Personal tools

FFCP PHASE1:Mm9::chr10:66559204..66559282,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=108829|HGNC=|MCL_coexpression_id=1523|UniProt=G3UYW3|association_with_transcript=0bp_to_ENSMUST00000174317_5end|description=CAGE_peak_1_at_Jmjd1c_5end|id=chr10:66559204..66559282,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.73e-07!10;UBERON:0000411!1.73e-07!10;UBERON:0001950!1.73e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.73e-07,10;UBERON:0000411,1.73e-07,10;UBERON:0001950,1.73e-07,10|phase1_expression=25.9441132309766,25.8241801653127,29.1199513209303,65.6347338535821,64.1146534331324,21.1527882608981,16.1192722010913,25.6955413648737,20.4143647119917,23.1723881058774,8.73211637950075,11.3276465773378,22.9408978107816,19.3199089345984,10.9926221399169,10.7311891716608,4.89693314689703,14.3535285237998,19.7444784392264,10.1853516431527,20.1552597658035,8.83689465687879,12.5375898786689,11.1994695955385,9.63518980482114,21.8208146363708,20.6765758156356,14.2211013572687,11.2113817479261,17.3900789534352,8.86922042621219,8.89042942843484,11.0711661765223,15.8481681015439,16.1756907060714,9.97407872150954,20.8252743387616,48.5496691654813,42.1921086042852,34.0290433582969,66.4701581475046,52.5945023418003,45.1524628318973,23.7944985973841,21.6946632809761,21.2914232507551,7.04152209913235,3.70642765846759,3.29529274101708,6.9994763666742,4.05960622713551,7.18762821824858,17.2816084239468,29.7398478224651,24.5348473373999,10.2903774414379,15.7593391966316,12.3761302146586,16.1853168687678,12.1667925232568,21.5502677192101,6.43804610931351,6.22506357277798,5.84934816232909,1.97773272513395,5.6838409195688,6.89080254192331,5.37905627450176,22.8117147078651,13.5005938331691,14.7227472945967,12.5686433137674,13.693849539,14.5764051065795,11.0222291670972,14.7075005857603,20.9220173898839,27.0697156740598,23.8090126547177,14.2437190748609,12.5338071735301,17.1901412283731,16.1926139420801,16.3201156909187,25.8229038742809,24.4541725943144,25.4845308630394,19.0127434741807,14.7666076999709,16.4746001032792,32.7546872232896,24.0918685554788,12.2394840067395,12.4131734076698,16.8941868536394,16.1289679355041,13.6231087527799,20.9629296771011,12.2099422163348,14.4869225549239,19.1547050896285,26.9485602570067,89.181833897326,85.3280043783997,6.27824018932521,5.82727690592727,8.08839112023653,17.9268691158924,40.3943098489588,23.4538579722423,11.6235168933311,8.22056791442781,10.1470818792666,12.5099791658677,24.3408623770909,12.3153259503082,21.2587672251562,31.8118585223806,15.9229899350977,18.4414208940046,17.8881629952919,16.0008833534623,22.3670113461747,80.807499975187,91.3187641706664,27.0784478521107,15.2165208122519,11.3981518888747,13.5965142968179,27.4116870110826,38.8875512395833,35.183218591602,43.8037286884537,39.3801804288709,24.7267773025876,29.3656686152641,27.1911101480345,15.9240922380919,14.1524744722858,12.416069497302,16.5252962562634,13.104419952708,17.4660265911189,22.4550178575215,25.309577684294,26.5195400989639,27.5483070205603,31.0444044886819,4.95806383745537,18.3432897762785,23.4014995138052,12.2749610159442,24.190110682627,21.2433821578522,26.9574598694406,20.6995637491233,6.31991868581911,10.0365683774739,8.52490498186778,15.7415587126981,17.3549284386011,16.2055855314913,21.7805156738393,19.2828947112456,23.2943340459941,20.6955210827863,19.5839583021722,23.9368951852697,21.228220638839,24.2967846837061,29.5901154842373,26.7545976988358,16.4662586468288,24.2913617956273,32.5949420274397,32.7236667366125,39.9806727410396,16.1314845664762,19.6225190492415,18.8111704206955,19.7167215822803,19.1599348392175,19.7916459021935,15.5985013412299,21.8283368310475,16.9639923365731,23.8768448360256,20.6914730922797,22.0309418444606,19.7740269903929,16.2103537406021,24.4943766102872,3.98302592001472,14.6238096140453,13.5249282807697,19.5505274731502,19.7831536910978,23.9864504024889,21.879841844993,21.6986917530015,18.6828486131236,16.2884256376777,13.0439155918346,8.84279060295298,10.2210677458866,9.89393294493356,9.94014594803664,11.576503668116,10.9489116266011,17.5494643844994,16.6999283578286,8.23684239564244,25.8782771749238,21.9563159124417,18.4102227137591,24.2475722829227,16.325164630494,14.473305640901,26.9739657643243,16.1067700004912,18.740972290833,19.5206848641466,19.9486711045227,24.9584323588305,28.3271932654356,33.1727201358258,30.1083125242825,31.8909153094236,34.4422300300172,33.2642528872948,31.7740366633248,31.9674419465141,7.53956419696361,14.1415477792864,14.2611639175521,14.6246475541508,26.3302967579979,28.4824398419054,9.18035694109382,18.6828486131236,19.2460013843917,16.3984272604588,20.8960695800815,17.9226598464414,23.171062104569,30.5722653251939,14.9779959619711,23.380468632905,28.8560077900962,35.6666661228206,24.2717545706139,11.3961986347043,26.8763482933401,28.2098910283036,10.619611067197,12.1390318077491,6.65111825322452,9.24164890803901,7.38254732201932,18.7535440245796,25.5844010236539,18.5402202033528,18.8943610543902,17.6980584444057,12.6502330289999,20.6271086496374,24.5116516142727,21.2472090956946,8.66703181344455,21.2193664681276,22.699549906211,24.2581591938816,27.4796864405542,13.700922710157,21.5897971418614,21.3950391572458,15.6575162619023,39.4078144530137,42.3036797943273,26.9598774428857,18.5027133204862,23.3080077637987,21.2781010739791,25.9595422814714,14.0114122254239,16.0981757011314,13.1488114432495,8.4765805652111,11.6190093562871,11.8964650067392,25.1568076390906,25.8910186798767,27.6399947608848,1.90934123603023,17.7148156405436,19.9253077784312,21.3850574827167,19.0270349373167,18.5608179184251,24.9499040811918,22.15112613439,18.8464278228501,24.8860748720242,19.2615187056947,2.25477175473676,16.4468200648377,14.3948886697675,18.0839605159964,12.2701832303845,18.9230860549672,25.4665207861286,20.3118840356562,20.4475721630136,6.52277126230216,5.76060012515731,21.4887562027161,10.3389859797984,12.3253148597793,17.5393111020023,15.3962958274034,18.2786846398764,18.0293174279953,20.8242233316154,17.0633300412369,19.66135611699,20.1652370273681,22.3178546894033,15.490106504093,21.2715961970455,22.2195775942907,20.422707710414,23.7741720015111,14.1023077745826,22.6031825017663,19.5189774469229,25.4580757731498,19.507522496195,20.0628841614145,49.1334103076848,46.0325236507177,54.9979692901821,41.4166169448287,39.7347861466973,40.7912704590438,35.7761925122857,47.2837263385431,53.4708042601361,57.9891549162038,12.4544817101012,32.3210147454835,19.8050982674796,17.0174701947806,15.9306003597267,14.8913241844511,21.1134391411534,23.0759264107562,28.2408904440797,26.7859044469625,27.8827229879264,24.8986770629621,26.0323390766273,27.7228909913084,30.0961857327414,31.4353836246829,27.0010479451513,26.6214724239913,27.1976694530182,31.7949667490298,23.6579784145937,30.525838659406,24.7973637545214,25.7263157439221,30.3973298741518,27.4997475647949,28.170907822407,28.6745985467249,24.9879569476386,22.4456908663095,30.1332946035402,28.3692909241623,32.7384834535751,28.0435682546598,26.0423924824541,20.4844673909116,23.8610240614317,23.8506869993611,23.9110415086054,22.5003247501906,21.5637087126992|short_description=p1@Jmjd1c}}
|EntrezGene=108829
|HGNC=
|MCL_coexpression_id=1523
|UniProt=G3UYW3
|association_with_transcript=0bp_to_ENSMUST00000174317_5end
|description=CAGE_peak_1_at_Jmjd1c_5end
|id=chr10:66559204..66559282,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!1.73e-07!10;UBERON:0000411!1.73e-07!10;UBERON:0001950!1.73e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.73e-07,10;UBERON:0000411,1.73e-07,10;UBERON:0001950,1.73e-07,10
|phase1_expression=25.9441132309766,25.8241801653127,29.1199513209303,65.6347338535821,64.1146534331324,21.1527882608981,16.1192722010913,25.6955413648737,20.4143647119917,23.1723881058774,8.73211637950075,11.3276465773378,22.9408978107816,19.3199089345984,10.9926221399169,10.7311891716608,4.89693314689703,14.3535285237998,19.7444784392264,10.1853516431527,20.1552597658035,8.83689465687879,12.5375898786689,11.1994695955385,9.63518980482114,21.8208146363708,20.6765758156356,14.2211013572687,11.2113817479261,17.3900789534352,8.86922042621219,8.89042942843484,11.0711661765223,15.8481681015439,16.1756907060714,9.97407872150954,20.8252743387616,48.5496691654813,42.1921086042852,34.0290433582969,66.4701581475046,52.5945023418003,45.1524628318973,23.7944985973841,21.6946632809761,21.2914232507551,7.04152209913235,3.70642765846759,3.29529274101708,6.9994763666742,4.05960622713551,7.18762821824858,17.2816084239468,29.7398478224651,24.5348473373999,10.2903774414379,15.7593391966316,12.3761302146586,16.1853168687678,12.1667925232568,21.5502677192101,6.43804610931351,6.22506357277798,5.84934816232909,1.97773272513395,5.6838409195688,6.89080254192331,5.37905627450176,22.8117147078651,13.5005938331691,14.7227472945967,12.5686433137674,13.693849539,14.5764051065795,11.0222291670972,14.7075005857603,20.9220173898839,27.0697156740598,23.8090126547177,14.2437190748609,12.5338071735301,17.1901412283731,16.1926139420801,16.3201156909187,25.8229038742809,24.4541725943144,25.4845308630394,19.0127434741807,14.7666076999709,16.4746001032792,32.7546872232896,24.0918685554788,12.2394840067395,12.4131734076698,16.8941868536394,16.1289679355041,13.6231087527799,20.9629296771011,12.2099422163348,14.4869225549239,19.1547050896285,26.9485602570067,89.181833897326,85.3280043783997,6.27824018932521,5.82727690592727,8.08839112023653,17.9268691158924,40.3943098489588,23.4538579722423,11.6235168933311,8.22056791442781,10.1470818792666,12.5099791658677,24.3408623770909,12.3153259503082,21.2587672251562,31.8118585223806,15.9229899350977,18.4414208940046,17.8881629952919,16.0008833534623,22.3670113461747,80.807499975187,91.3187641706664,27.0784478521107,15.2165208122519,11.3981518888747,13.5965142968179,27.4116870110826,38.8875512395833,35.183218591602,43.8037286884537,39.3801804288709,24.7267773025876,29.3656686152641,27.1911101480345,15.9240922380919,14.1524744722858,12.416069497302,16.5252962562634,13.104419952708,17.4660265911189,22.4550178575215,25.309577684294,26.5195400989639,27.5483070205603,31.0444044886819,4.95806383745537,18.3432897762785,23.4014995138052,12.2749610159442,24.190110682627,21.2433821578522,26.9574598694406,20.6995637491233,6.31991868581911,10.0365683774739,8.52490498186778,15.7415587126981,17.3549284386011,16.2055855314913,21.7805156738393,19.2828947112456,23.2943340459941,20.6955210827863,19.5839583021722,23.9368951852697,21.228220638839,24.2967846837061,29.5901154842373,26.7545976988358,16.4662586468288,24.2913617956273,32.5949420274397,32.7236667366125,39.9806727410396,16.1314845664762,19.6225190492415,18.8111704206955,19.7167215822803,19.1599348392175,19.7916459021935,15.5985013412299,21.8283368310475,16.9639923365731,23.8768448360256,20.6914730922797,22.0309418444606,19.7740269903929,16.2103537406021,24.4943766102872,3.98302592001472,14.6238096140453,13.5249282807697,19.5505274731502,19.7831536910978,23.9864504024889,21.879841844993,21.6986917530015,18.6828486131236,16.2884256376777,13.0439155918346,8.84279060295298,10.2210677458866,9.89393294493356,9.94014594803664,11.576503668116,10.9489116266011,17.5494643844994,16.6999283578286,8.23684239564244,25.8782771749238,21.9563159124417,18.4102227137591,24.2475722829227,16.325164630494,14.473305640901,26.9739657643243,16.1067700004912,18.740972290833,19.5206848641466,19.9486711045227,24.9584323588305,28.3271932654356,33.1727201358258,30.1083125242825,31.8909153094236,34.4422300300172,33.2642528872948,31.7740366633248,31.9674419465141,7.53956419696361,14.1415477792864,14.2611639175521,14.6246475541508,26.3302967579979,28.4824398419054,9.18035694109382,18.6828486131236,19.2460013843917,16.3984272604588,20.8960695800815,17.9226598464414,23.171062104569,30.5722653251939,14.9779959619711,23.380468632905,28.8560077900962,35.6666661228206,24.2717545706139,11.3961986347043,26.8763482933401,28.2098910283036,10.619611067197,12.1390318077491,6.65111825322452,9.24164890803901,7.38254732201932,18.7535440245796,25.5844010236539,18.5402202033528,18.8943610543902,17.6980584444057,12.6502330289999,20.6271086496374,24.5116516142727,21.2472090956946,8.66703181344455,21.2193664681276,22.699549906211,24.2581591938816,27.4796864405542,13.700922710157,21.5897971418614,21.3950391572458,15.6575162619023,39.4078144530137,42.3036797943273,26.9598774428857,18.5027133204862,23.3080077637987,21.2781010739791,25.9595422814714,14.0114122254239,16.0981757011314,13.1488114432495,8.4765805652111,11.6190093562871,11.8964650067392,25.1568076390906,25.8910186798767,27.6399947608848,1.90934123603023,17.7148156405436,19.9253077784312,21.3850574827167,19.0270349373167,18.5608179184251,24.9499040811918,22.15112613439,18.8464278228501,24.8860748720242,19.2615187056947,2.25477175473676,16.4468200648377,14.3948886697675,18.0839605159964,12.2701832303845,18.9230860549672,25.4665207861286,20.3118840356562,20.4475721630136,6.52277126230216,5.76060012515731,21.4887562027161,10.3389859797984,12.3253148597793,17.5393111020023,15.3962958274034,18.2786846398764,18.0293174279953,20.8242233316154,17.0633300412369,19.66135611699,20.1652370273681,22.3178546894033,15.490106504093,21.2715961970455,22.2195775942907,20.422707710414,23.7741720015111,14.1023077745826,22.6031825017663,19.5189774469229,25.4580757731498,19.507522496195,20.0628841614145,49.1334103076848,46.0325236507177,54.9979692901821,41.4166169448287,39.7347861466973,40.7912704590438,35.7761925122857,47.2837263385431,53.4708042601361,57.9891549162038,12.4544817101012,32.3210147454835,19.8050982674796,17.0174701947806,15.9306003597267,14.8913241844511,21.1134391411534,23.0759264107562,28.2408904440797,26.7859044469625,27.8827229879264,24.8986770629621,26.0323390766273,27.7228909913084,30.0961857327414,31.4353836246829,27.0010479451513,26.6214724239913,27.1976694530182,31.7949667490298,23.6579784145937,30.525838659406,24.7973637545214,25.7263157439221,30.3973298741518,27.4997475647949,28.170907822407,28.6745985467249,24.9879569476386,22.4456908663095,30.1332946035402,28.3692909241623,32.7384834535751,28.0435682546598,26.0423924824541,20.4844673909116,23.8610240614317,23.8506869993611,23.9110415086054,22.5003247501906,21.5637087126992
|short_description=p1@Jmjd1c
}}

Revision as of 17:10, 12 September 2013

Short description:p1@Jmjd1c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Jmjd1c_5end
Coexpression cluster:MCL_coexpression_mm9:1523
Association with transcript: 0bp_to_ENSMUST00000174317_5end
EntrezGene:Jmjd1c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Jmjd1c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I525.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I365.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I464.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.12
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.64
GP2+ M cell, pool1.CNhs13228.11845-124H921.82
GP2+ M cell, pool2.CNhs13231.11846-124I120.68
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B911.21
Ileum epithelium, pool2.CNhs13232.10253-104C117.39
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G848.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G966.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H252.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H445.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.28
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.58
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D914.77
Mouse Schwann, donor2.CNhs12573.11746-123F916.47
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.13
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I889.18
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.93
accessory axillary lymph node, adult.CNhs10475.1063-29H940.39
adrenal gland, adult.CNhs10508.49-24D723.45
adrenal gland, embryo E14.CNhs11038.406-44C511.62
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F512.51
adrenal gland, neonate N00.CNhs11191.1311-23C124.34
adrenal gland, neonate N25.CNhs11223.1377-27I312.32
amnion, adult pregnant day17.5.CNhs10488.583-22A821.26
aorta, adult.CNhs10498.46-23H131.81
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F518.44
bone (os femoris), neonate N16.CNhs11225.1525-43A617.89
bone (os femoris), neonate N20.CNhs11195.1350-25C316.00
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B280.81
cerebellum, neonate N30.CNhs11135.1395-42I291.32
colon, adult.CNhs10468.36-18H727.08
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.60
corpora quadrigemina, adult.CNhs10501.16-22A427.41
corpus striatum, adult.CNhs10487.19-21D838.89
corpus striatum, neonate N00.CNhs11226.630-43F135.18
cortex, adult.CNhs10473.12-14D543.80
cortex, neonate N30.CNhs11107.1392-42F239.38
diencephalon, adult.CNhs10482.20-12F224.73
diencephalon, neonate N30.CNhs11201.1388-42B229.37
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.92
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C616.53
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C625.31
eyeball, neonate N01.CNhs11140.1532-43E726.52
eyeball, neonate N02.CNhs11205.1551-44G827.55
eyeball, neonate N16.CNhs11188.777-19A231.04
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H218.34
forelimb, embryo E13.CNhs10589.384-1E223.40
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E724.19
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B526.96
gonad, embryo E13.CNhs11044.1564-45I620.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.52
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F517.35
heart, embryo E13.CNhs11013.376-3I916.21
heart, embryo E14.CNhs10597.403-26D421.78
heart, embryo E15.CNhs11017.431-16C819.28
heart, embryo E16.CNhs11021.457-17C623.29
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G319.58
heart, neonate N00.CNhs11213.639-21E323.94
heart, neonate N03.CNhs11221.1349-25I221.23
heart, neonate N10.CNhs11118.749-24G124.30
heart, neonate N16.CNhs11209.782-15G129.59
heart, neonate N20.CNhs11127.821-26I626.75
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D224.29
hippocampus, adult.CNhs10478.13-16E832.59
hippocampus, neonate N00.CNhs11228.627-43G132.72
intestinal mucosa, adult.CNhs10506.860-29I339.98
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I519.62
intestine, embryo E13.CNhs11010.381-16D518.81
intestine, embryo E15.CNhs10602.976-16D819.72
intestine, embryo E16.CNhs10585.463-22H419.16
intestine, embryo E17.CNhs10582.482-18D319.79
intestine, embryo E18.CNhs10526.1289-20F715.60
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E916.96
intestine, neonate N06.CNhs11102.688-20B823.88
intestine, neonate N07.CNhs11095.720-20F220.69
intestine, neonate N10.CNhs11098.755-23A522.03
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E316.21
intestine, neonate N30.CNhs11131.1384-42G124.49
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F814.62
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I219.55
kidney, embryo E18.CNhs11001.1288-20C719.78
kidney, neonate N00.CNhs11214.646-21G723.99
kidney, neonate N10.CNhs11206.758-6D521.88
kidney, neonate N20.CNhs11113.832-19I121.70
kidney, neonate N25.CNhs11122.1353-25F318.68
kidney, neonate N30.CNhs11203.1385-42H116.29
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F88.84
liver, embryo E13.CNhs10524.378-3H610.22
liver, embryo E14.CNhs10594.409-16E19.89
liver, embryo E15.CNhs10520.433-16D79.94
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F416.70
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B918.41
liver, neonate N20.CNhs11220.823-25A324.25
liver, neonate N25.CNhs11198.1368-26H116.33
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B126.97
lung, embryo E12.CNhs10522.354-16G216.11
lung, embryo E14.CNhs10604.404-26F818.74
lung, embryo E15.CNhs11020.432-17C519.52
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A624.96
lung, embryo E18.CNhs10583.1287-20I628.33
lung, neonate N00.CNhs11224.640-42C633.17
lung, neonate N06.CNhs11212.683-20E530.11
lung, neonate N07.CNhs11111.715-19A331.89
lung, neonate N10.CNhs11219.750-23E634.44
lung, neonate N20.CNhs11109.822-18A433.26
lung, neonate N25.CNhs11119.1359-25C731.77
lung, neonate N30.CNhs11133.1394-42H231.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C226.33
medulla oblongata, neonate N30.CNhs11200.1396-42A328.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.68
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.17
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.86
olfactory brain, adult.CNhs10489.18-22I935.67
ovary, adult.CNhs10507.91-2I724.27
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I426.88
oviduct, adult pregnant day01.CNhs10500.988-6G628.21
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E59.24
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I718.75
pancreas, neonate N00.CNhs11105.645-26G925.58
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B617.70
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G824.51
pituitary gland, embryo E12.CNhs11018.346-16E621.25
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A521.22
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F624.26
pituitary gland, embryo E17.CNhs11039.1265-44F527.48
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I721.59
placenta, adult pregnant day17.CNhs10464.577-18G321.40
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C339.41
skin, neonate N00.CNhs11124.650-25G442.30
skin, neonate N03.CNhs11215.662-22H326.96
skin, neonate N06.CNhs11097.693-20I518.50
skin, neonate N10.CNhs11108.762-6C423.31
small intestine, neonate N16.CNhs11114.790-21I121.28
spinal cord, adult.CNhs10505.24-13C925.96
spleen, adult.CNhs10465.25-2G214.01
spleen, embryo E16.CNhs11035.461-43C116.10
spleen, embryo E18.CNhs11011.1271-21F213.15
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H111.62
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.64
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E317.71
stomach, embryo E15.CNhs10603.1252-16G819.93
stomach, embryo E16.CNhs11022.459-17D421.39
stomach, embryo E17.CNhs11006.1035-18D519.03
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B824.95
stomach, neonate N07.CNhs11210.718-18A922.15
stomach, neonate N25.CNhs11104.1355-25E418.85
stomach, neonate N30.CNhs11134.1386-42I124.89
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F516.45
testis, embryo E15.CNhs11034.443-27C514.39
testis, embryo E16.CNhs11033.470-26G518.08
testis, embryo E17.CNhs11029.486-18I512.27
testis, embryo E18.CNhs11027.503-18G518.92
testis, neonate N00.CNhs11189.1300-22B725.47
testis, neonate N07.CNhs11222.726-26I420.31
testis, neonate N10.CNhs11204.763-44D920.45
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B521.49
thymus, embryo E14.CNhs11041.402-44I410.34
thymus, embryo E15.CNhs11005.430-45I212.33
thymus, embryo E16.CNhs11002.456-26C517.54
thymus, embryo E17.CNhs10581.478-18C115.40
thymus, embryo E18.CNhs10595.1273-19G418.28
thymus, neonate N02.CNhs11181.1541-43F818.03
thymus, neonate N03.CNhs11137.2104-43C720.82
thymus, neonate N06.CNhs11197.681-26C417.06
thymus, neonate N07.CNhs11211.713-19D319.66
thymus, neonate N10.CNhs11194.748-24E420.17
thymus, neonate N20.CNhs11186.820-7A222.32
thymus, neonate N25.CNhs11125.1362-25G715.49
thymus, neonate N30.CNhs11132.1393-42G221.27
tongue, adult.CNhs10499.32-1B422.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.10
urinary bladder, adult.CNhs10481.879-12E422.60
uterus, adult pregnant day19.CNhs10497.590-15F519.52
uterus, adult.CNhs10509.92-27E525.46
vagina, adult.CNhs10502.89-27D519.51
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A355.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D741.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A853.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A957.99
whole body, embryo E11.CNhs11014.324-5I812.45
whole body, embryo E12.CNhs10587.857-27C932.32
whole body, embryo E13.CNhs10512.372-23H219.81
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.44
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.80
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.50
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G532.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.04
whole body, embryo E17.5.CNhs10513.490-9F926.04
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B323.86
whole body, neonate N00.CNhs10525.657-19C223.85
whole body, neonate N01.CNhs10576.659-23C623.91
whole body, neonate N06.CNhs10515.692-21D122.50
whole body, neonate N10.CNhs10518.761-6B421.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.73e-0710
visual cortex1.73e-0710
neocortex1.73e-0710







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:66559204..66559282,%2B&oldid=2878949"