FFCP PHASE1:Hg19::chr3:16555048..16555063,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23180|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30278|TSSclassifier=S|UniProt=F8WAR1|association_with_transcript=-19bp_to_ENST00000453536_5end|coexpression_cluster_id=C4303|description=CAGE_peak_6_at_RFTN1_5end|id=chr3:16555048..16555063,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;1.69e-11;13!CL:0000453;2.76e-08;5!CL:0002334;7.87e-08;12|ontology_enrichment_celltype_v019_2=CL:0000136,1.32e-11,15;CL:0000453,2.12e-08,5;CL:0002334,1.26e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003688;2.82e-08;6!UBERON:0002358;2.82e-08;6!UBERON:0003684;2.82e-08;6!UBERON:0001178;2.82e-08;6!UBERON:0004457;8.88e-07;9!UBERON:0000042;8.88e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.37e-08,6;UBERON:0002358,6.37e-08,6;UBERON:0003684,6.37e-08,6;UBERON:0001178,6.37e-08,6;UBERON:0004457,1.18e-07,12;UBERON:0000042,1.18e-07,12|phase1_expression=2.72517568905835,3.42560838225573,2.53717927372748,1.0007329835313,4.46961094427288,0,2.53299878168311,1.89515962028049,0.261185628199839,0.491467873003018,1.39560233594486,0.873765488520689,0.263766978228454,0.37129905888014,0.662794751455832,0,0,0,0.487932798790507,0.861847406537515,0.612002073732759,0.313454721478088,2.86235987131057,1.77936752594749,1.25542639594803,2.59805579543034,2.79142004129816,2.67616656466509,0.786728553697808,1.15148819429164,0.309632246632152,0.919421224478927,0.6024118375565,0.369754010166788,0.697204805222715,0.426507697462265,0.880801318004542,0,0.200544447470142,0.217010870715852,0.447830948479849,0.647787332037959,0.515151135268373,0.436194716338694,1.13362783106643,0,0.232429036905685,0,0,0,0.512321413058201,0,1.37898272294647,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0,0.797854630486527,0,0,1.13477044938228,0,0,0.521482918420201,0,0,0,1.89877432464531,0.211255286311942,0.425208599930087,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0,0.569212969109448,1.17447437874188,0.764546456250458,0,1.12101712596307,0.263384084775077,0.590129310341499,0,0.205601498999509,0.501559486172034,0.32592226663359,0.473447805734733,0,0.445641827540694,0.294605907474837,0,0,0.128091319725675,0.520237390239513,0.657751618414705,0.276350017785848,0.579606171470105,0.444859689486181,0.267540828089713,0,0.339928028092699,1.14966148080576,1.03088233644789,0,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,1.20964045934839,0.267440195783507,0.724122019413995,2.43806866313962,0.670700859703636,0.511450247374121,0.722878304769133,0.50133791063589,0.724232594804119,3.1811437882044,0,0.189069634328136,0.221729397462564,0.351339142772504,0.261958150995425,0,0.370784442784429,0.97364218096405,0.696518949197069,1.06366368415092,0.476981248610684,0.571994910780128,0,0.596287222100115,0,0.347140501607594,1.13061588384802,0,0.550236083880135,0,0,1.06729878806013,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.563057402416611,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,3.20246987189115,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0.756787138224657,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0.816616685019573,0.368502951935304,1.54988671763648,3.56400857184616,0.494533858557114,0,0.718618141816238,0.168336113954066,0.625592599359821,0.554128230968366,0,1.5324389789951,1.05166641234618,0.226864366320042,0.717558542755448,0,0.423863802319124,0.600182192168805,0.824420233907511,0.772921620136887,0.37223371266318,0.337552664482532,0.974370051611986,0.504867548488229,0.736399189138395,0.646584227275248,0.355009592516614,1.41052937518696,0.508681776931463,1.15956511897978,1.09098448236334,0.860413786167011,0,0,0,0,0,0.36497735907583,3.12899064659632,3.21620469096443,0,1.39310378409594,0,0.354920400119532,0,0,0.330881918197182,0,0.71181185733329,0.404493924480493,0.588664395376038,0.38474715694639,1.4763109092493,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0.882926198829301,0.368965315629341,0,0.98775256867763,0,0.201057944823262,0,0,0,0,0,0.587043471179108,0.144366447761074,1.85194205030644,0,0,0,0.492434012174795,0.468008530278475,0.891786973732369,1.87467667973554,0.335964256397719,0.283550194484773,0,0,0,2.95597942737566,0.616339038092582,1.86595303986695,0.432359860250884,1.13618190083742,0.063497894292169,0,1.17217447210047,0,0.205654985406647,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.38781514727333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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23180 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30278 | |||
|TSSclassifier=S | |||
|UniProt=F8WAR1 | |||
|association_with_transcript=-19bp_to_ENST00000453536_5end | |||
|coexpression_cluster_id=C4303 | |||
|description=CAGE_peak_6_at_RFTN1_5end | |||
|id=chr3:16555048..16555063,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.69e-11;13!CL:0000453;2.76e-08;5!CL:0002334;7.87e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.32e-11,15;CL:0000453,2.12e-08,5;CL:0002334,1.26e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.82e-08;6!UBERON:0002358;2.82e-08;6!UBERON:0003684;2.82e-08;6!UBERON:0001178;2.82e-08;6!UBERON:0004457;8.88e-07;9!UBERON:0000042;8.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.37e-08,6;UBERON:0002358,6.37e-08,6;UBERON:0003684,6.37e-08,6;UBERON:0001178,6.37e-08,6;UBERON:0004457,1.18e-07,12;UBERON:0000042,1.18e-07,12 | |||
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| |||
|short_description=p6@RFTN1 | |||
}} |
Revision as of 22:34, 12 September 2013
Short description: | p6@RFTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RFTN1_5end |
Coexpression cluster: | C4303_migratory_cord_Mast_immature_Adipocyte_mature_mycosis |
Association with transcript: | -19bp_to_ENST00000453536_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | F8WAR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.32e-11 | 15 |
Langerhans cell | 2.12e-08 | 5 |
preadipocyte | 1.26e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.37e-08 | 6 |
peritoneum | 6.37e-08 | 6 |
abdominal cavity | 6.37e-08 | 6 |
visceral peritoneum | 6.37e-08 | 6 |
cavity lining | 1.18e-07 | 12 |
serous membrane | 1.18e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.