FFCP PHASE1:Hg19::chr3:122399581..122399599,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54625|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29232|TSSclassifier=S|UniProt=E9PGX7,Q460N5,C9J8I1,Q8N546|association_with_transcript=-72bp_to_ENST00000310290,ENST00000398162,NM_017554,uc003efq.3_5end|description=CAGE_peak_3_at_PARP14_5end|id=chr3:122399581..122399599,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.97e-10!106;DOID:0050687!5.74e-10!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.14e-10,106;DOID:0050687,6.72e-10,143|ontology_enrichment_uberon=UBERON:0000062!4.03e-07!511;UBERON:0000468!4.42e-07!659|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0.990130823680373,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0,0.313454721478088,1.71741592278634,1.36874425072884,0.87879847716362,1.14620108621927,0.821005894499457,1.41679406364623,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.880801318004542,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0,0,0.306083892370903,0.641858054152187,0,0.989553900560148,0.199463657621632,0,1.16083695451434,0.56738522469114,0,1.00499466102697,0,0.434377689410233,1.81619850790011,0,0.316462387440884,0.211255286311942,0,0,0.561643155732475,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,1.90810750907073,0.569212969109448,0,1.14681968437569,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0.639312809217652,1.0843174571537,1.00267582127178,0.144846518960824,1.5905718941022,0.486634870302636,3.11964896641424,1.99556457716308,1.58102614247627,0.785874452986276,0.728590576585084,0.370784442784429,0.324547393654683,0.696518949197069,0.26591592103773,0,0.571994910780128,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,0.275118041940067,0,0,0.71153252537342,0.66944122552934,0,0.760272105718513,0,0,0,1.07159673940896,1.57170560838319,1.12611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0.886413581652058,1.72131935057184,3.72887606973458,1.77334191099179,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0.469737994575059,0.647491777472526,0.140450806702248,0.816616685019573,0.859840221182376,0.619954687054593,0,0.741800787835671,0,0,0.673344455816265,0.500474079487857,1.38532057742091,0.877955241761676,0.612975591598039,0.600952235626387,0.113432183160021,2.15267562826634,2.34913127700424,1.48352330811693,1.50045548042201,1.95799805553034,3.09168648054755,0.558350568994769,1.18143432568886,0.779496041289589,2.01947019395292,1.19664868234989,1.77810662500693,2.4850671476163,0.302256294682921,0.339121184620975,0.386521706326594,0.818238361772504,0.860413786167011,1.70763188581434,0.530119073285941,0.580969714347592,0.829288440122964,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0.721879481669586,0.828147600278907,1.01150814046861,0.482022059766964,0.882351781859152,1.08939722046203,0.474541238222193,1.07865046528132,0.784885860501384,1.92373578473195,0,0,0.8231480226628,0,0,0,1.77236972004421,0,2.45976877086227,0.857839051492628,0.439001141634502,0,0.703702806881416,1.29623823221941,1.3032332212413,0,1.44331342025273,2.31860809950154,2.11335649624479,0.288732895522148,0,0,0,0.858486162094873,0.492434012174795,0.468008530278475,0.743155811443641,1.87467667973554,0.671928512795438,1.41775097242386,1.25381931783988,0.871901815541886,0.766765358330422,1.47798971368783,0.264145302039678,0.414656231081544,0.576479813667846,1.13618190083742,0.571481048629521,0,0,0,0.308482478109971,0.600686115687835,0,0.336393253036082,0,0.4400297149257,0.258543431515556,0,0,0.797814349754612,0,0.514414748524284,0,0,0.857867961948885,1.08524321078289,1.64648067356154,0,0.355391948742546,0,0.602878754119172,1.74306691720059,0.99972991182057,0,0,0,0.479249710983165,3.44585807502342,0,0.579125226670317,0.410952645100767,0.537182889719687,0.112085143993527,0.394061520403854,0,0.128343036279748,2.03275699377971,5.20559415430487,0,0.670065061337395,0,0.749007023947182,0,0,1.8403723757871,0.500170521059677,0.271265023699736,0.207970861530807,1.07057393278297,0.630809660135739,1.63997980989798,0.902838299183157,0,0,0,0,0.521301686808497,0.979005787313703,0.686286847621712,0.206768026122887,0,0.213455115606889,0,0,0,0.74432342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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54625 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29232 | |||
|TSSclassifier=S | |||
|UniProt=E9PGX7,Q460N5,C9J8I1,Q8N546 | |||
|association_with_transcript=-72bp_to_ENST00000310290,ENST00000398162,NM_017554,uc003efq.3_5end | |||
|description=CAGE_peak_3_at_PARP14_5end | |||
|id=chr3:122399581..122399599,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.97e-10!106;DOID:0050687!5.74e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.14e-10,106;DOID:0050687,6.72e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0000062!4.03e-07!511;UBERON:0000468!4.42e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@PARP14 | |||
}} |
Revision as of 21:10, 12 September 2013
Short description: | p3@PARP14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PARP14_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000310290, ENST00000398162, NM_017554, uc003efq.3_5end |
EntrezGene: | PARP14 |
HGNC: | 29232 |
UniProt: | E9PGX7Q460N5C9J8I1Q8N546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.14e-10 | 106 |
cell type cancer | 6.72e-10 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.