FFCP PHASE1:Mm9::chr11:62352759..62352766,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73139|HGNC=|UniProt=Q9CXS4|association_with_transcript=0bp_to_ENSMUST00000018653,NM_028448,uc007jjf.2_5end|description=CAGE_peak_5_at_Cenpv_5end|id=chr11:62352759..62352766,-|ontology_enrichment_celltype=CL:0002563!4.46e-07!9;CL:0002251!4.46e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.97e-12,9;CL:0002251,2.97e-12,9;CL:0002250,7.44e-08,3;CL:0000473,2.29e-07,7;CL:0000117,2.33e-07,23;CL:0000337,2.33e-07,23;CL:0000066,2.76e-07,25;CL:0000682,5.08e-07,3;CL:0002321,7.06e-07,70;CL:0002076,7.53e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.42e-10!15;UBERON:0001242!6.58e-09!13;UBERON:0000060!6.58e-09!13;UBERON:0001262!6.58e-09!13;UBERON:0004786!6.58e-09!13;UBERON:0003350!4.46e-07!9;UBERON:0004808!4.46e-07!9;UBERON:0001277!4.46e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.41e-16,15;UBERON:0001242,1.04e-12,13;UBERON:0001262,1.04e-12,13;UBERON:0004786,1.04e-12,13;UBERON:0003350,2.97e-12,9;UBERON:0004808,2.97e-12,9;UBERON:0001277,2.97e-12,9;UBERON:0000485,8.57e-10,11;UBERON:0004923,4.71e-09,24;UBERON:0000160,1.27e-07,31|phase1_expression=0.320297694209588,2.44282785347553,0.909998478779072,3.0246421130683,3.50627010962443,2.18243053485457,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,2.21112554392781,0.198581902401771,1.30599894569468,1.75991665072747,1.37645568640302,1.72269589234506,1.7230479846363,1.72376986148711,1.52018735565099,1.00812051903972,0.886922042621219,2.54012269383853,0.61506478758457,0,2.3108129580102,2.65975432573588,3.47087905646027,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,1.26766280701236,0,0,0.899899717281399,0.988866362566974,0,1.19840044207362,1.92109152660777,1.65903379693564,3.37514845829227,0.210324961351382,0.856952953211411,0.220868540951614,1.46988959057945,2.97120960156533,0.919218786610021,0,0.255374676170375,0.153606533256243,1.45074916503213,2.19570344645783,0,1.11673199600552,0,0.763991238884051,1.17851434189467,0.427115042397309,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0.896053774194671,0.421333260395256,0,0.259786004602869,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,0,0.5709193985953,0,0.742210695324124,0.520455980298408,0.304465478312141,0,0.150722640552623,0.23517741427141,0.502666365318702,0,0.578397427679647,0,0,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0,0.239630249011841,0,0.508280908292259,0,0,1.00523481690292,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0,0,0.204109497453984,0.12811372028485,0.749613796477831,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.584799949701329,0,0.134206418760372,0.210289948564127,0.308713837137853,0.991256348951394,1.05780226665418,0,0,0.257734922644187,0.403367049246685,0,0.380451252225118,0.949058123089023,0.658795818896044,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0.538192240565737,0,0,0,0,0.169745085775188,0.469380496577004,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0.780877488593277,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0.847328283455281,0.441056796109924,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.328281799490123,1.1659233465194,0.18542530201051,0.170870880797853,0,0.370389054739423,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.259229946583586,0,9.01908701894705,1.19613236835183,0.992750942742586,0.388902376688095,1.42075805825504,0.506868376472335,0.58678619322877,1.0416350787516,0.943734099831398,2.17425708743405,4.32045009386798,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.194915761479505,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078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| ||
|EntrezGene=73139 | |||
|HGNC= | |||
|UniProt=Q9CXS4 | |||
|association_with_transcript=0bp_to_ENSMUST00000018653,NM_028448,uc007jjf.2_5end | |||
|description=CAGE_peak_5_at_Cenpv_5end | |||
|id=chr11:62352759..62352766,- | |||
|ontology_enrichment_celltype=CL:0002563!4.46e-07!9;CL:0002251!4.46e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.97e-12,9;CL:0002251,2.97e-12,9;CL:0002250,7.44e-08,3;CL:0000473,2.29e-07,7;CL:0000117,2.33e-07,23;CL:0000337,2.33e-07,23;CL:0000066,2.76e-07,25;CL:0000682,5.08e-07,3;CL:0002321,7.06e-07,70;CL:0002076,7.53e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.42e-10!15;UBERON:0001242!6.58e-09!13;UBERON:0000060!6.58e-09!13;UBERON:0001262!6.58e-09!13;UBERON:0004786!6.58e-09!13;UBERON:0003350!4.46e-07!9;UBERON:0004808!4.46e-07!9;UBERON:0001277!4.46e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.41e-16,15;UBERON:0001242,1.04e-12,13;UBERON:0001262,1.04e-12,13;UBERON:0004786,1.04e-12,13;UBERON:0003350,2.97e-12,9;UBERON:0004808,2.97e-12,9;UBERON:0001277,2.97e-12,9;UBERON:0000485,8.57e-10,11;UBERON:0004923,4.71e-09,24;UBERON:0000160,1.27e-07,31 | |||
|phase1_expression=0.320297694209588,2.44282785347553,0.909998478779072,3.0246421130683,3.50627010962443,2.18243053485457,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,2.21112554392781,0.198581902401771,1.30599894569468,1.75991665072747,1.37645568640302,1.72269589234506,1.7230479846363,1.72376986148711,1.52018735565099,1.00812051903972,0.886922042621219,2.54012269383853,0.61506478758457,0,2.3108129580102,2.65975432573588,3.47087905646027,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,1.26766280701236,0,0,0.899899717281399,0.988866362566974,0,1.19840044207362,1.92109152660777,1.65903379693564,3.37514845829227,0.210324961351382,0.856952953211411,0.220868540951614,1.46988959057945,2.97120960156533,0.919218786610021,0,0.255374676170375,0.153606533256243,1.45074916503213,2.19570344645783,0,1.11673199600552,0,0.763991238884051,1.17851434189467,0.427115042397309,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0.896053774194671,0.421333260395256,0,0.259786004602869,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,0,0.5709193985953,0,0.742210695324124,0.520455980298408,0.304465478312141,0,0.150722640552623,0.23517741427141,0.502666365318702,0,0.578397427679647,0,0,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0,0.239630249011841,0,0.508280908292259,0,0,1.00523481690292,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0,0,0.204109497453984,0.12811372028485,0.749613796477831,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.584799949701329,0,0.134206418760372,0.210289948564127,0.308713837137853,0.991256348951394,1.05780226665418,0,0,0.257734922644187,0.403367049246685,0,0.380451252225118,0.949058123089023,0.658795818896044,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0.538192240565737,0,0,0,0,0.169745085775188,0.469380496577004,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0.780877488593277,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0.847328283455281,0.441056796109924,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.328281799490123,1.1659233465194,0.18542530201051,0.170870880797853,0,0.370389054739423,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.259229946583586,0,9.01908701894705,1.19613236835183,0.992750942742586,0.388902376688095,1.42075805825504,0.506868376472335,0.58678619322877,1.0416350787516,0.943734099831398,2.17425708743405,4.32045009386798,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.194915761479505,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0.501572104035363,0,0,0.572895513439397,1.03111909406213,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0.170733605754134,0.729320151204882,0.838452650511929,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Cenpv | |||
}} |
Revision as of 20:18, 12 September 2013
Short description: | p5@Cenpv |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cenpv_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000018653, NM_028448, uc007jjf.2_5end |
EntrezGene: | Cenpv |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.97e-12 | 9 |
epithelial cell of alimentary canal | 2.97e-12 | 9 |
intestinal crypt stem cell | 7.44e-08 | 3 |
defensive cell | 2.29e-07 | 7 |
CNS neuron (sensu Vertebrata) | 2.33e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-07 | 23 |
epithelial cell | 2.76e-07 | 25 |
M cell of gut | 5.08e-07 | 3 |
embryonic cell | 7.06e-07 | 70 |
endo-epithelial cell | 7.53e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.41e-16 | 15 |
intestinal mucosa | 1.04e-12 | 13 |
wall of intestine | 1.04e-12 | 13 |
gastrointestinal system mucosa | 1.04e-12 | 13 |
epithelium of mucosa | 2.97e-12 | 9 |
gastrointestinal system epithelium | 2.97e-12 | 9 |
intestinal epithelium | 2.97e-12 | 9 |
simple columnar epithelium | 8.57e-10 | 11 |
organ component layer | 4.71e-09 | 24 |
intestine | 1.27e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.