FFCP PHASE1:Mm9::chr11:87405214..87405225,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=441|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:87405214..87405225,-|id=chr11:87405214..87405225,-|ontology_enrichment_celltype=CL:0000063!6.51e-09!66;CL:0000066!5.86e-08!25;CL:0000223!2.81e-07!20|ontology_enrichment_celltype_v019_2=CL:0000223,3.70e-17,20;CL:0002563,1.58e-16,9;CL:0002251,1.58e-16,9;CL:0002076,1.63e-15,15;CL:0000066,2.74e-13,25;CL:0000239,4.19e-13,6;CL:0000677,4.19e-13,6;CL:0000584,4.19e-13,6;CL:0000075,3.45e-11,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,4.19e-13,6;DOID:0060100,2.43e-10,3;DOID:4045,2.43e-10,3|ontology_enrichment_uberon=UBERON:0000485!2.63e-07!11;UBERON:0000490!4.21e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.58e-16,9;UBERON:0004808,1.58e-16,9;UBERON:0001277,1.58e-16,9;UBERON:0000485,2.41e-13,11;UBERON:0001242,3.86e-11,13;UBERON:0001262,3.86e-11,13;UBERON:0004786,3.86e-11,13;UBERON:0000344,1.60e-09,15;UBERON:0000490,8.52e-09,66;UBERON:0003929,6.26e-07,55;UBERON:0005911,7.11e-07,69|phase1_expression=0.640595388419176,3.14077866875425,1.81999695755814,6.65421264875026,2.00358291978539,0.671517087647559,1.63528848416868,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0.638177271962691,0.684802919724823,0.611942816932982,0,0.202475267389826,0,0,0,0,0.17008658030214,0.198581902401771,0.783599367416806,0.159992422793407,0.68822784320151,0.57423196411502,0,0.861884930743556,0,0.252030129759931,0.443461021310609,1.90509202037889,1.84519436275371,0,4.04392267651784,0.498703936075477,1.83752420636132,2.51118978442145,2.3440060335714,2.61761871986899,5.88231488031014,2.73218193983378,0.971020706062307,0.377690453926732,0.709638518536602,0.367093504323363,0,0.436050312760893,0,0.194429899074283,0.279972843250725,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.151452386666368,0.529000920747499,6.95674772884027,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.91347103775248,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.301445281105245,0.23517741427141,0.251333182659351,0.741584903203122,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.83778682725382,0,0.958520996047362,0.599902730993408,1.90605340609597,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0,0.204109497453984,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.796137067273973,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,1.60819986167866,0.219550115291051,0.805238512562231,0,0.205809224758569,0.660837565967596,0,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.316182685621286,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.324270453550071,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.167506257441816,0.476087281772027,1.17080188714679,0.315270288212382,0,0.159454768657487,0.491589944147214,1.20879487306127,0,1.50791283939272,0,0,1.65562047782839,0.481651769963376,0.35163505977661,0.163934945376675,0.504941854408746,0.315508219416257,0,0.430846795465598,0.238968797952552,0.891194696329576,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0.535106452806212,0.493647061806363,1.522324745573,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0,0.361877549568935,0,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,1.39951452323658,0.414599921413271,0,0,0,0.10800534082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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=441 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:87405214..87405225,- | |||
|id=chr11:87405214..87405225,- | |||
|ontology_enrichment_celltype=CL:0000063!6.51e-09!66;CL:0000066!5.86e-08!25;CL:0000223!2.81e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.70e-17,20;CL:0002563,1.58e-16,9;CL:0002251,1.58e-16,9;CL:0002076,1.63e-15,15;CL:0000066,2.74e-13,25;CL:0000239,4.19e-13,6;CL:0000677,4.19e-13,6;CL:0000584,4.19e-13,6;CL:0000075,3.45e-11,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,4.19e-13,6;DOID:0060100,2.43e-10,3;DOID:4045,2.43e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!2.63e-07!11;UBERON:0000490!4.21e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.58e-16,9;UBERON:0004808,1.58e-16,9;UBERON:0001277,1.58e-16,9;UBERON:0000485,2.41e-13,11;UBERON:0001242,3.86e-11,13;UBERON:0001262,3.86e-11,13;UBERON:0004786,3.86e-11,13;UBERON:0000344,1.60e-09,15;UBERON:0000490,8.52e-09,66;UBERON:0003929,6.26e-07,55;UBERON:0005911,7.11e-07,69 | |||
|phase1_expression=0.640595388419176,3.14077866875425,1.81999695755814,6.65421264875026,2.00358291978539,0.671517087647559,1.63528848416868,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0.638177271962691,0.684802919724823,0.611942816932982,0,0.202475267389826,0,0,0,0,0.17008658030214,0.198581902401771,0.783599367416806,0.159992422793407,0.68822784320151,0.57423196411502,0,0.861884930743556,0,0.252030129759931,0.443461021310609,1.90509202037889,1.84519436275371,0,4.04392267651784,0.498703936075477,1.83752420636132,2.51118978442145,2.3440060335714,2.61761871986899,5.88231488031014,2.73218193983378,0.971020706062307,0.377690453926732,0.709638518536602,0.367093504323363,0,0.436050312760893,0,0.194429899074283,0.279972843250725,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.151452386666368,0.529000920747499,6.95674772884027,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.91347103775248,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.301445281105245,0.23517741427141,0.251333182659351,0.741584903203122,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.83778682725382,0,0.958520996047362,0.599902730993408,1.90605340609597,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0,0.204109497453984,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.796137067273973,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,1.60819986167866,0.219550115291051,0.805238512562231,0,0.205809224758569,0.660837565967596,0,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.316182685621286,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.324270453550071,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.167506257441816,0.476087281772027,1.17080188714679,0.315270288212382,0,0.159454768657487,0.491589944147214,1.20879487306127,0,1.50791283939272,0,0,1.65562047782839,0.481651769963376,0.35163505977661,0.163934945376675,0.504941854408746,0.315508219416257,0,0.430846795465598,0.238968797952552,0.891194696329576,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0.535106452806212,0.493647061806363,1.522324745573,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0,0.361877549568935,0,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,1.39951452323658,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0,0.247960367176008,0.523511883968059,0.259229946583586,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0.579421629724277,0,0,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0.578719832943424,0,0,0,0,0,0.463735671240843 | |||
|short_description=p@chr11:87405214..87405225,- | |||
}} |
Revision as of 21:21, 12 September 2013
Short description: | p@chr11:87405214..87405225, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:87405214..87405225, - |
Coexpression cluster: | MCL_coexpression_mm9:441 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.70e-17 | 20 |
intestinal epithelial cell | 1.58e-16 | 9 |
epithelial cell of alimentary canal | 1.58e-16 | 9 |
endo-epithelial cell | 1.63e-15 | 15 |
epithelial cell | 2.74e-13 | 25 |
brush border epithelial cell | 4.19e-13 | 6 |
gut absorptive cell | 4.19e-13 | 6 |
enterocyte | 4.19e-13 | 6 |
columnar/cuboidal epithelial cell | 3.45e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.58e-16 | 9 |
gastrointestinal system epithelium | 1.58e-16 | 9 |
intestinal epithelium | 1.58e-16 | 9 |
simple columnar epithelium | 2.41e-13 | 11 |
intestinal mucosa | 3.86e-11 | 13 |
wall of intestine | 3.86e-11 | 13 |
gastrointestinal system mucosa | 3.86e-11 | 13 |
mucosa | 1.60e-09 | 15 |
unilaminar epithelium | 8.52e-09 | 66 |
gut epithelium | 6.26e-07 | 55 |
endo-epithelium | 7.11e-07 | 69 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 4.19e-13 | 6 |
musculoskeletal system cancer | 2.43e-10 | 3 |
muscle cancer | 2.43e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.