FFCP PHASE1:Mm9::chr15:78707591..78707600,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=106039|HGNC=|MCL_coexpression_id=0|UniProt=Q8R0H9|association_with_transcript=-19bp_to_ENSMUST00000041587,NM_145929,uc007wrn.2,uc011zvv.1_5end|description=CAGE_peak_4_at_Gga1_5end|id=chr15:78707591..78707600,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!7.18e-09!114;UBERON:0002616!2.19e-08!49;UBERON:0000955!1.01e-07!50;UBERON:0006238!1.01e-07!50;UBERON:0001049!1.05e-07!52;UBERON:0005068!1.05e-07!52;UBERON:0006241!1.05e-07!52;UBERON:0007135!1.05e-07!52;UBERON:0004111!1.27e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.12e-07,54|phase1_expression=0.480446541314382,1.39590163055744,2.72999543633722,0.60492842261366,2.50447864973174,1.34303417529512,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0.34243593645101,0.239316476986009,0.171200729931206,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0,3.23164502574065,0.397163804803541,0.522399578277871,0.639969691173627,0.45881856213434,1.72269589234506,0.86152399231815,1.939241094173,0.190023419456374,1.00812051903972,0.443461021310609,1.27006134691926,0,0,0.577703239502549,0.332469290716985,1.22501613757421,1.25559489221072,0,0.523523743973798,0,1.36609096991689,0.971020706062307,0.755380907853464,0.405507724878058,0.734187008646726,1.56478268869608,0.872100625521786,1.5378032791413,1.55543919259427,0.55994568650145,1.43752564364972,0.335565212115473,0,0.336093799142464,0.514518872071894,0,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0.518448061542388,0.540023753326763,0.420649922702764,1.14260393761521,0.220868540951614,0.367472397644862,0.766763768145891,0.919218786610021,2.20231761998777,1.27687338085188,1.53606533256243,0.923204014111357,0.640413505216868,1.04182674111352,2.79182999001381,1.68828783009504,1.5279824777681,1.17851434189467,0.427115042397309,1.1183966749518,0.151452386666368,0.226714680320357,0.579728977403356,1.72084775396277,0.679971333707751,1.07940638327563,0,0,0.842666520790511,0.511290967734173,0.259786004602869,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.5709193985953,0,0.890652834388949,0.867426633830679,0.304465478312141,0.691846491768175,0.60289056221049,0.705532242814229,0.628332956648377,1.23597483867187,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,0.969750506270444,1.86391761218122,0.878342391034642,1.04723353406728,0.766371165625774,0.359445373517761,0.599902730993408,0.254140454146129,2.09706895166752,0,1.00523481690292,1.21677024134594,0.767146371990992,1.87009240103604,0.811206315338788,0.611036183101898,0.746441823660558,1.26361379216837,0.841767423545896,1.04096354370163,0.459804208866946,0.360124259610698,0.753524089178575,0.544291993210623,0.384341160854549,0.655912071918102,0.258703370739016,1.5089759505299,0.378212160335639,0.351902248327898,0,0.834141747676794,0,0,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.710234206755631,0.787056926989615,0.462801338662135,0,1.87791380979733,0.934122738937356,0.822799249567402,0.656669856316381,0.972825714550269,1.46199987425332,1.3173006917463,1.07365135008297,0.841159794256509,0.617427674275707,0.991256348951394,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,1.39398891278057,0.569003702859245,1.14248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.569128834118316,0.442830443938806,0.784993639206874,0.123397163921801,0.592905254174298,1.33476084572875,1.17935397067922,0.449724224769707,0.608580364165509,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,1.09824565275233,5.75072826109418,1.48856379067401,1.24815069245824,1.01031551178845,1.25578189465339,1.4473305640901,0.369506380333209,0.947457058852424,1.14075483509418,0.509235257325564,0.704070744865506,0.670025029767263,0.952174563544055,1.75620283072019,0.630540576424764,0.664394068946325,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,1.50791283939272,0,1.47529281905711,1.65562047782839,1.76605648986571,2.22702204525186,0.327869890753351,1.76729649043061,0,0,0.430846795465598,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.425820255624806,0.35613120733451,0.651547837414304,0.494910368917606,1.32745138339963,0.242780636154981,0,0.565815239267694,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,0.720244376125241,0.776152102696527,0.857348140126369,0.354680467284547,1.07021290561242,0.329098041204242,0.913394847343798,0.469343416127421,1.27099242518292,0.220528398054962,0.98931751764888,0,0.72375509913787,0.477489376012546,1.64140899745061,0.291480836629851,1.66882771809459,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,0.169978429993855,0.139951452323658,0.690999869022119,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0,0.269728692769641,0.661227645802687,0.26175594198403,0.648074866458964,0.621339313086926,23.675103424736,0.747582730219894,0.165458490457098,1.94451188344048,0.774958940866387,0.844780627453891,0.469428954583016,0.651021924219751,0.524296722128554,4.59009829569411,6.91272015018877,0.948033361884535,0.810900861160657,0.308132871494482,0,0.358053391334963,0,0.120195449519969,0.443068581523732,0.403865799792591,0.381034033274999,0.504130925684203,0.487289403698762,0.673482891482306,0.233753804363138,1.36038230169127,0,0.717710852875806,0.167884616364078,0.19318959403219,0.563047426353546,1.09890974560359,0.214368379079066,0.501572104035363,1.6942555278512,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.81256963593682,0,0.518936737920883,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.735374033800057,0.222246727801615,0.618105171716683,0.64183841918363,1.26348605881899,0.50695859978048,0.377252682772152,0.842773567228942,0.640251524048693,0.631790158511746,0.476293691283074,0.927074607558844,0.38581844092741,1.23625770240992,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.846984423737976,0.761531471025089,0.548783918618318,0.263069711437843,0.950628796921032,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.929621047115796,0.578719832943424,1.49886346762768,0.467863216890817,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264|short_description=p4@Gga1}} | ||
|EntrezGene=106039 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q8R0H9 | |||
|association_with_transcript=-19bp_to_ENSMUST00000041587,NM_145929,uc007wrn.2,uc011zvv.1_5end | |||
|description=CAGE_peak_4_at_Gga1_5end | |||
|id=chr15:78707591..78707600,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!7.18e-09!114;UBERON:0002616!2.19e-08!49;UBERON:0000955!1.01e-07!50;UBERON:0006238!1.01e-07!50;UBERON:0001049!1.05e-07!52;UBERON:0005068!1.05e-07!52;UBERON:0006241!1.05e-07!52;UBERON:0007135!1.05e-07!52;UBERON:0004111!1.27e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.12e-07,54 | |||
|phase1_expression=0.480446541314382,1.39590163055744,2.72999543633722,0.60492842261366,2.50447864973174,1.34303417529512,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0.34243593645101,0.239316476986009,0.171200729931206,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0,3.23164502574065,0.397163804803541,0.522399578277871,0.639969691173627,0.45881856213434,1.72269589234506,0.86152399231815,1.939241094173,0.190023419456374,1.00812051903972,0.443461021310609,1.27006134691926,0,0,0.577703239502549,0.332469290716985,1.22501613757421,1.25559489221072,0,0.523523743973798,0,1.36609096991689,0.971020706062307,0.755380907853464,0.405507724878058,0.734187008646726,1.56478268869608,0.872100625521786,1.5378032791413,1.55543919259427,0.55994568650145,1.43752564364972,0.335565212115473,0,0.336093799142464,0.514518872071894,0,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0.518448061542388,0.540023753326763,0.420649922702764,1.14260393761521,0.220868540951614,0.367472397644862,0.766763768145891,0.919218786610021,2.20231761998777,1.27687338085188,1.53606533256243,0.923204014111357,0.640413505216868,1.04182674111352,2.79182999001381,1.68828783009504,1.5279824777681,1.17851434189467,0.427115042397309,1.1183966749518,0.151452386666368,0.226714680320357,0.579728977403356,1.72084775396277,0.679971333707751,1.07940638327563,0,0,0.842666520790511,0.511290967734173,0.259786004602869,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.5709193985953,0,0.890652834388949,0.867426633830679,0.304465478312141,0.691846491768175,0.60289056221049,0.705532242814229,0.628332956648377,1.23597483867187,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,0.969750506270444,1.86391761218122,0.878342391034642,1.04723353406728,0.766371165625774,0.359445373517761,0.599902730993408,0.254140454146129,2.09706895166752,0,1.00523481690292,1.21677024134594,0.767146371990992,1.87009240103604,0.811206315338788,0.611036183101898,0.746441823660558,1.26361379216837,0.841767423545896,1.04096354370163,0.459804208866946,0.360124259610698,0.753524089178575,0.544291993210623,0.384341160854549,0.655912071918102,0.258703370739016,1.5089759505299,0.378212160335639,0.351902248327898,0,0.834141747676794,0,0,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.710234206755631,0.787056926989615,0.462801338662135,0,1.87791380979733,0.934122738937356,0.822799249567402,0.656669856316381,0.972825714550269,1.46199987425332,1.3173006917463,1.07365135008297,0.841159794256509,0.617427674275707,0.991256348951394,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,1.39398891278057,0.569003702859245,1.14248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.569128834118316,0.442830443938806,0.784993639206874,0.123397163921801,0.592905254174298,1.33476084572875,1.17935397067922,0.449724224769707,0.608580364165509,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,1.09824565275233,5.75072826109418,1.48856379067401,1.24815069245824,1.01031551178845,1.25578189465339,1.4473305640901,0.369506380333209,0.947457058852424,1.14075483509418,0.509235257325564,0.704070744865506,0.670025029767263,0.952174563544055,1.75620283072019,0.630540576424764,0.664394068946325,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,1.50791283939272,0,1.47529281905711,1.65562047782839,1.76605648986571,2.22702204525186,0.327869890753351,1.76729649043061,0,0,0.430846795465598,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.425820255624806,0.35613120733451,0.651547837414304,0.494910368917606,1.32745138339963,0.242780636154981,0,0.565815239267694,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,0.720244376125241,0.776152102696527,0.857348140126369,0.354680467284547,1.07021290561242,0.329098041204242,0.913394847343798,0.469343416127421,1.27099242518292,0.220528398054962,0.98931751764888,0,0.72375509913787,0.477489376012546,1.64140899745061,0.291480836629851,1.66882771809459,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,0.169978429993855,0.139951452323658,0.690999869022119,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0,0.269728692769641,0.661227645802687,0.26175594198403,0.648074866458964,0.621339313086926,23.675103424736,0.747582730219894,0.165458490457098,1.94451188344048,0.774958940866387,0.844780627453891,0.469428954583016,0.651021924219751,0.524296722128554,4.59009829569411,6.91272015018877,0.948033361884535,0.810900861160657,0.308132871494482,0,0.358053391334963,0,0.120195449519969,0.443068581523732,0.403865799792591,0.381034033274999,0.504130925684203,0.487289403698762,0.673482891482306,0.233753804363138,1.36038230169127,0,0.717710852875806,0.167884616364078,0.19318959403219,0.563047426353546,1.09890974560359,0.214368379079066,0.501572104035363,1.6942555278512,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.81256963593682,0,0.518936737920883,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.735374033800057,0.222246727801615,0.618105171716683,0.64183841918363,1.26348605881899,0.50695859978048,0.377252682772152,0.842773567228942,0.640251524048693,0.631790158511746,0.476293691283074,0.927074607558844,0.38581844092741,1.23625770240992,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.846984423737976,0.761531471025089,0.548783918618318,0.263069711437843,0.950628796921032,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.929621047115796,0.578719832943424,1.49886346762768,0.467863216890817,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264 | |||
|short_description=p4@Gga1 | |||
}} | |||
Revision as of 11:08, 13 September 2013
| Short description: | p4@Gga1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Gga1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | -19bp_to_ENSMUST00000041587, NM_145929, uc007wrn.2, uc011zvv.1_5end |
| EntrezGene: | Gga1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 3.12e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
