FFCP PHASE1:Mm9::chr17:74299477..74299492,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22436|HGNC=|MCL_coexpression_id=1984|UniProt=Q3TP30|association_with_transcript=0bp_to_ENSMUST00000097283_5end|description=CAGE_peak_1_at_Xdh_5end|id=chr17:74299477..74299492,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.09e-10!51;UBERON:0004119!4.20e-09!130;UBERON:0000925!4.20e-09!130;UBERON:0006595!4.20e-09!130;UBERON:0001007!1.57e-08!128;UBERON:0001555!1.57e-08!128;UBERON:0007026!1.57e-08!128;UBERON:0005256!1.99e-08!47;UBERON:0004923!6.55e-08!24;UBERON:0004921!8.59e-08!126;UBERON:0004185!8.59e-08!126;UBERON:0000344!1.71e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.89e-10,118;UBERON:0000925,1.89e-10,118;UBERON:0006595,1.89e-10,118;UBERON:0007023,5.42e-10,51;UBERON:0001007,7.96e-10,116;UBERON:0001555,7.96e-10,116;UBERON:0007026,7.96e-10,116;UBERON:0005256,1.80e-09,45;UBERON:0004921,5.16e-09,114;UBERON:0000160,6.44e-09,31;UBERON:0005409,1.51e-08,47;UBERON:0004923,5.33e-08,24;UBERON:0000344,1.41e-07,15|phase1_expression=0.320297694209588,928.2745843207,719.353797474856,1028.37831844322,1023.83087201033,48.684988854448,60.2720612736456,10.5881125222093,7.180224829735,7.95819389494778,1.88339765048055,0.558405112967355,4.10881751834894,2.27293046289393,4.99664642723494,3.23960427823721,3.49780939064073,5.67831897644828,7.95263714913285,5.09267582157636,62.5068182610363,2.18440092641948,2.61199789138935,283.506573189917,210.597720019662,428.377045229805,274.395391553331,254.256054569349,178.431990869535,339.232554656867,81.3750974104968,0.635030673459631,0,0,8.66554859253824,19.6156881523021,10.0042984568561,540.324335281348,310.971467120473,445.518706121702,517.643709467293,487.69447626033,452.981159378066,139.871364770866,145.780027093662,209.243297464317,13.3006528539167,0.436050312760893,0.439372365468944,0.777719596297134,10.0790223570261,0,0.335565212115473,6.5282592781021,11.7632829699862,35.5018021729607,110.888441256299,67.0373719960675,0,0,0,0,1.77858959222228,31.496490104849,40.543520865246,25.5772841380596,2.39680088414724,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,3.30347642998166,4.21368215681119,4.45458946443106,0,0,0,4.4669279840221,3.93933827022176,5.80633341551878,0,0,0,4.31639301999149,6.65029728939713,159.715333274624,103.250865237766,102.67567138987,42.6365521393876,102.014897539284,73.9244363710604,61.0933227573121,33.2339129027213,31.9536785661529,25.4404493647445,0.563373679106722,23.0987659345772,15.2883143823987,0,7.36069539438128,4.56047757855178,7.07734223020697,131.996564955233,44.7962538709607,54.7751493149203,10.4091196059682,66.3734742720468,91.5543524106552,81.9931164606267,74.1984742026297,88.9719466614102,43.5063143212498,112.064501612932,54.8458542208922,5.50007289821191,16.5631138845295,12.6067565815158,20.5030937339934,6.14839673724249,3.35114730901528,590.105797531846,7.54835284387298,10.1983464268879,17.662761563156,7.9389038884556,16.9275223042892,0,6.43149984711423,2.30143911597297,3.94797284663164,2.75810147215188,6.31404055871961,32.4702193292343,12.8888606801174,13.6787206326208,0,0,0.180062129805349,0.452114453507145,2.51735046859913,0.384341160854549,1.03071897015702,10.0894314588216,0,0,0,0.657587197282725,0.278047249225598,2.43776516565517,3.70407845534298,0.199034266818493,33.004019803722,36.2860549031748,38.9303994171962,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.617068451549513,0.697601834251224,2.14618721119695,11.2094728672483,1.81015834904829,2.13417703302824,17.1055188141756,24.8539978623065,27.8828646419634,72.0688468743196,3.78521907415429,0.205809224758569,3186.88916187873,528.901133327089,0,0,0.38660238396628,1.61346819698674,8.00560957841533,24.5391057685201,447.955434098019,82.0200794525574,101.790759564109,108.232320790386,127.896441150143,511.428243524252,397.694011769437,489.090967112726,0.379335801906163,2.85621281524322,1.1270773567308,0.203651327845314,0.581857461502877,1.61312385747733,1.39120381673366,8.85660887877613,8.94892748695836,17.2756029490521,201.884239046348,0.166845105716094,0.393117990226406,0.224862112384854,2.63718157805054,3.61765739628625,5.60176873919124,13.8094145976389,17.1863340381537,9.33508804839477,12.9391385874619,19.3513292787622,23.0907878104775,79.057188797446,100.821346399315,117.233775691298,275.097500158074,0,0.162964976442026,0.678980343100753,3.98973422090454,17.9231695462743,60.9391720668195,111.226179278945,15.7635144106191,12.6234873099802,14.8292934851463,130.107471884296,66.138348054638,190.792108269014,123.648852830203,106.605514028467,1990.66177718106,1517.65210467603,6.42202359951168,2.93029216480508,48.1968739407426,34.8409879542035,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,5.14114106274891,29.0977174676951,1.6025904330053,4.39794790254655,41.2425307431339,14.6019652173959,0,0.302323556964751,0.188605079755898,2.06711325016541,0.922305443831782,38.2473873888967,2.1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| ||
|EntrezGene=22436 | |||
|HGNC= | |||
|MCL_coexpression_id=1984 | |||
|UniProt=Q3TP30 | |||
|association_with_transcript=0bp_to_ENSMUST00000097283_5end | |||
|description=CAGE_peak_1_at_Xdh_5end | |||
|id=chr17:74299477..74299492,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.09e-10!51;UBERON:0004119!4.20e-09!130;UBERON:0000925!4.20e-09!130;UBERON:0006595!4.20e-09!130;UBERON:0001007!1.57e-08!128;UBERON:0001555!1.57e-08!128;UBERON:0007026!1.57e-08!128;UBERON:0005256!1.99e-08!47;UBERON:0004923!6.55e-08!24;UBERON:0004921!8.59e-08!126;UBERON:0004185!8.59e-08!126;UBERON:0000344!1.71e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.89e-10,118;UBERON:0000925,1.89e-10,118;UBERON:0006595,1.89e-10,118;UBERON:0007023,5.42e-10,51;UBERON:0001007,7.96e-10,116;UBERON:0001555,7.96e-10,116;UBERON:0007026,7.96e-10,116;UBERON:0005256,1.80e-09,45;UBERON:0004921,5.16e-09,114;UBERON:0000160,6.44e-09,31;UBERON:0005409,1.51e-08,47;UBERON:0004923,5.33e-08,24;UBERON:0000344,1.41e-07,15 | |||
|phase1_expression=0.320297694209588,928.2745843207,719.353797474856,1028.37831844322,1023.83087201033,48.684988854448,60.2720612736456,10.5881125222093,7.180224829735,7.95819389494778,1.88339765048055,0.558405112967355,4.10881751834894,2.27293046289393,4.99664642723494,3.23960427823721,3.49780939064073,5.67831897644828,7.95263714913285,5.09267582157636,62.5068182610363,2.18440092641948,2.61199789138935,283.506573189917,210.597720019662,428.377045229805,274.395391553331,254.256054569349,178.431990869535,339.232554656867,81.3750974104968,0.635030673459631,0,0,8.66554859253824,19.6156881523021,10.0042984568561,540.324335281348,310.971467120473,445.518706121702,517.643709467293,487.69447626033,452.981159378066,139.871364770866,145.780027093662,209.243297464317,13.3006528539167,0.436050312760893,0.439372365468944,0.777719596297134,10.0790223570261,0,0.335565212115473,6.5282592781021,11.7632829699862,35.5018021729607,110.888441256299,67.0373719960675,0,0,0,0,1.77858959222228,31.496490104849,40.543520865246,25.5772841380596,2.39680088414724,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,3.30347642998166,4.21368215681119,4.45458946443106,0,0,0,4.4669279840221,3.93933827022176,5.80633341551878,0,0,0,4.31639301999149,6.65029728939713,159.715333274624,103.250865237766,102.67567138987,42.6365521393876,102.014897539284,73.9244363710604,61.0933227573121,33.2339129027213,31.9536785661529,25.4404493647445,0.563373679106722,23.0987659345772,15.2883143823987,0,7.36069539438128,4.56047757855178,7.07734223020697,131.996564955233,44.7962538709607,54.7751493149203,10.4091196059682,66.3734742720468,91.5543524106552,81.9931164606267,74.1984742026297,88.9719466614102,43.5063143212498,112.064501612932,54.8458542208922,5.50007289821191,16.5631138845295,12.6067565815158,20.5030937339934,6.14839673724249,3.35114730901528,590.105797531846,7.54835284387298,10.1983464268879,17.662761563156,7.9389038884556,16.9275223042892,0,6.43149984711423,2.30143911597297,3.94797284663164,2.75810147215188,6.31404055871961,32.4702193292343,12.8888606801174,13.6787206326208,0,0,0.180062129805349,0.452114453507145,2.51735046859913,0.384341160854549,1.03071897015702,10.0894314588216,0,0,0,0.657587197282725,0.278047249225598,2.43776516565517,3.70407845534298,0.199034266818493,33.004019803722,36.2860549031748,38.9303994171962,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.617068451549513,0.697601834251224,2.14618721119695,11.2094728672483,1.81015834904829,2.13417703302824,17.1055188141756,24.8539978623065,27.8828646419634,72.0688468743196,3.78521907415429,0.205809224758569,3186.88916187873,528.901133327089,0,0,0.38660238396628,1.61346819698674,8.00560957841533,24.5391057685201,447.955434098019,82.0200794525574,101.790759564109,108.232320790386,127.896441150143,511.428243524252,397.694011769437,489.090967112726,0.379335801906163,2.85621281524322,1.1270773567308,0.203651327845314,0.581857461502877,1.61312385747733,1.39120381673366,8.85660887877613,8.94892748695836,17.2756029490521,201.884239046348,0.166845105716094,0.393117990226406,0.224862112384854,2.63718157805054,3.61765739628625,5.60176873919124,13.8094145976389,17.1863340381537,9.33508804839477,12.9391385874619,19.3513292787622,23.0907878104775,79.057188797446,100.821346399315,117.233775691298,275.097500158074,0,0.162964976442026,0.678980343100753,3.98973422090454,17.9231695462743,60.9391720668195,111.226179278945,15.7635144106191,12.6234873099802,14.8292934851463,130.107471884296,66.138348054638,190.792108269014,123.648852830203,106.605514028467,1990.66177718106,1517.65210467603,6.42202359951168,2.93029216480508,48.1968739407426,34.8409879542035,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,5.14114106274891,29.0977174676951,1.6025904330053,4.39794790254655,41.2425307431339,14.6019652173959,0,0.302323556964751,0.188605079755898,2.06711325016541,0.922305443831782,38.2473873888967,2.18120237686503,1.42598951353889,14.2216541071117,12.6502330289999,16.5016869197099,8.17055053809091,0,0,0,0,0,0,3.34911444026059,133.997545304379,29.444657850071,15.2164594657924,75.8476763530808,63.6169841181868,21.2301495747109,26.0231709926837,28.3963756558956,345.987753079633,6.11903496634682,21.1879892189337,14.859854493352,22.0381487569957,5.08594833912666,6.15124024744613,6.40578884978263,1.18984900995699,1.39951452323658,4.28419918793714,20.0480829783174,0,1.21991680276109,1.83609079397062,18.1906817532588,31.0074840519572,18.2066867619508,18.5970275382006,38.4781234716524,28.9041390440698,19.8828580187816,2.81846469342095,0.598066184175915,1.32366792365678,1.94451188344048,2.45403664607689,1.68956125490778,3.99014611395563,2.3436789271911,1.46803082195995,2.65742532908607,9.50499020650956,11.6924114632426,0.608175645870493,1.1298205288131,1.29920822977795,1.25318686967237,3.77494574084403,3.00488623799922,3.69223817936443,3.83672509802961,2.362411006305,2.72230699869469,7.9915462206597,4.42574471545516,7.01261413089414,64.39142894672,0,0,0,41.1493835288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| |||
|short_description=p1@Xdh | |||
}} | |||
Revision as of 15:17, 13 September 2013
| Short description: | p1@Xdh |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Xdh_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1984 |
| Association with transcript: | 0bp_to_ENSMUST00000097283_5end |
| EntrezGene: | Xdh |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 1.89e-10 | 118 |
| endoderm | 1.89e-10 | 118 |
| presumptive endoderm | 1.89e-10 | 118 |
| adult organism | 5.42e-10 | 51 |
| digestive system | 7.96e-10 | 116 |
| digestive tract | 7.96e-10 | 116 |
| primitive gut | 7.96e-10 | 116 |
| trunk mesenchyme | 1.80e-09 | 45 |
| subdivision of digestive tract | 5.16e-09 | 114 |
| intestine | 6.44e-09 | 31 |
| gastrointestinal system | 1.51e-08 | 47 |
| organ component layer | 5.33e-08 | 24 |
| mucosa | 1.41e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
