FFCP PHASE1:Hg19::chr4:57898595..57898604,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C948|description=CAGE_peak_at_chr4:57898595..57898604,+|id=chr4:57898595..57898604,+|ontology_enrichment_celltype=CL:0000222!8.15e-12!119;CL:0000055!1.23e-10!180;CL:0000057!8.04e-09!75;CL:0000220!4.66e-08!246;CL:0000183!6.93e-08!59;CL:0002321!9.28e-08!248;CL:0000359!1.11e-07!32;CL:0000680!1.38e-07!57;CL:0000056!1.38e-07!57;CL:0000355!1.38e-07!57;CL:0000187!6.41e-07!54;CL:0000192!8.55e-07!42;CL:0000514!8.55e-07!42|ontology_enrichment_celltype_v019=CL:0000136;2.57e-09;13!CL:0002615;4.94e-09;3!CL:0002595;9.29e-09;5!CL:0000359;2.05e-08;32!CL:0002188;4.95e-08;5!CL:0002579;7.64e-08;3!CL:0000197;2.40e-07;6!CL:0000098;2.40e-07;6!CL:0002167;2.40e-07;6!CL:0002334;3.88e-07;12|ontology_enrichment_celltype_v019_2=CL:0002615,4.84e-09,3;CL:0000057,8.17e-09,76;CL:0002595,1.20e-08,5;CL:0000359,2.19e-08,32;CL:0000136,6.09e-08,15;CL:0002579,7.68e-08,3;CL:0002188,1.08e-07,5;CL:0000197,2.36e-07,6;CL:0000098,2.36e-07,6;CL:0002167,2.36e-07,6;CL:0002334,3.79e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!5.36e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!2.34e-14!79;UBERON:0007798!2.34e-14!79;UBERON:0004872!1.90e-13!84;UBERON:0000055!4.49e-12!69;UBERON:0001981!5.52e-12!60;UBERON:0007500!5.52e-12!60;UBERON:0004537!5.52e-12!60;UBERON:0006965!5.52e-12!60;UBERON:0003914!6.76e-12!118;UBERON:0001009!8.10e-12!113;UBERON:0004535!1.08e-11!110;UBERON:0001637!2.87e-11!42;UBERON:0003509!2.87e-11!42;UBERON:0004572!2.87e-11!42;UBERON:0000477!1.99e-09!286;UBERON:0004573!1.56e-08!33;UBERON:0004571!1.56e-08!33;UBERON:0003513!1.86e-07!8|ontology_enrichment_uberon_v019=UBERON:0003688;3.62e-15;6!UBERON:0002358;3.62e-15;6!UBERON:0003684;3.62e-15;6!UBERON:0001178;3.62e-15;6!UBERON:0003513;4.91e-13;7!UBERON:0004457;5.37e-13;9!UBERON:0000042;5.37e-13;9!UBERON:0003834;9.29e-09;5!UBERON:0001533;9.29e-09;5!UBERON:0004573;1.02e-08;33!UBERON:0004571;1.02e-08;33!UBERON:0001637;4.66e-08;42!UBERON:0003509;4.66e-08;42!UBERON:0004572;4.66e-08;42!UBERON:0005406;7.60e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.57e-15,6;UBERON:0002358,3.57e-15,6;UBERON:0003684,3.57e-15,6;UBERON:0001178,3.57e-15,6;UBERON:0003513,6.06e-13,7;UBERON:0003914,1.60e-10,117;UBERON:0004573,9.12e-10,33;UBERON:0004571,9.12e-10,33;UBERON:0001637,1.33e-09,42;UBERON:0003509,1.33e-09,42;UBERON:0004572,1.33e-09,42;UBERON:0004872,1.36e-09,83;UBERON:0004457,1.46e-09,12;UBERON:0000042,1.46e-09,12;UBERON:0002049,2.78e-09,78;UBERON:0007798,2.78e-09,78;UBERON:0007500,5.99e-09,59;UBERON:0001981,5.99e-09,59;UBERON:0004537,5.99e-09,59;UBERON:0006965,5.99e-09,59;UBERON:0003834,1.20e-08,5;UBERON:0001533,1.20e-08,5;UBERON:0000055,3.03e-08,68;UBERON:0009569,3.73e-08,112;UBERON:0004535,3.89e-08,109;UBERON:0001009,9.34e-08,112;UBERON:0005406,7.73e-07,2|phase1_expression=3.27021082687002,2.78330681058278,2.39622486963151,15.0109947529696,10.7270662662549,26.1701557230111,2.53299878168311,0,0,0,2.09340350391728,0,0,0,0.331397375727916,0.672325146451775,1.80808358407193,2.19093027116212,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,1.15877215168659,0,1.45990461090791,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,1.25849830862972,0.550236083880135,0.417989933073621,0,0.35576626268671,0,1.20848795132744,0.760272105718513,0.24406205754817,0,3.24056779152704,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,3.97577561356255,0.759783069987479,0.529636723252875,1.72101972449288,0.354668382198357,0.560677600142307,1.06748995729705,4.9333509683432,0,1.21239604862719,1.63461903113459,1.05950199351452,1.15235184896,0,0,0,0,0,0,0,0,0.245668634623536,0,2.37600571456411,3.70900393917835,0,2.87447256726495,0.168336113954066,0,0,0,3.98434134538726,1.35214253015937,0.680593098960126,0.89694817844431,0.427114777637135,0,1.50045548042201,0.103052529238439,0,0.18611685633159,0.506328996723799,0.389748020644795,0.252433774244115,0.368199594569197,0.646584227275248,0.355009592516614,0,0.508681776931463,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,3.21620469096443,0,0,0,0.473227200159376,0.168584690078102,0,0.55146986366197,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,2.21446636387394,2.80483547606892,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C948 | |||
|description=CAGE_peak_at_chr4:57898595..57898604,+ | |||
|id=chr4:57898595..57898604,+ | |||
|ontology_enrichment_celltype=CL:0000222!8.15e-12!119;CL:0000055!1.23e-10!180;CL:0000057!8.04e-09!75;CL:0000220!4.66e-08!246;CL:0000183!6.93e-08!59;CL:0002321!9.28e-08!248;CL:0000359!1.11e-07!32;CL:0000680!1.38e-07!57;CL:0000056!1.38e-07!57;CL:0000355!1.38e-07!57;CL:0000187!6.41e-07!54;CL:0000192!8.55e-07!42;CL:0000514!8.55e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.57e-09;13!CL:0002615;4.94e-09;3!CL:0002595;9.29e-09;5!CL:0000359;2.05e-08;32!CL:0002188;4.95e-08;5!CL:0002579;7.64e-08;3!CL:0000197;2.40e-07;6!CL:0000098;2.40e-07;6!CL:0002167;2.40e-07;6!CL:0002334;3.88e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.84e-09,3;CL:0000057,8.17e-09,76;CL:0002595,1.20e-08,5;CL:0000359,2.19e-08,32;CL:0000136,6.09e-08,15;CL:0002579,7.68e-08,3;CL:0002188,1.08e-07,5;CL:0000197,2.36e-07,6;CL:0000098,2.36e-07,6;CL:0002167,2.36e-07,6;CL:0002334,3.79e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.36e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.34e-14!79;UBERON:0007798!2.34e-14!79;UBERON:0004872!1.90e-13!84;UBERON:0000055!4.49e-12!69;UBERON:0001981!5.52e-12!60;UBERON:0007500!5.52e-12!60;UBERON:0004537!5.52e-12!60;UBERON:0006965!5.52e-12!60;UBERON:0003914!6.76e-12!118;UBERON:0001009!8.10e-12!113;UBERON:0004535!1.08e-11!110;UBERON:0001637!2.87e-11!42;UBERON:0003509!2.87e-11!42;UBERON:0004572!2.87e-11!42;UBERON:0000477!1.99e-09!286;UBERON:0004573!1.56e-08!33;UBERON:0004571!1.56e-08!33;UBERON:0003513!1.86e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.62e-15;6!UBERON:0002358;3.62e-15;6!UBERON:0003684;3.62e-15;6!UBERON:0001178;3.62e-15;6!UBERON:0003513;4.91e-13;7!UBERON:0004457;5.37e-13;9!UBERON:0000042;5.37e-13;9!UBERON:0003834;9.29e-09;5!UBERON:0001533;9.29e-09;5!UBERON:0004573;1.02e-08;33!UBERON:0004571;1.02e-08;33!UBERON:0001637;4.66e-08;42!UBERON:0003509;4.66e-08;42!UBERON:0004572;4.66e-08;42!UBERON:0005406;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.57e-15,6;UBERON:0002358,3.57e-15,6;UBERON:0003684,3.57e-15,6;UBERON:0001178,3.57e-15,6;UBERON:0003513,6.06e-13,7;UBERON:0003914,1.60e-10,117;UBERON:0004573,9.12e-10,33;UBERON:0004571,9.12e-10,33;UBERON:0001637,1.33e-09,42;UBERON:0003509,1.33e-09,42;UBERON:0004572,1.33e-09,42;UBERON:0004872,1.36e-09,83;UBERON:0004457,1.46e-09,12;UBERON:0000042,1.46e-09,12;UBERON:0002049,2.78e-09,78;UBERON:0007798,2.78e-09,78;UBERON:0007500,5.99e-09,59;UBERON:0001981,5.99e-09,59;UBERON:0004537,5.99e-09,59;UBERON:0006965,5.99e-09,59;UBERON:0003834,1.20e-08,5;UBERON:0001533,1.20e-08,5;UBERON:0000055,3.03e-08,68;UBERON:0009569,3.73e-08,112;UBERON:0004535,3.89e-08,109;UBERON:0001009,9.34e-08,112;UBERON:0005406,7.73e-07,2 | |||
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| |||
|short_description=p@chr4:57898595..57898604,+ | |||
}} |
Revision as of 11:13, 13 September 2013
Short description: | p@chr4:57898595..57898604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:57898595..57898604, + |
Coexpression cluster: | C948_Adipocyte_Fibroblast_Preadipocyte_Ewing_normal_Smooth_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.84e-09 | 3 |
fibroblast | 8.17e-09 | 76 |
smooth muscle cell of the subclavian artery | 1.20e-08 | 5 |
vascular associated smooth muscle cell | 2.19e-08 | 32 |
fat cell | 6.09e-08 | 15 |
omentum preadipocyte | 7.68e-08 | 3 |
glomerular endothelial cell | 1.08e-07 | 5 |
receptor cell | 2.36e-07 | 6 |
sensory epithelial cell | 2.36e-07 | 6 |
olfactory epithelial cell | 2.36e-07 | 6 |
preadipocyte | 3.79e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.57e-15 | 6 |
peritoneum | 3.57e-15 | 6 |
abdominal cavity | 3.57e-15 | 6 |
visceral peritoneum | 3.57e-15 | 6 |
trunk blood vessel | 6.06e-13 | 7 |
epithelial tube | 1.60e-10 | 117 |
systemic artery | 9.12e-10 | 33 |
systemic arterial system | 9.12e-10 | 33 |
artery | 1.33e-09 | 42 |
arterial blood vessel | 1.33e-09 | 42 |
arterial system | 1.33e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 1.36e-09 | 83 |
cavity lining | 1.46e-09 | 12 |
serous membrane | 1.46e-09 | 12 |
vasculature | 2.78e-09 | 78 |
vascular system | 2.78e-09 | 78 |
epithelial tube open at both ends | 5.99e-09 | 59 |
blood vessel | 5.99e-09 | 59 |
blood vasculature | 5.99e-09 | 59 |
vascular cord | 5.99e-09 | 59 |
thoracic segment blood vessel | 1.20e-08 | 5 |
subclavian artery | 1.20e-08 | 5 |
vessel | 3.03e-08 | 68 |
subdivision of trunk | 3.73e-08 | 112 |
cardiovascular system | 3.89e-08 | 109 |
circulatory system | 9.34e-08 | 112 |
perirenal fat | 7.73e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.