FFCP PHASE1:Hg19::chr1:156736970..156737006,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5546|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9343|TSSclassifier=W|UniProt=Q92733,Q96FT4|association_with_transcript=-267bp_to_NM_005973,uc001fqa.2,uc001fqb.2_5end|coexpression_cluster_id=C1|description=CAGE_peak_5_at_PRCC_5end|id=chr1:156736970..156737006,+|ontology_enrichment_celltype=CL:0000055!2.81e-07!180|ontology_enrichment_celltype_v019=CL:0002159;4.94e-08;14!CL:0000317;4.17e-07;2!CL:1000448;4.17e-07;2!CL:0002308;4.17e-07;2!CL:0000771;4.17e-07;2!CL:0002363;4.17e-07;2!CL:0002140;4.17e-07;2!CL:0002598;4.17e-07;2|ontology_enrichment_celltype_v019_2=CL:0002159,4.70e-08,14;CL:0000771,3.70e-07,2;CL:0002598,3.93e-07,2;CL:0000317,4.69e-07,2;CL:1000448,4.69e-07,2;CL:0002308,4.69e-07,2;CL:0002140,4.69e-07,2;CL:0002363,5.60e-07,2;CL:0000008,5.60e-07,2|ontology_enrichment_development_v019=UBERON:0000358;2.62e-13;1!CL:0000008;4.17e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002419;4.17e-07;2!UBERON:0003566;4.17e-07;2!UBERON:0007771;4.17e-07;2!UBERON:0003297;4.17e-07;2!UBERON:0001821;4.17e-07;2!UBERON:0003487;4.17e-07;2!UBERON:0001777;4.17e-07;2!UBERON:0001820;4.17e-07;2!UBERON:0000473;5.54e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.69e-07,2;UBERON:0007771,4.69e-07,2;UBERON:0003297,4.69e-07,2;UBERON:0001821,4.69e-07,2;UBERON:0003487,4.69e-07,2;UBERON:0001820,4.69e-07,2;UBERON:0005089,4.69e-07,2;UBERON:0005088,4.69e-07,2;UBERON:0000473,5.54e-07,8;UBERON:0003566,5.60e-07,2;UBERON:0001777,5.60e-07,2|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0.410623275218653,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0,0,0.087834785693126,2.61958150995425,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,1.31780417436063,0,0.436094052142534,0.496971951695318,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0.49333509683432,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.448346041655403,0.23486899728753,0,0.702254033511242,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0.389748020644795,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.100528972411631,0,0.651616610620649,1.03993478527958,0,0,0,0.433099343283221,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0,1.87467667973554,0.16798212819886,0.850650583454319,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.99972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.828831026872071,0,0,0,0,0.178428988797162,0.157702415033935,0,0,2.27407504055985,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0.821271560138091,0,0.348631135379878,0.120859449591622,0.601519410909855,0,0.114814448164607,0,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0.522870902049801,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,1.14853107599234,0,0,0.193341436584244,0.462145851343933,0.460511024178389,0.551346289938122,0.214840489736547,0.290033387828457,0.426133137080504,0.356128142586949,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0,1.27948895655667,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.811641507850816,0.30982349809975,0,0.573645408816206,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0.637705090915289,0,0,0,0,0.28079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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9343 | |||
|TSSclassifier=W | |||
|UniProt=Q92733,Q96FT4 | |||
|association_with_transcript=-267bp_to_NM_005973,uc001fqa.2,uc001fqb.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_PRCC_5end | |||
|id=chr1:156736970..156737006,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.81e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.94e-08;14!CL:0000317;4.17e-07;2!CL:1000448;4.17e-07;2!CL:0002308;4.17e-07;2!CL:0000771;4.17e-07;2!CL:0002363;4.17e-07;2!CL:0002140;4.17e-07;2!CL:0002598;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.70e-08,14;CL:0000771,3.70e-07,2;CL:0002598,3.93e-07,2;CL:0000317,4.69e-07,2;CL:1000448,4.69e-07,2;CL:0002308,4.69e-07,2;CL:0002140,4.69e-07,2;CL:0002363,5.60e-07,2;CL:0000008,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.62e-13;1!CL:0000008;4.17e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.17e-07;2!UBERON:0003566;4.17e-07;2!UBERON:0007771;4.17e-07;2!UBERON:0003297;4.17e-07;2!UBERON:0001821;4.17e-07;2!UBERON:0003487;4.17e-07;2!UBERON:0001777;4.17e-07;2!UBERON:0001820;4.17e-07;2!UBERON:0000473;5.54e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.69e-07,2;UBERON:0007771,4.69e-07,2;UBERON:0003297,4.69e-07,2;UBERON:0001821,4.69e-07,2;UBERON:0003487,4.69e-07,2;UBERON:0001820,4.69e-07,2;UBERON:0005089,4.69e-07,2;UBERON:0005088,4.69e-07,2;UBERON:0000473,5.54e-07,8;UBERON:0003566,5.60e-07,2;UBERON:0001777,5.60e-07,2 | |||
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| |||
|short_description=p5@PRCC | |||
}} | |||
Revision as of 00:57, 12 September 2013
| Short description: | p5@PRCC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_PRCC_5end |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | -267bp_to_NM_005973, uc001fqa.2, uc001fqb.2_5end |
| EntrezGene: | PRCC |
| HGNC: | 9343 |
| UniProt: | Q92733Q96FT4 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| general ecto-epithelial cell | 4.70e-08 | 14 |
| eosinophil | 3.70e-07 | 2 |
| bronchial smooth muscle cell | 3.93e-07 | 2 |
| sebum secreting cell | 4.69e-07 | 2 |
| epithelial cell of sweat gland | 4.69e-07 | 2 |
| epithelial cell of skin gland | 4.69e-07 | 2 |
| acinar cell of sebaceous gland | 4.69e-07 | 2 |
| keratocyte | 5.60e-07 | 2 |
| migratory cranial neural crest cell | 5.60e-07 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| skin gland | 4.69e-07 | 2 |
| epidermis gland | 4.69e-07 | 2 |
| gland of integumental system | 4.69e-07 | 2 |
| sebaceous gland | 4.69e-07 | 2 |
| skin sebaceous gland | 4.69e-07 | 2 |
| sweat gland | 4.69e-07 | 2 |
| sweat gland placode | 4.69e-07 | 2 |
| sebaceous gland placode | 4.69e-07 | 2 |
| testis | 5.54e-07 | 8 |
| head connective tissue | 5.60e-07 | 2 |
| substantia propria of cornea | 5.60e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
