0002319;6.15e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.07e-13,41;CL:0000133,1.38e-10,59;CL:0000095,2.92e-09,17;CL:0000123,2.92e-09,17;CL:0000057,8.20e-09,76;CL:0000221,8.60e-09,72;CL:0000243,1.94e-08,15;CL:0000125,1.94e-08,15;CL:0000030,1.94e-08,15;CL:0000339,1.94e-08,15;CL:0002319,3.98e-08,25;CL:0002321,6.81e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000339;1.34e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!9.76e-07!45;UBERON:0002416!9.76e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@GBA | |||
}} |
Revision as of 00:44, 12 September 2013
Short description: | p4@GBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000467918_5end |
EntrezGene: | GBA |
HGNC: | 4177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.07e-13 | 41 |
neurectodermal cell | 1.38e-10 | 59 |
neuron associated cell | 2.92e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.92e-09 | 17 |
fibroblast | 8.20e-09 | 76 |
ectodermal cell | 8.60e-09 | 72 |
glial cell (sensu Vertebrata) | 1.94e-08 | 15 |
glial cell | 1.94e-08 | 15 |
glioblast | 1.94e-08 | 15 |
glioblast (sensu Vertebrata) | 1.94e-08 | 15 |
neural cell | 3.98e-08 | 25 |
embryonic cell | 6.81e-08 | 250 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.