FFCP PHASE1:Hg19::chr4:71063402..71063414,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26043 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-31bp_to_ENST00000506248_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_3_at_ODAM_5end | |||
|id=chr4:71063402..71063414,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.67e-23;1!UBERON:0008801;2.93e-23;1!UBERON:0008814;3.24e-12;2!UBERON:0010056;3.24e-12;2!UBERON:0006965;3.24e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.13e-23!2;UBERON:0003127!1.99e-23!2;UBERON:0000078!3.58e-22!18;UBERON:0000166!5.80e-19!21;UBERON:0001044!1.03e-17!6;UBERON:0003293!1.03e-17!6;UBERON:0003294!1.03e-17!6;UBERON:0010047!1.03e-17!6;UBERON:0000167!1.03e-17!6;UBERON:0001723!6.26e-16!3;UBERON:0001033!6.26e-16!3;UBERON:0010056!6.26e-16!3;UBERON:0000165!3.86e-14!28;UBERON:0000930!3.86e-14!28;UBERON:0001736!8.85e-13!1;UBERON:0006298!8.85e-13!1;UBERON:0001831!1.11e-12!1;UBERON:0001567!1.11e-12!1;UBERON:0008801!1.11e-12!1;UBERON:0002372!1.96e-12!1;UBERON:0001961!1.96e-12!1;UBERON:0001744!1.96e-12!1;UBERON:0001735!1.96e-12!1;UBERON:0001041!3.15e-12!98;UBERON:0001004!1.66e-11!72;UBERON:0000161!3.08e-11!35;UBERON:0003408!7.32e-11!10;UBERON:0001042!1.20e-10!10;UBERON:0009145!1.20e-10!10;UBERON:0004921!1.29e-10!129;UBERON:0004185!1.29e-10!129;UBERON:0006562!9.98e-10!11;UBERON:0000077!7.77e-09!130;UBERON:0001007!1.48e-08!155;UBERON:0001555!1.48e-08!155;UBERON:0007026!1.48e-08!155;UBERON:0007023!2.18e-08!115;UBERON:0001444!4.40e-08!48;UBERON:0004119!1.05e-07!169;UBERON:0000925!1.05e-07!169;UBERON:0006595!1.05e-07!169;UBERON:0003126!2.37e-07!7;UBERON:0001005!2.37e-07!7;UBERON:0000065!3.37e-07!53;UBERON:0000341!5.41e-07!2;UBERON:0004089!5.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.00e-45;2!UBERON:0001044;7.94e-34;6!UBERON:0003293;7.94e-34;6!UBERON:0003294;7.94e-34;6!UBERON:0010047;7.94e-34;6!UBERON:0003408;7.94e-34;6!UBERON:0000167;7.94e-34;6!UBERON:0001723;5.21e-30;3!UBERON:0001033;5.21e-30;3!UBERON:0001736;1.67e-23;1!UBERON:0001831;2.93e-23;1!UBERON:0001567;2.93e-23;1!UBERON:0000165;7.23e-20;28!UBERON:0001041;5.93e-15;14!UBERON:0003127;1.65e-12;2!UBERON:0000341;2.07e-12;2!UBERON:0004089;2.45e-12;2!UBERON:0000161;3.37e-11;19!UBERON:0000166;3.37e-11;19!UBERON:0007811;5.71e-10;52!UBERON:0000153;7.84e-10;54!UBERON:0002365;5.77e-07;31!UBERON:0002330;5.77e-07;31!UBERON:0000033;6.74e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.26e-45,2;UBERON:0001044,7.51e-34,6;UBERON:0003293,7.51e-34,6;UBERON:0003294,7.51e-34,6;UBERON:0010047,7.51e-34,6;UBERON:0000167,7.51e-34,6;UBERON:0001723,5.61e-30,3;UBERON:0001033,5.61e-30,3;UBERON:0010056,5.61e-30,3;UBERON:0000166,3.38e-25,22;UBERON:0001736,1.67e-23,1;UBERON:0006298,1.67e-23,1;UBERON:0001831,2.62e-23,1;UBERON:0001567,2.62e-23,1;UBERON:0008801,2.62e-23,1;UBERON:0003408,1.20e-20,10;UBERON:0000165,3.42e-19,29;UBERON:0000930,3.42e-19,29;UBERON:0000161,1.64e-15,36;UBERON:0000153,7.76e-13,62;UBERON:0007811,7.76e-13,62;UBERON:0003127,1.65e-12,2;UBERON:0000341,2.07e-12,2;UBERON:0004089,2.32e-12,2;UBERON:0001444,1.88e-11,49;UBERON:0001004,9.04e-11,74;UBERON:0000033,4.84e-10,56;UBERON:0001042,1.01e-09,10;UBERON:0009145,1.01e-09,10;UBERON:0007023,2.31e-09,114;UBERON:0001041,3.73e-09,87;UBERON:0006562,6.35e-09,11;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31 | |||
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|short_description=p3@ODAM | |||
}} |
Revision as of 11:26, 13 September 2013
Short description: | p3@ODAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ODAM_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -31bp_to_ENST00000506248_5end |
EntrezGene: | ODAM |
HGNC: | 26043 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.26e-45 | 2 |
saliva-secreting gland | 7.51e-34 | 6 |
gland of oral region | 7.51e-34 | 6 |
gland of foregut | 7.51e-34 | 6 |
oral gland | 7.51e-34 | 6 |
oral cavity | 7.51e-34 | 6 |
tongue | 5.61e-30 | 3 |
gustatory system | 5.61e-30 | 3 |
future tongue | 5.61e-30 | 3 |
oral opening | 3.38e-25 | 22 |
submandibular gland | 1.67e-23 | 1 |
submandibular gland primordium | 1.67e-23 | 1 |
parotid gland | 2.62e-23 | 1 |
cheek | 2.62e-23 | 1 |
parotid gland primordium | 2.62e-23 | 1 |
gland of gut | 1.20e-20 | 10 |
mouth | 3.42e-19 | 29 |
stomodeum | 3.42e-19 | 29 |
orifice | 1.64e-15 | 36 |
anterior region of body | 7.76e-13 | 62 |
craniocervical region | 7.76e-13 | 62 |
open tracheal system trachea | 1.65e-12 | 2 |
throat | 2.07e-12 | 2 |
midface | 2.32e-12 | 2 |
subdivision of head | 1.88e-11 | 49 |
respiratory system | 9.04e-11 | 74 |
head | 4.84e-10 | 56 |
chordate pharynx | 1.01e-09 | 10 |
pharyngeal region of foregut | 1.01e-09 | 10 |
adult organism | 2.31e-09 | 114 |
foregut | 3.73e-09 | 87 |
pharynx | 6.35e-09 | 11 |
exocrine gland | 4.21e-07 | 31 |
exocrine system | 4.21e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.