Personal tools

FFCP PHASE1:Mm9::chr17:56144981..56144988,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=106766|HGNC=|MCL_coexpression_id=58|UniProt=Q8R0L1|association_with_transcript=2bp_to_NM_145934,uc008dao.1_5end|description=CAGE_peak_2_at_Stap2_5end|id=chr17:56144981..56144988,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-08,25;CL:0000223,1.88e-07,20;CL:0000239,2.76e-07,6;CL:0000677,2.76e-07,6;CL:0000584,2.76e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.23e-19!130;UBERON:0000925!8.23e-19!130;UBERON:0006595!8.23e-19!130;UBERON:0001007!2.47e-18!128;UBERON:0001555!2.47e-18!128;UBERON:0007026!2.47e-18!128;UBERON:0004921!4.27e-17!126;UBERON:0004185!4.27e-17!126;UBERON:0005409!1.41e-15!59;UBERON:0000160!5.28e-15!43;UBERON:0000344!5.45e-09!15;UBERON:0000481!1.45e-08!230;UBERON:0001242!1.17e-07!13;UBERON:0000060!1.17e-07!13;UBERON:0001262!1.17e-07!13;UBERON:0004786!1.17e-07!13;UBERON:0004923!1.69e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.82e-17,31;UBERON:0004119,3.33e-16,118;UBERON:0000925,3.33e-16,118;UBERON:0006595,3.33e-16,118;UBERON:0001007,3.36e-16,116;UBERON:0001555,3.36e-16,116;UBERON:0007026,3.36e-16,116;UBERON:0005409,8.82e-16,47;UBERON:0004921,9.31e-15,114;UBERON:0000344,1.03e-10,15;UBERON:0001242,7.85e-09,13;UBERON:0001262,7.85e-09,13;UBERON:0004786,7.85e-09,13;UBERON:0007023,2.85e-08,51;UBERON:0004923,2.70e-07,24|phase1_expression=0.160148847104794,36.2934423944936,32.7599452360466,11.1911758183527,14.5259761684441,17.7952028226603,14.9512089981136,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.765389611359628,0.0992909512008853,0.261199789138935,19.9990528491758,28.2173415712619,29.285830169866,37.0455316696804,39.8621780468895,13.8717096203153,11.3413558391969,26.3859307679813,0,0,0,1.44425809875637,0.664938581433969,0.612508068787107,0,0,0,0,0,0.485510353031154,1.00717454380462,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0.515672092277442,0,1.05798195854407,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.207379224616955,0.405017814995072,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0.52091337055676,0.558365998002762,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,2.6087803983151,1.72084775396277,4.0798280022465,2.69851595818909,3.24888208723835,3.13618820968135,2.66844398250329,0,0,0,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,1.51657333504435,2.51204535381932,1.03575153458869,0.29688427812965,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,2.22475470960936,1.01219549843938,1.76922110389975,0.323533699894818,0.441683036920787,0,0,2.04946557908083,2.09446706813455,9.19645398750929,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0,1.32391173005411,0.870848794270651,4.80173241023982,1.47309299120532,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.0937017245597288,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,1.4404749548556,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0.23674473558521,0,0.617068451549513,1.39520366850245,0.804820204198858,0.934122738937356,1.31647879930784,2.29834449710733,1.70244500046297,1.31579988682799,2.19550115291051,1.74468344388483,0,0.102904612379284,14.8688452342709,4.23120906661671,0.213288250535234,0.464473343720877,1.28867461322093,3.42861991859682,1.77902435075896,2.47293313946327,8.54152310780121,4.6115707322723,3.51869292320377,5.37182474511107,3.50935356814416,8.08937467788799,6.26800344636613,8.16479220342906,0.189667900953082,0.456994050438915,0,0.407302655690628,0.387904974335251,0.561086559122548,1.39120381673366,1.18088118383682,1.72698600625512,0.616985819609003,2.07516838961004,0,0,0,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.972811360650212,1.09824565275233,0,1.48856379067401,4.05648975048929,1.76805214562978,3.04975602987251,1.92977408545347,0.554259570499814,0.189491411770485,0.488894929326078,0.509235257325564,0.704070744865506,1.67506257441816,3.57065461329021,1.75620283072019,1.7339865851681,1.55025282754142,1.59454768657487,0.81931657357869,2.41758974612254,2.74833211304872,0,0,6.88469982226651,7.45029215022778,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,1.56134093729095,0.534196811001766,0.488660878060728,1.31976098378028,1.32745138339963,0.728341908464944,0.604647113929502,0.377210159511796,2.36241514304618,1.53717573971964,1.80899805217755,1.81766864738753,1.06949213515416,0.632073515871632,2.10837217149998,3.09406629744561,0,0.36012218806262,0.129358683782755,0,1.24138163549592,0.891844088010353,0.822745103010605,0,0.938686832254841,1.27099242518292,1.98475558249466,1.15420377059036,0.645857706783622,0.482503399425247,0.596861720015682,0.492422699235184,5.24665505933731,0,0.170870880797853,0.619160603889667,1.29636169158798,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,2.86401185404534,0,0.203319467126849,0.972048067396211,2.71814784818809,3.05707589244649,2.29269388854195,2.39695021603474,3.66458318777641,3.11075935900303,7.45607175704311,0,0.149516546043979,0.165458490457098,0.583353565032143,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0.948033361884535,0.608175645870493,1.23253148597793,0.77952493786677,0.358053391334963,0.39736270956253,0.721172697119813,0.590758108698309,0.504832249740738,0.228620419965,0.705783295957884,0.292373642219257,0.0962118416403295,0.350630706544707,4.98806843953465,1.33191572024439,0.0897138566094757,0.503653849092235,0.386379188064381,2.064507229963,5.67770035228522,8.7891035422417,4.01257683228291,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,1.11123363900808,0.824140228955577,0.320919209591815,1.01078884705519,0.25347929989024,0.565879024158229,0.842773567228942,0.640251524048693,0.804096565378586,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0,0.342869252385415,0.177475806159338,0.715308569841963,1.0174249164263,0.564656282491984,0.930760686808441,0.182927972872773,0.263069711437843,0.814824683075171,1.12228454331548,0.949080144993393,0.591026894253381,0.818462086339379,0.464810523557898,1.35034627686799,0.749431733813838,0.233931608445408,0.859484216193193,0.57386499620653,1.10295709559758,0.927471342481686|short_description=p2@Stap2}}
|EntrezGene=106766
|HGNC=
|MCL_coexpression_id=58
|UniProt=Q8R0L1
|association_with_transcript=2bp_to_NM_145934,uc008dao.1_5end
|description=CAGE_peak_2_at_Stap2_5end
|id=chr17:56144981..56144988,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-08,25;CL:0000223,1.88e-07,20;CL:0000239,2.76e-07,6;CL:0000677,2.76e-07,6;CL:0000584,2.76e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.23e-19!130;UBERON:0000925!8.23e-19!130;UBERON:0006595!8.23e-19!130;UBERON:0001007!2.47e-18!128;UBERON:0001555!2.47e-18!128;UBERON:0007026!2.47e-18!128;UBERON:0004921!4.27e-17!126;UBERON:0004185!4.27e-17!126;UBERON:0005409!1.41e-15!59;UBERON:0000160!5.28e-15!43;UBERON:0000344!5.45e-09!15;UBERON:0000481!1.45e-08!230;UBERON:0001242!1.17e-07!13;UBERON:0000060!1.17e-07!13;UBERON:0001262!1.17e-07!13;UBERON:0004786!1.17e-07!13;UBERON:0004923!1.69e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.82e-17,31;UBERON:0004119,3.33e-16,118;UBERON:0000925,3.33e-16,118;UBERON:0006595,3.33e-16,118;UBERON:0001007,3.36e-16,116;UBERON:0001555,3.36e-16,116;UBERON:0007026,3.36e-16,116;UBERON:0005409,8.82e-16,47;UBERON:0004921,9.31e-15,114;UBERON:0000344,1.03e-10,15;UBERON:0001242,7.85e-09,13;UBERON:0001262,7.85e-09,13;UBERON:0004786,7.85e-09,13;UBERON:0007023,2.85e-08,51;UBERON:0004923,2.70e-07,24
|phase1_expression=0.160148847104794,36.2934423944936,32.7599452360466,11.1911758183527,14.5259761684441,17.7952028226603,14.9512089981136,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.765389611359628,0.0992909512008853,0.261199789138935,19.9990528491758,28.2173415712619,29.285830169866,37.0455316696804,39.8621780468895,13.8717096203153,11.3413558391969,26.3859307679813,0,0,0,1.44425809875637,0.664938581433969,0.612508068787107,0,0,0,0,0,0.485510353031154,1.00717454380462,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0.515672092277442,0,1.05798195854407,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.207379224616955,0.405017814995072,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0.52091337055676,0.558365998002762,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,2.6087803983151,1.72084775396277,4.0798280022465,2.69851595818909,3.24888208723835,3.13618820968135,2.66844398250329,0,0,0,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,1.51657333504435,2.51204535381932,1.03575153458869,0.29688427812965,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,2.22475470960936,1.01219549843938,1.76922110389975,0.323533699894818,0.441683036920787,0,0,2.04946557908083,2.09446706813455,9.19645398750929,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0,1.32391173005411,0.870848794270651,4.80173241023982,1.47309299120532,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.0937017245597288,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,1.4404749548556,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0.23674473558521,0,0.617068451549513,1.39520366850245,0.804820204198858,0.934122738937356,1.31647879930784,2.29834449710733,1.70244500046297,1.31579988682799,2.19550115291051,1.74468344388483,0,0.102904612379284,14.8688452342709,4.23120906661671,0.213288250535234,0.464473343720877,1.28867461322093,3.42861991859682,1.77902435075896,2.47293313946327,8.54152310780121,4.6115707322723,3.51869292320377,5.37182474511107,3.50935356814416,8.08937467788799,6.26800344636613,8.16479220342906,0.189667900953082,0.456994050438915,0,0.407302655690628,0.387904974335251,0.561086559122548,1.39120381673366,1.18088118383682,1.72698600625512,0.616985819609003,2.07516838961004,0,0,0,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.972811360650212,1.09824565275233,0,1.48856379067401,4.05648975048929,1.76805214562978,3.04975602987251,1.92977408545347,0.554259570499814,0.189491411770485,0.488894929326078,0.509235257325564,0.704070744865506,1.67506257441816,3.57065461329021,1.75620283072019,1.7339865851681,1.55025282754142,1.59454768657487,0.81931657357869,2.41758974612254,2.74833211304872,0,0,6.88469982226651,7.45029215022778,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,1.56134093729095,0.534196811001766,0.488660878060728,1.31976098378028,1.32745138339963,0.728341908464944,0.604647113929502,0.377210159511796,2.36241514304618,1.53717573971964,1.80899805217755,1.81766864738753,1.06949213515416,0.632073515871632,2.10837217149998,3.09406629744561,0,0.36012218806262,0.129358683782755,0,1.24138163549592,0.891844088010353,0.822745103010605,0,0.938686832254841,1.27099242518292,1.98475558249466,1.15420377059036,0.645857706783622,0.482503399425247,0.596861720015682,0.492422699235184,5.24665505933731,0,0.170870880797853,0.619160603889667,1.29636169158798,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,2.86401185404534,0,0.203319467126849,0.972048067396211,2.71814784818809,3.05707589244649,2.29269388854195,2.39695021603474,3.66458318777641,3.11075935900303,7.45607175704311,0,0.149516546043979,0.165458490457098,0.583353565032143,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0.948033361884535,0.608175645870493,1.23253148597793,0.77952493786677,0.358053391334963,0.39736270956253,0.721172697119813,0.590758108698309,0.504832249740738,0.228620419965,0.705783295957884,0.292373642219257,0.0962118416403295,0.350630706544707,4.98806843953465,1.33191572024439,0.0897138566094757,0.503653849092235,0.386379188064381,2.064507229963,5.67770035228522,8.7891035422417,4.01257683228291,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,1.11123363900808,0.824140228955577,0.320919209591815,1.01078884705519,0.25347929989024,0.565879024158229,0.842773567228942,0.640251524048693,0.804096565378586,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0,0.342869252385415,0.177475806159338,0.715308569841963,1.0174249164263,0.564656282491984,0.930760686808441,0.182927972872773,0.263069711437843,0.814824683075171,1.12228454331548,0.949080144993393,0.591026894253381,0.818462086339379,0.464810523557898,1.35034627686799,0.749431733813838,0.233931608445408,0.859484216193193,0.57386499620653,1.10295709559758,0.927471342481686
|short_description=p2@Stap2
}}

Revision as of 14:57, 13 September 2013

Short description:p2@Stap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Stap2_5end
Coexpression cluster:MCL_coexpression_mm9:58
Association with transcript: 2bp_to_NM_145934, uc008dao.1_5end
EntrezGene:Stap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Stap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I632.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.95
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D228.22
GP2+ M cell, pool1.CNhs13228.11845-124H929.29
GP2+ M cell, pool2.CNhs13231.11846-124I137.05
GP2+ M cell, pool3.CNhs13240.11847-124I239.86
Ileum epithelium, pool1.CNhs13199.10252-104B913.87
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.03e-0825
endodermal cell1.88e-0720
brush border epithelial cell2.76e-076
gut absorptive cell2.76e-076
enterocyte2.76e-076

Uber anatomy
Ontology termp-valuen
intestine8.82e-1731
endoderm-derived structure3.33e-16118
endoderm3.33e-16118
presumptive endoderm3.33e-16118
digestive system3.36e-16116
digestive tract3.36e-16116
primitive gut3.36e-16116
gastrointestinal system8.82e-1647
subdivision of digestive tract9.31e-15114
mucosa1.03e-1015
intestinal mucosa7.85e-0913
wall of intestine7.85e-0913
gastrointestinal system mucosa7.85e-0913
adult organism2.85e-0851
organ component layer2.70e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:56144981..56144988,-&oldid=2946070"