FFCP PHASE1:Hg19::chr4:110901855..110901868,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3229|TSSclassifier=S|UniProt=|association_with_transcript=22bp_to_ENST00000509996,uc010imk.2_5end|description=CAGE_peak_3_at_EGF_5end|id=chr4:110901855..110901868,+|ontology_enrichment_celltype=CL:0002594!8.73e-14!4;CL:0000055!1.35e-07!180|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!1.48e-17!14;DOID:120!2.94e-08!27;DOID:193!1.42e-07!29|ontology_enrichment_disease_v019=DOID:2394;2.23e-10;14!DOID:3193;6.42e-09;2!DOID:962;6.42e-09;2|ontology_enrichment_disease_v019_2=DOID:2394,1.90e-10,14;DOID:3193,6.42e-09,2;DOID:962,6.42e-09,2|ontology_enrichment_uberon=UBERON:0001310!8.73e-14!4;UBERON:0002118!4.71e-11!5;UBERON:0004532!4.71e-11!5;UBERON:0000992!2.26e-08!13|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,2.19093027116212,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,1.26216887122057,0,0,0,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,1.32969058292435,0,0,0,0,0,0,0,0,0,0,0,4.35766729300147,3.499054691372,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19301598258835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,1.5652351854352,0.300515217994437,1.52322084867518,1.22061219961398,0.909243296012797,0.214821114084977,0,0.796191777397232,0,0,1.01024846629776,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p3@EGF}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3229 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENST00000509996,uc010imk.2_5end | |||
|description=CAGE_peak_3_at_EGF_5end | |||
|id=chr4:110901855..110901868,+ | |||
|ontology_enrichment_celltype=CL:0002594!8.73e-14!4;CL:0000055!1.35e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.48e-17!14;DOID:120!2.94e-08!27;DOID:193!1.42e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.23e-10;14!DOID:3193;6.42e-09;2!DOID:962;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.90e-10,14;DOID:3193,6.42e-09,2;DOID:962,6.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001310!8.73e-14!4;UBERON:0002118!4.71e-11!5;UBERON:0004532!4.71e-11!5;UBERON:0000992!2.26e-08!13 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@EGF | |||
}} |
Revision as of 02:02, 13 September 2013
Short description: | p3@EGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EGF_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000509996, uc010imk.2_5end |
EntrezGene: | EGF |
HGNC: | 3229 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.90e-10 | 14 |
peripheral nerve sheath neoplasm | 6.42e-09 | 2 |
neurofibroma | 6.42e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.