FFCP PHASE1:Mm9::chr11:45793728..45793735,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=214105|HGNC=|MCL_coexpression_id=0|UniProt=Q8CGW4,Q5SUH8|association_with_transcript=-76bp_to_ENSMUST00000049038,NM_173384,uc011xtj.1_5end|description=CAGE_peak_4_at_Sox30_5end|id=chr11:45793728..45793735,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!2.86e-07!17;UBERON:0009196!2.86e-07!17;UBERON:0009117!2.86e-07!17;UBERON:0000991!8.27e-07!18;UBERON:0005564!8.27e-07!18;UBERON:0000473!8.92e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.96e-09,14;UBERON:0003135,7.04e-09,15;UBERON:0003101,2.16e-08,16;UBERON:0000079,2.16e-08,16;UBERON:0004176,5.82e-08,17;UBERON:0009196,5.82e-08,17;UBERON:0009117,5.82e-08,17;UBERON:0000991,1.41e-07,18;UBERON:0005564,1.41e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,14.6560164057889,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0.966336483304024,6.91272015018877,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0.952587382566147,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p4@Sox30}} | ||
|EntrezGene=214105 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q8CGW4,Q5SUH8 | |||
|association_with_transcript=-76bp_to_ENSMUST00000049038,NM_173384,uc011xtj.1_5end | |||
|description=CAGE_peak_4_at_Sox30_5end | |||
|id=chr11:45793728..45793735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!2.86e-07!17;UBERON:0009196!2.86e-07!17;UBERON:0009117!2.86e-07!17;UBERON:0000991!8.27e-07!18;UBERON:0005564!8.27e-07!18;UBERON:0000473!8.92e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.96e-09,14;UBERON:0003135,7.04e-09,15;UBERON:0003101,2.16e-08,16;UBERON:0000079,2.16e-08,16;UBERON:0004176,5.82e-08,17;UBERON:0009196,5.82e-08,17;UBERON:0009117,5.82e-08,17;UBERON:0000991,1.41e-07,18;UBERON:0005564,1.41e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,14.6560164057889,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0.966336483304024,6.91272015018877,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0.952587382566147,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p4@Sox30 | |||
}} |
Revision as of 19:42, 12 September 2013
Short description: | p4@Sox30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sox30_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -76bp_to_ENSMUST00000049038, NM_173384, uc011xtj.1_5end |
EntrezGene: | Sox30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.96e-09 | 14 |
male reproductive organ | 7.04e-09 | 15 |
male organism | 2.16e-08 | 16 |
male reproductive system | 2.16e-08 | 16 |
external genitalia | 5.82e-08 | 17 |
indifferent external genitalia | 5.82e-08 | 17 |
indifferent gonad | 5.82e-08 | 17 |
gonad | 1.41e-07 | 18 |
gonad primordium | 1.41e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.