FFCP PHASE1:Hg19::chr22:23055632..23055638,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=175bp_to_DQ234400_5end|coexpression_cluster_id=C359|description=CAGE_peak_3_at_DQ234400_5end|id=chr22:23055632..23055638,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24!CL:0002092;3.02e-11;10|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0002092,3.02e-11,10;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:630!3.08e-14!1;DOID:0050177!3.08e-14!1;DOID:0050427!3.08e-14!1;DOID:4960!3.50e-14!1;DOID:0070004!3.50e-14!1|ontology_enrichment_disease_v019=DOID:630;9.37e-99;1!DOID:0050177;9.37e-99;1!DOID:0050427;9.37e-99;1!DOID:4960;2.55e-98;1!DOID:0070004;2.55e-98;1|ontology_enrichment_disease_v019_2=DOID:630,9.37e-99,1;DOID:0050177,9.37e-99,1;DOID:0050427,9.37e-99,1;DOID:4960,2.55e-98,1;DOID:0070004,2.55e-98,1|ontology_enrichment_uberon=UBERON:0007023!1.22e-16!115;UBERON:0001154!3.98e-14!1;UBERON:0001153!3.98e-14!1;UBERON:0001831!4.53e-14!1;UBERON:0001567!4.53e-14!1;UBERON:0008801!4.53e-14!1;UBERON:0002372!5.15e-14!1;UBERON:0001961!5.15e-14!1;UBERON:0001744!5.15e-14!1;UBERON:0001735!5.15e-14!1;UBERON:0000029!5.85e-14!1;UBERON:0002363!2.07e-13!1;UBERON:0007647!2.07e-13!1;UBERON:0010115!2.07e-13!1;UBERON:0004921!2.40e-08!129;UBERON:0004185!2.40e-08!129;UBERON:0001829!1.12e-07!2;UBERON:0004089!1.12e-07!2;UBERON:0003127!1.64e-07!2;UBERON:0002360!2.40e-07!2;UBERON:0000094!2.40e-07!2;UBERON:0007645!2.40e-07!2;UBERON:0000078!7.23e-07!18;UBERON:0001007!9.65e-07!155;UBERON:0001555!9.65e-07!155;UBERON:0007026!9.65e-07!155|ontology_enrichment_uberon_v019=UBERON:0002371;1.33e-09;12!UBERON:0001474;7.60e-07;18|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78872955253794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,8.01421230758082|short_description=p3@DQ234400}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=175bp_to_DQ234400_5end | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_3_at_DQ234400_5end | |||
|id=chr22:23055632..23055638,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24!CL:0002092;3.02e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0002092,3.02e-11,10;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!3.08e-14!1;DOID:0050177!3.08e-14!1;DOID:0050427!3.08e-14!1;DOID:4960!3.50e-14!1;DOID:0070004!3.50e-14!1 | |||
|ontology_enrichment_disease_v019=DOID:630;9.37e-99;1!DOID:0050177;9.37e-99;1!DOID:0050427;9.37e-99;1!DOID:4960;2.55e-98;1!DOID:0070004;2.55e-98;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.37e-99,1;DOID:0050177,9.37e-99,1;DOID:0050427,9.37e-99,1;DOID:4960,2.55e-98,1;DOID:0070004,2.55e-98,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-16!115;UBERON:0001154!3.98e-14!1;UBERON:0001153!3.98e-14!1;UBERON:0001831!4.53e-14!1;UBERON:0001567!4.53e-14!1;UBERON:0008801!4.53e-14!1;UBERON:0002372!5.15e-14!1;UBERON:0001961!5.15e-14!1;UBERON:0001744!5.15e-14!1;UBERON:0001735!5.15e-14!1;UBERON:0000029!5.85e-14!1;UBERON:0002363!2.07e-13!1;UBERON:0007647!2.07e-13!1;UBERON:0010115!2.07e-13!1;UBERON:0004921!2.40e-08!129;UBERON:0004185!2.40e-08!129;UBERON:0001829!1.12e-07!2;UBERON:0004089!1.12e-07!2;UBERON:0003127!1.64e-07!2;UBERON:0002360!2.40e-07!2;UBERON:0000094!2.40e-07!2;UBERON:0007645!2.40e-07!2;UBERON:0000078!7.23e-07!18;UBERON:0001007!9.65e-07!155;UBERON:0001555!9.65e-07!155;UBERON:0007026!9.65e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;1.33e-09;12!UBERON:0001474;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78872955253794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,8.01421230758082 | |||
|short_description=p3@DQ234400 | |||
}} |
Revision as of 11:07, 12 September 2013
Short description: | p3@DQ234400 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DQ234400_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 175bp_to_DQ234400_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
bone marrow cell | 3.02e-11 | 10 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.37e-99 | 1 |
monogenic disease | 9.37e-99 | 1 |
xeroderma pigmentosum | 9.37e-99 | 1 |
bone marrow cancer | 2.55e-98 | 1 |
myeloma | 2.55e-98 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.