FFCP PHASE1:Mm9::chr11:115738811..115738862,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=24|UniProt=F6YB52|association_with_transcript=0bp_to_ENSMUST00000144032,ENSMUST00000151507_5end|description=CAGE_peak_1_at_ENSMUST00000144032_5end,CAGE_peak_1_at_ENSMUST00000151507_5end|id=chr11:115738811..115738862,+|ontology_enrichment_celltype=CL:0002563!1.29e-07!9;CL:0002251!1.29e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.03e-08,9;CL:0002251,1.03e-08,9;CL:0000239,5.37e-07,6;CL:0000677,5.37e-07,6;CL:0000584,5.37e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.76e-30!59;UBERON:0000160!1.28e-28!43;UBERON:0004119!1.19e-13!130;UBERON:0000925!1.19e-13!130;UBERON:0006595!1.19e-13!130;UBERON:0001007!4.06e-13!128;UBERON:0001555!4.06e-13!128;UBERON:0007026!4.06e-13!128;UBERON:0004921!4.32e-12!126;UBERON:0004185!4.32e-12!126;UBERON:0000344!5.59e-12!15;UBERON:0001242!1.18e-10!13;UBERON:0000060!1.18e-10!13;UBERON:0001262!1.18e-10!13;UBERON:0004786!1.18e-10!13;UBERON:0004923!5.81e-10!24;UBERON:0002108!1.83e-09!16;UBERON:0003350!1.29e-07!9;UBERON:0004808!1.29e-07!9;UBERON:0001277!1.29e-07!9;UBERON:0001045!2.49e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.47e-27,31;UBERON:0005409,1.56e-26,47;UBERON:0000344,7.37e-14,15;UBERON:0001242,2.70e-12,13;UBERON:0001262,2.70e-12,13;UBERON:0004786,2.70e-12,13;UBERON:0004923,3.53e-11,24;UBERON:0003350,1.03e-08,9;UBERON:0004808,1.03e-08,9;UBERON:0001277,1.03e-08,9;UBERON:0004119,6.78e-07,118;UBERON:0000925,6.78e-07,118;UBERON:0006595,6.78e-07,118;UBERON:0001264,9.51e-07,12|phase1_expression=0,678.408192450918,623.803957203054,1110.34611970737,1195.63810738193,129.434918644067,186.656499835825,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,203.030384524833,196.833163155632,440.43591647622,305.841017272943,251.454928544433,378.526651557097,292.60698065128,148.781172649709,0,0,0,17.908800424579,21.1117999605285,21.2336130512864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,18.8195522976547,0,0,0,0,0,0,0,0,0.506719730950197,0,43.846609812119,0,0,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0.628332956648377,215.059621928905,0,0,0,0,0,311.274241234264,0,0,398.002092014985,0,0,0.254140454146129,0,0,0,0,0,0,0,2.24046600470696,1.11966273549084,6.82351447770922,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,738.155561185805,287.457765963273,2.55945900642281,3.71578674976702,46.6500209985978,165.582173715764,227.715116897147,234.738422622898,329.797697773436,278.83533034775,215.896944359432,247.30289474715,246.04467794433,361.325402278997,248.558757355898,284.772020753745,1.32767530667157,2.51346727741403,11.270773567308,8.34970444165788,11.2492442557223,12.2737684808057,18.4650688402831,25.3889454524916,27.631776100082,37.0191491765402,1.48226313543574,0.667380422864376,1.17935397067922,0.224862112384854,0,0.482354319504834,0.25462585178142,0.287696137450811,6.48540907100142,3.29473695825698,2.87536413054709,5.95425516269605,0.624075346229121,1.76805214562978,0.896987067609561,0,0,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.81443479676788,0,14.6019652173959,0.242780636154981,4.23252979750651,35.6463600738647,93.0200962574434,75.3216112462622,85.0229084523448,11.2695456138027,16.0423820273125,57.2026531863827,17.9211634577498,18.5643977846736,0,0,0,0,0,0,0,0,2.3467170806371,5.50763384245932,0,0,0,0.0603129249281559,0,1.47726809770555,315.965226906758,0,0,1.857481811669,1.11116716421827,0,0,0.228778173206523,0.169978429993855,0,0,20.0480829783174,0.158167996790568,3.65975040828328,16.308806464092,8.78170843260769,23.5831568845872,14.1607563704062,15.0429289420111,8.63794608547298,343.609294196543,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0.39736270956253,0.360586348559907,0,0.201932899896295,0.457240839929999,0.201652370273681,0.877120926657772,1.05833025804362,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,1.21553358534147,1.25767897576789,9.00833191405069,14.6682840349066,15.2465942356782,16.6877988987744,12.3821633764261,13.1809235942925,13.3924702384114,10.0196412992774,9.92389862275474,11.429658322167,13.8125170472091,13.7902347874378,9.64546102318525,11.9504911232959,14.8670909335741,11.6575545811041,10.6485483695602,11.4449371174714,12.2090989971156,11.951891312747,10.9152844180263,12.2561741824758,11.3119975918272,12.4939784738193,17.9565526930476,12.3380418849141,12.9040871911988,12.6861623382604,11.0005157242036,14.2750892126045,0,14.2698281151699,22.9912027831679,1.14772999241306,0.661774257358546,0.463735671240843|short_description=p1@ENSMUST00000144032,p1@ENSMUST00000151507}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=F6YB52 | |||
|association_with_transcript=0bp_to_ENSMUST00000144032,ENSMUST00000151507_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000144032_5end,CAGE_peak_1_at_ENSMUST00000151507_5end | |||
|id=chr11:115738811..115738862,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.29e-07!9;CL:0002251!1.29e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.03e-08,9;CL:0002251,1.03e-08,9;CL:0000239,5.37e-07,6;CL:0000677,5.37e-07,6;CL:0000584,5.37e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.76e-30!59;UBERON:0000160!1.28e-28!43;UBERON:0004119!1.19e-13!130;UBERON:0000925!1.19e-13!130;UBERON:0006595!1.19e-13!130;UBERON:0001007!4.06e-13!128;UBERON:0001555!4.06e-13!128;UBERON:0007026!4.06e-13!128;UBERON:0004921!4.32e-12!126;UBERON:0004185!4.32e-12!126;UBERON:0000344!5.59e-12!15;UBERON:0001242!1.18e-10!13;UBERON:0000060!1.18e-10!13;UBERON:0001262!1.18e-10!13;UBERON:0004786!1.18e-10!13;UBERON:0004923!5.81e-10!24;UBERON:0002108!1.83e-09!16;UBERON:0003350!1.29e-07!9;UBERON:0004808!1.29e-07!9;UBERON:0001277!1.29e-07!9;UBERON:0001045!2.49e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.47e-27,31;UBERON:0005409,1.56e-26,47;UBERON:0000344,7.37e-14,15;UBERON:0001242,2.70e-12,13;UBERON:0001262,2.70e-12,13;UBERON:0004786,2.70e-12,13;UBERON:0004923,3.53e-11,24;UBERON:0003350,1.03e-08,9;UBERON:0004808,1.03e-08,9;UBERON:0001277,1.03e-08,9;UBERON:0004119,6.78e-07,118;UBERON:0000925,6.78e-07,118;UBERON:0006595,6.78e-07,118;UBERON:0001264,9.51e-07,12 | |||
|phase1_expression=0,678.408192450918,623.803957203054,1110.34611970737,1195.63810738193,129.434918644067,186.656499835825,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,203.030384524833,196.833163155632,440.43591647622,305.841017272943,251.454928544433,378.526651557097,292.60698065128,148.781172649709,0,0,0,17.908800424579,21.1117999605285,21.2336130512864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,18.8195522976547,0,0,0,0,0,0,0,0,0.506719730950197,0,43.846609812119,0,0,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0.628332956648377,215.059621928905,0,0,0,0,0,311.274241234264,0,0,398.002092014985,0,0,0.254140454146129,0,0,0,0,0,0,0,2.24046600470696,1.11966273549084,6.82351447770922,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,738.155561185805,287.457765963273,2.55945900642281,3.71578674976702,46.6500209985978,165.582173715764,227.715116897147,234.738422622898,329.797697773436,278.83533034775,215.896944359432,247.30289474715,246.04467794433,361.325402278997,248.558757355898,284.772020753745,1.32767530667157,2.51346727741403,11.270773567308,8.34970444165788,11.2492442557223,12.2737684808057,18.4650688402831,25.3889454524916,27.631776100082,37.0191491765402,1.48226313543574,0.667380422864376,1.17935397067922,0.224862112384854,0,0.482354319504834,0.25462585178142,0.287696137450811,6.48540907100142,3.29473695825698,2.87536413054709,5.95425516269605,0.624075346229121,1.76805214562978,0.896987067609561,0,0,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.81443479676788,0,14.6019652173959,0.242780636154981,4.23252979750651,35.6463600738647,93.0200962574434,75.3216112462622,85.0229084523448,11.2695456138027,16.0423820273125,57.2026531863827,17.9211634577498,18.5643977846736,0,0,0,0,0,0,0,0,2.3467170806371,5.50763384245932,0,0,0,0.0603129249281559,0,1.47726809770555,315.965226906758,0,0,1.857481811669,1.11116716421827,0,0,0.228778173206523,0.169978429993855,0,0,20.0480829783174,0.158167996790568,3.65975040828328,16.308806464092,8.78170843260769,23.5831568845872,14.1607563704062,15.0429289420111,8.63794608547298,343.609294196543,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0.39736270956253,0.360586348559907,0,0.201932899896295,0.457240839929999,0.201652370273681,0.877120926657772,1.05833025804362,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,1.21553358534147,1.25767897576789,9.00833191405069,14.6682840349066,15.2465942356782,16.6877988987744,12.3821633764261,13.1809235942925,13.3924702384114,10.0196412992774,9.92389862275474,11.429658322167,13.8125170472091,13.7902347874378,9.64546102318525,11.9504911232959,14.8670909335741,11.6575545811041,10.6485483695602,11.4449371174714,12.2090989971156,11.951891312747,10.9152844180263,12.2561741824758,11.3119975918272,12.4939784738193,17.9565526930476,12.3380418849141,12.9040871911988,12.6861623382604,11.0005157242036,14.2750892126045,0,14.2698281151699,22.9912027831679,1.14772999241306,0.661774257358546,0.463735671240843 | |||
|short_description=p1@ENSMUST00000144032,p1@ENSMUST00000151507 | |||
}} |
Revision as of 18:47, 12 September 2013
Short description: | p1@ENSMUST00000144032, p1@ENSMUST00000151507 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000144032_5end, CAGE_peak_1_at_ENSMUST00000151507_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000144032, ENSMUST00000151507_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.03e-08 | 9 |
epithelial cell of alimentary canal | 1.03e-08 | 9 |
brush border epithelial cell | 5.37e-07 | 6 |
gut absorptive cell | 5.37e-07 | 6 |
enterocyte | 5.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.47e-27 | 31 |
gastrointestinal system | 1.56e-26 | 47 |
mucosa | 7.37e-14 | 15 |
intestinal mucosa | 2.70e-12 | 13 |
wall of intestine | 2.70e-12 | 13 |
gastrointestinal system mucosa | 2.70e-12 | 13 |
organ component layer | 3.53e-11 | 24 |
epithelium of mucosa | 1.03e-08 | 9 |
gastrointestinal system epithelium | 1.03e-08 | 9 |
intestinal epithelium | 1.03e-08 | 9 |
endoderm-derived structure | 6.78e-07 | 118 |
endoderm | 6.78e-07 | 118 |
presumptive endoderm | 6.78e-07 | 118 |
pancreas | 9.51e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.