FFCP PHASE1:Mm9::chr13:23871131..23871140,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:23871131..23871140,+|id=chr13:23871131..23871140,+|ontology_enrichment_celltype=CL:0002563!2.62e-24!9;CL:0002251!2.62e-24!9;CL:0000239!1.47e-21!6;CL:0000677!1.47e-21!6;CL:0000212!1.47e-21!6;CL:0000584!1.47e-21!6;CL:0000075!2.07e-18!7;CL:0000066!2.85e-15!25;CL:0002076!3.81e-14!15;CL:0000473!4.18e-11!3;CL:0000627!4.18e-11!3;CL:0000682!4.18e-11!3;CL:0000223!2.51e-10!20|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-17,6;CL:0000677,3.71e-17,6;CL:0000584,3.71e-17,6;CL:0000075,9.44e-15,7;CL:0002563,1.55e-11,9;CL:0002251,1.55e-11,9;CL:0002076,5.29e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.04e-32!15;UBERON:0001242!5.51e-26!13;UBERON:0000060!5.51e-26!13;UBERON:0001262!5.51e-26!13;UBERON:0004786!5.51e-26!13;UBERON:0003350!2.62e-24!9;UBERON:0004808!2.62e-24!9;UBERON:0001277!2.62e-24!9;UBERON:0000160!1.17e-21!43;UBERON:0000485!1.08e-19!11;UBERON:0004923!1.88e-19!24;UBERON:0005409!8.43e-17!59;UBERON:0001962!2.95e-08!2;UBERON:0001961!2.95e-08!2;UBERON:0001744!2.95e-08!2;UBERON:0001007!8.57e-08!128;UBERON:0001555!8.57e-08!128;UBERON:0007026!8.57e-08!128;UBERON:0004119!1.29e-07!130;UBERON:0000925!1.29e-07!130;UBERON:0006595!1.29e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.07e-28,31;UBERON:0005409,3.22e-18,47;UBERON:0000344,6.24e-15,15;UBERON:0001242,3.23e-12,13;UBERON:0001262,3.23e-12,13;UBERON:0004786,3.23e-12,13;UBERON:0003350,1.55e-11,9;UBERON:0004808,1.55e-11,9;UBERON:0001277,1.55e-11,9;UBERON:0000485,1.76e-09,11;UBERON:0004923,3.22e-09,24;UBERON:0001007,7.26e-08,116;UBERON:0001555,7.26e-08,116;UBERON:0007026,7.26e-08,116;UBERON:0004119,1.05e-07,118;UBERON:0000925,1.05e-07,118;UBERON:0006595,1.05e-07,118|phase1_expression=0,1.04692622291808,0.454999239389536,4.23449895829562,6.01074875935617,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,0.91763712426868,1.14846392823004,0.86152399231815,0.430942465371778,0,0.504060259519861,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.11560453330835,0,0,0,0,0,0,1.42358718463353,0,0,0,0,2.69645822596266,5.40345124686736,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:23871131..23871140,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:23871131..23871140,+ | |||
|id=chr13:23871131..23871140,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.62e-24!9;CL:0002251!2.62e-24!9;CL:0000239!1.47e-21!6;CL:0000677!1.47e-21!6;CL:0000212!1.47e-21!6;CL:0000584!1.47e-21!6;CL:0000075!2.07e-18!7;CL:0000066!2.85e-15!25;CL:0002076!3.81e-14!15;CL:0000473!4.18e-11!3;CL:0000627!4.18e-11!3;CL:0000682!4.18e-11!3;CL:0000223!2.51e-10!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-17,6;CL:0000677,3.71e-17,6;CL:0000584,3.71e-17,6;CL:0000075,9.44e-15,7;CL:0002563,1.55e-11,9;CL:0002251,1.55e-11,9;CL:0002076,5.29e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.04e-32!15;UBERON:0001242!5.51e-26!13;UBERON:0000060!5.51e-26!13;UBERON:0001262!5.51e-26!13;UBERON:0004786!5.51e-26!13;UBERON:0003350!2.62e-24!9;UBERON:0004808!2.62e-24!9;UBERON:0001277!2.62e-24!9;UBERON:0000160!1.17e-21!43;UBERON:0000485!1.08e-19!11;UBERON:0004923!1.88e-19!24;UBERON:0005409!8.43e-17!59;UBERON:0001962!2.95e-08!2;UBERON:0001961!2.95e-08!2;UBERON:0001744!2.95e-08!2;UBERON:0001007!8.57e-08!128;UBERON:0001555!8.57e-08!128;UBERON:0007026!8.57e-08!128;UBERON:0004119!1.29e-07!130;UBERON:0000925!1.29e-07!130;UBERON:0006595!1.29e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.07e-28,31;UBERON:0005409,3.22e-18,47;UBERON:0000344,6.24e-15,15;UBERON:0001242,3.23e-12,13;UBERON:0001262,3.23e-12,13;UBERON:0004786,3.23e-12,13;UBERON:0003350,1.55e-11,9;UBERON:0004808,1.55e-11,9;UBERON:0001277,1.55e-11,9;UBERON:0000485,1.76e-09,11;UBERON:0004923,3.22e-09,24;UBERON:0001007,7.26e-08,116;UBERON:0001555,7.26e-08,116;UBERON:0007026,7.26e-08,116;UBERON:0004119,1.05e-07,118;UBERON:0000925,1.05e-07,118;UBERON:0006595,1.05e-07,118 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,4.23449895829562,6.01074875935617,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,0.91763712426868,1.14846392823004,0.86152399231815,0.430942465371778,0,0.504060259519861,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.11560453330835,0,0,0,0,0,0,1.42358718463353,0,0,0,0,2.69645822596266,5.40345124686736,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:23871131..23871140,+ | |||
}} |
Revision as of 00:11, 13 September 2013
Short description: | p@chr13:23871131..23871140, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:23871131..23871140, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.71e-17 | 6 |
gut absorptive cell | 3.71e-17 | 6 |
enterocyte | 3.71e-17 | 6 |
columnar/cuboidal epithelial cell | 9.44e-15 | 7 |
intestinal epithelial cell | 1.55e-11 | 9 |
epithelial cell of alimentary canal | 1.55e-11 | 9 |
endo-epithelial cell | 5.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.07e-28 | 31 |
gastrointestinal system | 3.22e-18 | 47 |
mucosa | 6.24e-15 | 15 |
intestinal mucosa | 3.23e-12 | 13 |
wall of intestine | 3.23e-12 | 13 |
gastrointestinal system mucosa | 3.23e-12 | 13 |
epithelium of mucosa | 1.55e-11 | 9 |
gastrointestinal system epithelium | 1.55e-11 | 9 |
intestinal epithelium | 1.55e-11 | 9 |
simple columnar epithelium | 1.76e-09 | 11 |
organ component layer | 3.22e-09 | 24 |
digestive system | 7.26e-08 | 116 |
digestive tract | 7.26e-08 | 116 |
primitive gut | 7.26e-08 | 116 |
endoderm-derived structure | 1.05e-07 | 118 |
endoderm | 1.05e-07 | 118 |
presumptive endoderm | 1.05e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.