FFCP PHASE1:Hg19::chr20:34301582..34301589,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9584|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15923|TSSclassifier=N|UniProt=|association_with_transcript=-245bp_to_ENST00000470563_5end|description=CAGE_peak_2_at_RBM39_5end|id=chr20:34301582..34301589,-|ontology_enrichment_celltype=CL:0000738!1.37e-11!140;CL:0002087!4.62e-11!119;CL:0000037!8.12e-11!172;CL:0000566!8.12e-11!172;CL:0002031!2.50e-10!124;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000988!4.68e-09!182;CL:0000542!2.18e-07!53;CL:0000051!2.18e-07!53;CL:0000838!2.30e-07!52|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000738,1.20e-09,136;CL:0002087,7.48e-09,115;CL:0000037,7.83e-09,168;CL:0002031,3.54e-08,120;CL:0000988,4.09e-08,177;CL:0002032,2.37e-07,161;CL:0000837,2.37e-07,161|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!3.39e-09!235;DOID:0050687!5.74e-09!143;DOID:14566!1.20e-08!239;DOID:305!1.55e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,8.96e-08,143;DOID:162,4.42e-07,235|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.81678379270557,1.71280419112787,2.11431606143957,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0,0,0,1.71741592278634,0.958120975510189,0.627713197974014,2.36881557818649,1.9704141467987,2.67616656466509,1.57345710739562,3.83829398097213,2.32224184974114,0,0.30120591877825,0.369754010166788,1.16200800870452,2.55904618477359,3.22960483268332,9.41792194504192,4.8130667392834,11.2845652772243,2.01523926815932,0.32389366601898,1.28787783817093,2.18097358169347,1.51150377475524,0.727752183563449,1.62700325833979,1.23350366406548,1.85823822537062,4.02769349251011,3.07392847834921,0.709446689665756,2.75796544589295,1.29096936716765,1.35426486594342,3.20011977222428,1.36453075028923,1.57306439111559,2.14258724659632,0,3.19668562899521,0.989553900560148,2.19410023383795,0.852449501065388,2.90209238628584,0,1.86846674698672,3.76872997885115,4.17186334736161,0.868755378820466,3.02699751316684,0.736555271975129,1.58231193720442,0.422510572623884,1.4882300997553,1.25795187305026,2.13424399178341,1.95229960693958,0.803627933485401,2.28010194992999,1.19350006319454,0.730656615058536,1.75996244461323,2.18455444504853,4.44754626931777,2.13365111283254,2.40237592221607,2.29900975981793,1.98313461835459,0.954053754535364,5.12291672198504,4.11066032559657,4.58727873750275,1.32171328579026,3.92355994087075,3.423993102076,10.2289080459193,7.8602152549833,6.37364646898479,0.167186495390678,1.62961133316795,2.8406868344084,0,0.445641827540694,2.06224135232386,2.43687284041983,1.35401931882508,1.28091319725675,1.43065282315866,3.12432018746985,2.21080014228679,1.44901542867526,0.444859689486181,2.40786745280742,2.09071047609954,0.793165398882963,1.53288197440768,4.46715679127419,2.78321661221453,2.54852331459277,1.30216690771284,1.90090408889675,0.752875595388864,0.895906278080929,0,1.89421801635213,0,10.4835506476861,10.1627274397733,15.2065624076939,4.87613732627923,0.670700859703636,0.12786256184353,1.80719576192283,1.50401373190767,2.60723734129483,0,2.43317435151318,1.98523116044542,0.221729397462564,0.966182642624386,0.851363990735132,0,0,2.27183175558278,1.39303789839414,2.26028532882071,3.10037811596945,2.85997455390064,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0.838998872419812,1.92582629358047,0.626984899610432,2.06733407335463,1.77883131343355,1.00416183829401,0.402829317109147,0.760272105718513,1.22031028774085,0,0.81014194788176,1.69669483739752,1.12264686313085,0.225222960966644,1.53316637465883,0,0,1.31780417436063,3.87780264148325,0,1.98788780678127,0.759783069987479,4.63432132846266,1.72101972449288,1.06400514659507,0,0,1.2333377420858,1.24484414159907,1.48181739276657,1.14423332179421,0.302714855289863,0,0.468642863667593,0.936480230490962,1.1409436430889,0.747243402759005,0.352303495931295,0.971237666208789,0.280901613404497,2.24569588380383,1.84251475967652,0.826606249406124,0,0.741800787835671,0,0,0.336672227908132,0.750711119231785,0,1.31693286264251,1.5324389789951,0.751190294532984,0.567160915800105,2.33206526395521,1.2813443329114,1.27159140695737,1.80054657650641,0.824420233907511,2.06112432036503,0.37223371266318,5.90717162844432,0.584622030967192,1.26216887122057,1.19664868234989,0.323292113637624,1.77504796258307,0.604512589365842,0.508681776931463,0.386521706326594,0.818238361772504,1.43402297694502,0.243947412259191,0.662648841607426,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,0,1.92972281457866,0,2.3218396401599,0,1.18306800039844,0.337169380156203,0.482022059766964,1.10293972732394,0.435758888184812,0.71181185733329,0.808987848960987,0.784885860501384,0.769494313892781,0,0,0,0,2.53510069643662,1.96565443335525,4.13552934676983,3.97316789473185,3.19769940212095,0.171567810298526,0.21950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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15923 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-245bp_to_ENST00000470563_5end | |||
|description=CAGE_peak_2_at_RBM39_5end | |||
|id=chr20:34301582..34301589,- | |||
|ontology_enrichment_celltype=CL:0000738!1.37e-11!140;CL:0002087!4.62e-11!119;CL:0000037!8.12e-11!172;CL:0000566!8.12e-11!172;CL:0002031!2.50e-10!124;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000988!4.68e-09!182;CL:0000542!2.18e-07!53;CL:0000051!2.18e-07!53;CL:0000838!2.30e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
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|ontology_enrichment_development_v019= | |||
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|ontology_enrichment_disease_v019= | |||
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|ontology_enrichment_uberon= | |||
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| |||
|short_description=p2@RBM39 | |||
}} |
Revision as of 08:14, 12 September 2013
Short description: | p2@RBM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RBM39_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENST00000470563_5end |
EntrezGene: | RBM39 |
HGNC: | 15923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.20e-09 | 136 |
nongranular leukocyte | 7.48e-09 | 115 |
hematopoietic stem cell | 7.83e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 3.54e-08 | 120 |
hematopoietic cell | 4.09e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.96e-08 | 143 |
cancer | 4.42e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.