FFCP PHASE1:Hg19::chr3:58420983..58421027,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:58420983..58421027,+|id=chr3:58420983..58421027,+|ontology_enrichment_celltype=CL:0000055!6.38e-12!180;CL:0000057!4.53e-11!75;CL:0002615!3.81e-09!3;CL:0002579!6.81e-09!3;CL:0002605!3.68e-08!3|ontology_enrichment_celltype_v019=CL:0000346;2.38e-27;3!CL:1000428;2.38e-27;3!CL:0002559;7.50e-17;5!CL:0002615;6.13e-08;3!CL:0002579;6.13e-08;3|ontology_enrichment_celltype_v019_2=CL:0000346,1.06e-27,3;CL:1000428,1.06e-27,3;CL:0002559,4.64e-17,5;CL:0002579,7.26e-08,3;CL:0002615,8.29e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!2.43e-16!6;UBERON:0002358!2.43e-16!6;UBERON:0003684!2.43e-16!6;UBERON:0001178!2.43e-16!6;UBERON:0004457!9.80e-08!12;UBERON:0000042!9.80e-08!12|ontology_enrichment_uberon_v019=UBERON:0000412;2.38e-27;3!UBERON:0001992;2.38e-27;3!UBERON:0002073;7.50e-17;5!UBERON:0003688;3.25e-14;6!UBERON:0002358;3.25e-14;6!UBERON:0003684;3.25e-14;6!UBERON:0001178;3.25e-14;6!UBERON:0004457;8.45e-10;9!UBERON:0000042;8.45e-10;9!UBERON:0002067;8.45e-10;9!UBERON:0002097;5.73e-08;41|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.06e-27,3;UBERON:0001992,1.06e-27,3;UBERON:0002073,4.64e-17,5;UBERON:0005086,4.64e-17,5;UBERON:0003688,5.17e-14,6;UBERON:0002358,5.17e-14,6;UBERON:0003684,5.17e-14,6;UBERON:0001178,5.17e-14,6;UBERON:0004923,9.45e-11,66;UBERON:0002067,6.48e-10,9;UBERON:0004016,6.48e-10,9;UBERON:0010083,6.48e-10,9;UBERON:0002097,3.99e-08,41;UBERON:0004457,1.79e-07,12;UBERON:0000042,1.79e-07,12;UBERON:0002199,2.84e-07,46;UBERON:0002416,2.84e-07,46|phase1_expression=0,0.214100523890983,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0,0.213557388818567,1.05965950579781,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,1.01736355386293,0,0,0,0.243947412259191,0.662648841607426,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.643012593860077,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,1.92979289023174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:58420983..58421027,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:58420983..58421027,+ | |||
|id=chr3:58420983..58421027,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.38e-12!180;CL:0000057!4.53e-11!75;CL:0002615!3.81e-09!3;CL:0002579!6.81e-09!3;CL:0002605!3.68e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000346;2.38e-27;3!CL:1000428;2.38e-27;3!CL:0002559;7.50e-17;5!CL:0002615;6.13e-08;3!CL:0002579;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.06e-27,3;CL:1000428,1.06e-27,3;CL:0002559,4.64e-17,5;CL:0002579,7.26e-08,3;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.43e-16!6;UBERON:0002358!2.43e-16!6;UBERON:0003684!2.43e-16!6;UBERON:0001178!2.43e-16!6;UBERON:0004457!9.80e-08!12;UBERON:0000042!9.80e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.38e-27;3!UBERON:0001992;2.38e-27;3!UBERON:0002073;7.50e-17;5!UBERON:0003688;3.25e-14;6!UBERON:0002358;3.25e-14;6!UBERON:0003684;3.25e-14;6!UBERON:0001178;3.25e-14;6!UBERON:0004457;8.45e-10;9!UBERON:0000042;8.45e-10;9!UBERON:0002067;8.45e-10;9!UBERON:0002097;5.73e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.06e-27,3;UBERON:0001992,1.06e-27,3;UBERON:0002073,4.64e-17,5;UBERON:0005086,4.64e-17,5;UBERON:0003688,5.17e-14,6;UBERON:0002358,5.17e-14,6;UBERON:0003684,5.17e-14,6;UBERON:0001178,5.17e-14,6;UBERON:0004923,9.45e-11,66;UBERON:0002067,6.48e-10,9;UBERON:0004016,6.48e-10,9;UBERON:0010083,6.48e-10,9;UBERON:0002097,3.99e-08,41;UBERON:0004457,1.79e-07,12;UBERON:0000042,1.79e-07,12;UBERON:0002199,2.84e-07,46;UBERON:0002416,2.84e-07,46 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0,0.213557388818567,1.05965950579781,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,1.01736355386293,0,0,0,0.243947412259191,0.662648841607426,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.643012593860077,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,1.92979289023174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:58420983..58421027,+ | |||
}} |
Revision as of 01:01, 13 September 2013
Short description: | p@chr3:58420983..58421027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:58420983..58421027, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.06e-27 | 3 |
stem cell of epidermis | 1.06e-27 | 3 |
hair follicle cell | 4.64e-17 | 5 |
omentum preadipocyte | 7.26e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.06e-27 | 3 |
papillary layer of dermis | 1.06e-27 | 3 |
hair follicle | 4.64e-17 | 5 |
hair follicle placode | 4.64e-17 | 5 |
omentum | 5.17e-14 | 6 |
peritoneum | 5.17e-14 | 6 |
abdominal cavity | 5.17e-14 | 6 |
visceral peritoneum | 5.17e-14 | 6 |
organ component layer | 9.45e-11 | 66 |
dermis | 6.48e-10 | 9 |
dermatome | 6.48e-10 | 9 |
future dermis | 6.48e-10 | 9 |
skin of body | 3.99e-08 | 41 |
cavity lining | 1.79e-07 | 12 |
serous membrane | 1.79e-07 | 12 |
integument | 2.84e-07 | 46 |
integumental system | 2.84e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.