FFCP PHASE1:Hg19::chr4:8582132..8582151,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27201|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4528|TSSclassifier=S|UniProt=B2R7M4,Q96P69|association_with_transcript=-65bp_to_NM_080819_5end|coexpression_cluster_id=C159|description=CAGE_peak_3_at_GPR78_5end|id=chr4:8582132..8582151,+|ontology_enrichment_celltype=CL:0000039!3.33e-20!7;CL:0000586!3.33e-20!7;CL:0002322!2.16e-17!5;CL:0002541!4.84e-17!3;CL:0000540!8.36e-09!6;CL:0000031!8.36e-09!6;CL:0000404!8.36e-09!6|ontology_enrichment_celltype_v019=CL:0000039;1.59e-32;7!CL:0000586;1.59e-32;7!CL:0000083;1.54e-07;4|ontology_enrichment_celltype_v019_2=CL:0000039,1.67e-32,7;CL:0000586,1.67e-32,7;CL:0000083,1.59e-07,4|ontology_enrichment_development_v019=UBERON:0003124;4.06e-26;1|ontology_enrichment_disease=DOID:3095!1.22e-08!22;DOID:2994!1.22e-08!22;DOID:1799!3.52e-07!1;DOID:10165!3.52e-07!1;DOID:1798!3.52e-07!1|ontology_enrichment_disease_v019=DOID:1799;4.06e-26;1!DOID:10165;4.06e-26;1!DOID:1798;4.06e-26;1!DOID:3095;7.04e-11;22!DOID:2994;7.04e-11;22!DOID:1793;1.54e-07;4|ontology_enrichment_disease_v019_2=DOID:1799,4.61e-26,1;DOID:10165,4.61e-26,1;DOID:1798,4.61e-26,1;DOID:3095,7.16e-11,22;DOID:2994,7.16e-11,22;DOID:1793,1.59e-07,4|ontology_enrichment_uberon=UBERON:0000476!4.84e-17!3;UBERON:0000920!4.84e-17!3;UBERON:0003124!6.14e-13!7;UBERON:0001950!1.04e-11!20;UBERON:0001869!1.09e-11!32;UBERON:0001893!6.16e-11!34;UBERON:0002619!1.30e-10!22;UBERON:0005631!8.65e-10!14;UBERON:0000158!8.65e-10!14;UBERON:0000956!2.75e-09!25;UBERON:0000203!2.75e-09!25;UBERON:0002791!5.96e-09!33;UBERON:0002780!7.20e-09!41;UBERON:0001890!7.20e-09!41;UBERON:0006240!7.20e-09!41;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0003080!1.25e-08!42;UBERON:0002022!4.97e-07!1;UBERON:0001017!6.75e-07!82;UBERON:0001882!9.79e-07!1;UBERON:0005403!9.79e-07!1|ontology_enrichment_uberon_v019=UBERON:0001987;1.54e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.447781594,9.15527972979676,1.19512109114209,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,1.24632101408756,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64292091788694,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,8.87023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.339957450954573,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0,0.275684698604535,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@GPR78}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=27201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4528 | |||
|TSSclassifier=S | |||
|UniProt=B2R7M4,Q96P69 | |||
|association_with_transcript=-65bp_to_NM_080819_5end | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_3_at_GPR78_5end | |||
|id=chr4:8582132..8582151,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.33e-20!7;CL:0000586!3.33e-20!7;CL:0002322!2.16e-17!5;CL:0002541!4.84e-17!3;CL:0000540!8.36e-09!6;CL:0000031!8.36e-09!6;CL:0000404!8.36e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.59e-32;7!CL:0000586;1.59e-32;7!CL:0000083;1.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.67e-32,7;CL:0000586,1.67e-32,7;CL:0000083,1.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.06e-26;1 | |||
|ontology_enrichment_disease=DOID:3095!1.22e-08!22;DOID:2994!1.22e-08!22;DOID:1799!3.52e-07!1;DOID:10165!3.52e-07!1;DOID:1798!3.52e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;4.06e-26;1!DOID:10165;4.06e-26;1!DOID:1798;4.06e-26;1!DOID:3095;7.04e-11;22!DOID:2994;7.04e-11;22!DOID:1793;1.54e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.61e-26,1;DOID:10165,4.61e-26,1;DOID:1798,4.61e-26,1;DOID:3095,7.16e-11,22;DOID:2994,7.16e-11,22;DOID:1793,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.84e-17!3;UBERON:0000920!4.84e-17!3;UBERON:0003124!6.14e-13!7;UBERON:0001950!1.04e-11!20;UBERON:0001869!1.09e-11!32;UBERON:0001893!6.16e-11!34;UBERON:0002619!1.30e-10!22;UBERON:0005631!8.65e-10!14;UBERON:0000158!8.65e-10!14;UBERON:0000956!2.75e-09!25;UBERON:0000203!2.75e-09!25;UBERON:0002791!5.96e-09!33;UBERON:0002780!7.20e-09!41;UBERON:0001890!7.20e-09!41;UBERON:0006240!7.20e-09!41;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0003080!1.25e-08!42;UBERON:0002022!4.97e-07!1;UBERON:0001017!6.75e-07!82;UBERON:0001882!9.79e-07!1;UBERON:0005403!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.447781594,9.15527972979676,1.19512109114209,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,1.24632101408756,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64292091788694,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,8.87023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.339957450954573,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0,0.275684698604535,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GPR78 | |||
}} |
Revision as of 12:07, 13 September 2013
Short description: | p3@GPR78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GPR78_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -65bp_to_NM_080819_5end |
EntrezGene: | GPR78 |
HGNC: | 4528 |
UniProt: | B2R7M4Q96P69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.67e-32 | 7 |
germ cell | 1.67e-32 | 7 |
epithelial cell of pancreas | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.61e-26 | 1 |
endocrine pancreas cancer | 4.61e-26 | 1 |
pancreatic endocrine carcinoma | 4.61e-26 | 1 |
germ cell and embryonal cancer | 7.16e-11 | 22 |
germ cell cancer | 7.16e-11 | 22 |
pancreatic cancer | 1.59e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.