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FFCP PHASE1:Mm9::chr11:117687247..117687283,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71562|HGNC=|MCL_coexpression_id=8|UniProt=B1AQL0|association_with_transcript=-4bp_to_ENSMUST00000149668_5end|description=CAGE_peak_4_at_Afmid_5end|id=chr11:117687247..117687283,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!9.81e-17!49;UBERON:0005173!9.81e-17!49;UBERON:0002417!9.81e-17!49;UBERON:0000916!9.81e-17!49;UBERON:0003914!8.29e-13!47;UBERON:0009569!3.87e-12!66;UBERON:0002107!9.94e-12!22;UBERON:0007499!9.94e-12!22;UBERON:0006925!9.94e-12!22;UBERON:0009497!9.94e-12!22;UBERON:0000015!9.94e-12!22;UBERON:0002423!9.94e-12!22;UBERON:0006235!9.94e-12!22;UBERON:0008835!9.94e-12!22;UBERON:0003894!9.94e-12!22;UBERON:0004161!9.94e-12!22;UBERON:0008836!9.94e-12!22;UBERON:0009854!1.57e-10!23;UBERON:0009856!1.57e-10!23;UBERON:0000926!1.84e-09!193;UBERON:0004120!1.84e-09!193;UBERON:0006603!1.84e-09!193;UBERON:0002365!1.71e-08!25;UBERON:0002330!1.71e-08!25;UBERON:0005177!3.95e-08!85;UBERON:0005256!3.06e-07!47;UBERON:0003104!3.55e-07!131;UBERON:0009142!3.55e-07!131;UBERON:0000466!5.64e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.06e-18,49;UBERON:0005173,1.06e-18,49;UBERON:0002417,1.06e-18,49;UBERON:0000916,1.06e-18,49;UBERON:0002107,2.63e-15,22;UBERON:0007499,2.63e-15,22;UBERON:0006925,2.63e-15,22;UBERON:0009497,2.63e-15,22;UBERON:0000015,2.63e-15,22;UBERON:0002423,2.63e-15,22;UBERON:0006235,2.63e-15,22;UBERON:0008835,2.63e-15,22;UBERON:0003894,2.63e-15,22;UBERON:0004161,2.63e-15,22;UBERON:0008836,2.63e-15,22;UBERON:0009854,2.42e-14,23;UBERON:0009856,2.42e-14,23;UBERON:0003914,4.08e-14,47;UBERON:0002365,1.18e-12,25;UBERON:0002330,1.18e-12,25;UBERON:0009569,2.89e-12,66;UBERON:0003104,8.42e-11,61;UBERON:0009142,8.42e-11,61;UBERON:0005177,2.00e-10,79;UBERON:0005256,6.00e-09,45;UBERON:0002100,1.90e-08,90;UBERON:0001041,4.26e-07,80|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0,0,0,0,0,0,0,0,1.66554880907831,2.83465374345756,5.59649502502517,0.157731082679119,0.274228867211478,0,2.38121212422995,0,0.261199789138935,0.47997726838022,0.45881856213434,0,0,0,0,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0.577703239502549,0.664938581433969,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,2.20256102594018,0.782391344348039,1.09012578190223,0,0.388859798148567,0.419959264876088,7.18762821824858,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,1.05798195854407,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0.270011876663381,0.420649922702764,0,0.441737081903227,0.367472397644862,0.479227355091182,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0.151143120213571,0.579728977403356,24.9522924324602,24.478968013479,15.6513925574967,25.3412802804591,30.4658283226188,8.00533194750986,1.70430322578058,1.81850203222008,1.7666978725517,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,13.35951392713,0.517875767294343,0.890652834388949,1.90833859442749,2.43572382649713,0.691846491768175,0.452167921657868,1.05829836422134,2.13633205260448,0.494389935468748,0,3.5384422077995,0.808834249737046,0.220841518460394,2.90925151881133,0,0,0,0.255457055208591,0.11981512450592,0,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.509196819251581,1.36847667671102,0.758168275301024,0,0.910843100738926,0.459804208866946,0.180062129805349,0.60281927134286,0.680364991513279,0.512454881139399,0.655912071918102,0.258703370739016,0.862271971731369,0.756424320671277,0.703804496655795,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,0,0.257347907114715,0,1.86413195281952,1.40715635988658,2.34080679899319,1.42046841351126,2.16440654922144,1.54267112887378,2.32533944750408,1.3413670069981,1.40118410840603,1.31647879930784,0.656669856316381,0.729619285912702,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,0,0.264450566663544,0.639864751605702,0.696710015581316,1.15980715189884,1.61346819698674,1.11189021922435,0.760902504450237,0.949058123089023,0.823494773620054,0.754005626400808,1.39269530428806,0.58489226135736,0,0.216138049874694,0.796565093017469,0.758671603812327,0.685491075658373,1.1270773567308,0.814605311381257,0.775809948670503,1.05203729835478,2.90888070771584,6.4948465111025,3.767969468193,3.82531208157582,31.7204310983249,0.500535317148282,0.786235980452812,0.899448449539415,1.42002084971952,3.37648023653384,2.5462585178142,5.17853047411459,5.83686816390127,8.51140380883053,5.75072826109418,11.5363693777236,21.2185617717901,22.7320990152401,19.9131129009323,39.0779252304327,0,0.189491411770485,0.325929952884052,0.509235257325564,0.704070744865506,1.00503754465089,0.238043640886014,0.390267295715598,0.945810864637146,0.44292937929755,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.983609672260053,0.504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|EntrezGene=71562
|HGNC=
|MCL_coexpression_id=8
|UniProt=B1AQL0
|association_with_transcript=-4bp_to_ENSMUST00000149668_5end
|description=CAGE_peak_4_at_Afmid_5end
|id=chr11:117687247..117687283,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!9.81e-17!49;UBERON:0005173!9.81e-17!49;UBERON:0002417!9.81e-17!49;UBERON:0000916!9.81e-17!49;UBERON:0003914!8.29e-13!47;UBERON:0009569!3.87e-12!66;UBERON:0002107!9.94e-12!22;UBERON:0007499!9.94e-12!22;UBERON:0006925!9.94e-12!22;UBERON:0009497!9.94e-12!22;UBERON:0000015!9.94e-12!22;UBERON:0002423!9.94e-12!22;UBERON:0006235!9.94e-12!22;UBERON:0008835!9.94e-12!22;UBERON:0003894!9.94e-12!22;UBERON:0004161!9.94e-12!22;UBERON:0008836!9.94e-12!22;UBERON:0009854!1.57e-10!23;UBERON:0009856!1.57e-10!23;UBERON:0000926!1.84e-09!193;UBERON:0004120!1.84e-09!193;UBERON:0006603!1.84e-09!193;UBERON:0002365!1.71e-08!25;UBERON:0002330!1.71e-08!25;UBERON:0005177!3.95e-08!85;UBERON:0005256!3.06e-07!47;UBERON:0003104!3.55e-07!131;UBERON:0009142!3.55e-07!131;UBERON:0000466!5.64e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.06e-18,49;UBERON:0005173,1.06e-18,49;UBERON:0002417,1.06e-18,49;UBERON:0000916,1.06e-18,49;UBERON:0002107,2.63e-15,22;UBERON:0007499,2.63e-15,22;UBERON:0006925,2.63e-15,22;UBERON:0009497,2.63e-15,22;UBERON:0000015,2.63e-15,22;UBERON:0002423,2.63e-15,22;UBERON:0006235,2.63e-15,22;UBERON:0008835,2.63e-15,22;UBERON:0003894,2.63e-15,22;UBERON:0004161,2.63e-15,22;UBERON:0008836,2.63e-15,22;UBERON:0009854,2.42e-14,23;UBERON:0009856,2.42e-14,23;UBERON:0003914,4.08e-14,47;UBERON:0002365,1.18e-12,25;UBERON:0002330,1.18e-12,25;UBERON:0009569,2.89e-12,66;UBERON:0003104,8.42e-11,61;UBERON:0009142,8.42e-11,61;UBERON:0005177,2.00e-10,79;UBERON:0005256,6.00e-09,45;UBERON:0002100,1.90e-08,90;UBERON:0001041,4.26e-07,80
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0,0,0,0,0,0,0,0,1.66554880907831,2.83465374345756,5.59649502502517,0.157731082679119,0.274228867211478,0,2.38121212422995,0,0.261199789138935,0.47997726838022,0.45881856213434,0,0,0,0,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0.577703239502549,0.664938581433969,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,2.20256102594018,0.782391344348039,1.09012578190223,0,0.388859798148567,0.419959264876088,7.18762821824858,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,1.05798195854407,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0.270011876663381,0.420649922702764,0,0.441737081903227,0.367472397644862,0.479227355091182,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0.151143120213571,0.579728977403356,24.9522924324602,24.478968013479,15.6513925574967,25.3412802804591,30.4658283226188,8.00533194750986,1.70430322578058,1.81850203222008,1.7666978725517,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,13.35951392713,0.517875767294343,0.890652834388949,1.90833859442749,2.43572382649713,0.691846491768175,0.452167921657868,1.05829836422134,2.13633205260448,0.494389935468748,0,3.5384422077995,0.808834249737046,0.220841518460394,2.90925151881133,0,0,0,0.255457055208591,0.11981512450592,0,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.509196819251581,1.36847667671102,0.758168275301024,0,0.910843100738926,0.459804208866946,0.180062129805349,0.60281927134286,0.680364991513279,0.512454881139399,0.655912071918102,0.258703370739016,0.862271971731369,0.756424320671277,0.703804496655795,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,0,0.257347907114715,0,1.86413195281952,1.40715635988658,2.34080679899319,1.42046841351126,2.16440654922144,1.54267112887378,2.32533944750408,1.3413670069981,1.40118410840603,1.31647879930784,0.656669856316381,0.729619285912702,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,0,0.264450566663544,0.639864751605702,0.696710015581316,1.15980715189884,1.61346819698674,1.11189021922435,0.760902504450237,0.949058123089023,0.823494773620054,0.754005626400808,1.39269530428806,0.58489226135736,0,0.216138049874694,0.796565093017469,0.758671603812327,0.685491075658373,1.1270773567308,0.814605311381257,0.775809948670503,1.05203729835478,2.90888070771584,6.4948465111025,3.767969468193,3.82531208157582,31.7204310983249,0.500535317148282,0.786235980452812,0.899448449539415,1.42002084971952,3.37648023653384,2.5462585178142,5.17853047411459,5.83686816390127,8.51140380883053,5.75072826109418,11.5363693777236,21.2185617717901,22.7320990152401,19.9131129009323,39.0779252304327,0,0.189491411770485,0.325929952884052,0.509235257325564,0.704070744865506,1.00503754465089,0.238043640886014,0.390267295715598,0.945810864637146,0.44292937929755,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.983609672260053,0.504941854408746,0.94652465824877,0,1.50796378412959,0.955875191810208,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.395287777946524,0,0.283880170416537,1.24645922567079,1.79175655288934,0.494910368917606,0,0.728341908464944,1.209294227859,0.377210159511796,0,0.922305443831782,0.516856586336442,1.81766864738753,1.06949213515416,0.316036757935816,0,0,0,1.44048875225048,0.646793418913773,0,0,1.07021290561242,0.493647061806363,0.913394847343798,0.938686832254841,0,0,0,0.484393280087717,0.422190474497091,0,0.164140899745061,0.582961673259701,0,2.05045056957423,0.412773735926445,1.11116716421827,7.15800136617826,4.37421528707281,3.88922894451088,0.169978429993855,0.139951452323658,0,2.86401185404534,1.58167996790568,0.609958401380546,0.972048067396211,1.46361807210128,1.31017538247707,1.61837215661785,2.39695021603474,1.30877970992015,0.388844919875379,0,0,1.04661582230785,0.992750942742586,0.972255941720238,0.774958940866387,1.520605129417,1.5256441023948,1.3020438484395,1.57289016638566,0.483168241652012,0.288030006257865,0.632022241256357,1.41907650703115,1.02710957164827,0.649604114888975,0.537080087002444,0.993406773906324,0.360586348559907,0.295379054349154,0.100966449948148,1.06689529317,0.302478555410522,0.877120926657772,0.769694733122636,0.350630706544707,0,0.887943813496259,0.538283139656854,0.335769232728157,0.19318959403219,0.375364950902364,0.549454872801795,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.853668028770671,0.972426868273176,0.838452650511929,0.183843508450014,0.888986911206461,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,0.655490552289177,1.28050304809739,1.03383844120104,0.952587382566147,0.695305955669133,0.77163688185482,0.824171801606613,1.03039244094078,0.342869252385415,0.887379030796687,1.1921809497366,0.581385666529314,0.376437521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|short_description=p4@Afmid
}}

Revision as of 18:56, 12 September 2013

Short description:p4@Afmid
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Afmid_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -4bp_to_ENSMUST00000149668_5end
EntrezGene:Afmid
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Afmid

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.36
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B231.72
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B921.22
liver, neonate N20.CNhs11220.823-25A322.73
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D139.08
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element1.06e-1849
abdominal segment element1.06e-1849
abdominal segment of trunk1.06e-1849
abdomen1.06e-1849
liver2.63e-1522
epithelial sac2.63e-1522
digestive gland2.63e-1522
epithelium of foregut-midgut junction2.63e-1522
anatomical boundary2.63e-1522
hepatobiliary system2.63e-1522
foregut-midgut junction2.63e-1522
hepatic diverticulum2.63e-1522
liver primordium2.63e-1522
septum transversum2.63e-1522
liver bud2.63e-1522
digestive tract diverticulum2.42e-1423
sac2.42e-1423
epithelial tube4.08e-1447
exocrine gland1.18e-1225
exocrine system1.18e-1225
subdivision of trunk2.89e-1266
mesenchyme8.42e-1161
entire embryonic mesenchyme8.42e-1161
trunk region element2.00e-1079
trunk mesenchyme6.00e-0945
trunk1.90e-0890
foregut4.26e-0780







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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