UBERON:0005911
From FANTOM5_SSTAR
Name: | endo-epithelium | |
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Namespace: | FANTOM | |
Definition: | "Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA] | |
Xrefs: |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000483(epithelium),UBERON:0004119(endoderm-derived structure) |
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develops_from: | UBERON:0000925(endoderm) |
Children
is a: | UBERON:0000118 (lung bud),UBERON:0001281 (hepatic sinusoid),UBERON:0003258 (endoderm of foregut),UBERON:0003351 (pharyngeal epithelium),UBERON:0003922 (pancreatic epithelial bud),UBERON:0004802 (respiratory tract epithelium),UBERON:0004820 (bile duct epithelium),UBERON:0005356 (Rathke's pouch),UBERON:0005910 (transitional epithelium),UBERON:0009497 (epithelium of foregut-midgut junction) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
... further results Mouse (Mus musculus)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005911 (endo-epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data