FFCP PHASE1:Mm9::chr18:60851385..60851416,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=55|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:60851385..60851416,-|id=chr18:60851385..60851416,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!1.24e-17!7;UBERON:0006858!1.24e-17!7;UBERON:0002346!1.70e-12!71;UBERON:0003075!1.70e-12!71;UBERON:0007284!1.70e-12!71;UBERON:0002342!5.83e-12!10;UBERON:0005062!5.83e-12!10;UBERON:0002619!1.22e-09!17;UBERON:0002616!1.32e-09!49;UBERON:0000955!2.46e-09!50;UBERON:0006238!2.46e-09!50;UBERON:0000956!2.84e-09!21;UBERON:0001869!2.84e-09!21;UBERON:0000203!2.84e-09!21;UBERON:0003064!3.49e-08!14;UBERON:0004121!8.15e-08!102;UBERON:0000924!8.15e-08!102;UBERON:0006601!8.15e-08!102;UBERON:0001049!9.83e-08!52;UBERON:0005068!9.83e-08!52;UBERON:0006241!9.83e-08!52;UBERON:0007135!9.83e-08!52;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0002780!3.01e-07!39;UBERON:0001890!3.01e-07!39;UBERON:0006240!3.01e-07!39;UBERON:0003080!5.37e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.44e-46,7;UBERON:0006858,9.44e-46,7;UBERON:0003064,6.28e-23,14;UBERON:0001851,8.42e-10,1;UBERON:0005889,8.42e-10,1;UBERON:0002021,2.50e-08,10;UBERON:0000411,2.50e-08,10;UBERON:0001950,2.50e-08,10;UBERON:0010314,2.77e-07,92;UBERON:0005256,4.71e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.46120192669501,0.693941307064543,3.04465478312141,6.22661842591358,6.17962826265753,7.17291113527799,10.053327306374,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0,0.915001205637253,0,0.347648640384553,1.53429274398198,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,1.54667864109319,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr18:60851385..60851416,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=55 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:60851385..60851416,- | |||
|id=chr18:60851385..60851416,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!1.24e-17!7;UBERON:0006858!1.24e-17!7;UBERON:0002346!1.70e-12!71;UBERON:0003075!1.70e-12!71;UBERON:0007284!1.70e-12!71;UBERON:0002342!5.83e-12!10;UBERON:0005062!5.83e-12!10;UBERON:0002619!1.22e-09!17;UBERON:0002616!1.32e-09!49;UBERON:0000955!2.46e-09!50;UBERON:0006238!2.46e-09!50;UBERON:0000956!2.84e-09!21;UBERON:0001869!2.84e-09!21;UBERON:0000203!2.84e-09!21;UBERON:0003064!3.49e-08!14;UBERON:0004121!8.15e-08!102;UBERON:0000924!8.15e-08!102;UBERON:0006601!8.15e-08!102;UBERON:0001049!9.83e-08!52;UBERON:0005068!9.83e-08!52;UBERON:0006241!9.83e-08!52;UBERON:0007135!9.83e-08!52;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0002780!3.01e-07!39;UBERON:0001890!3.01e-07!39;UBERON:0006240!3.01e-07!39;UBERON:0003080!5.37e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.44e-46,7;UBERON:0006858,9.44e-46,7;UBERON:0003064,6.28e-23,14;UBERON:0001851,8.42e-10,1;UBERON:0005889,8.42e-10,1;UBERON:0002021,2.50e-08,10;UBERON:0000411,2.50e-08,10;UBERON:0001950,2.50e-08,10;UBERON:0010314,2.77e-07,92;UBERON:0005256,4.71e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.46120192669501,0.693941307064543,3.04465478312141,6.22661842591358,6.17962826265753,7.17291113527799,10.053327306374,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0,0.915001205637253,0,0.347648640384553,1.53429274398198,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,1.54667864109319,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:60851385..60851416,- | |||
}} |
Revision as of 16:26, 13 September 2013
Short description: | p@chr18:60851385..60851416, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:60851385..60851416, - |
Coexpression cluster: | MCL_coexpression_mm9:55 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.44e-46 | 7 |
adrenal/interrenal gland | 9.44e-46 | 7 |
intermediate mesoderm | 6.28e-23 | 14 |
cortex | 8.42e-10 | 1 |
zygote cortex | 8.42e-10 | 1 |
occipital lobe | 2.50e-08 | 10 |
visual cortex | 2.50e-08 | 10 |
neocortex | 2.50e-08 | 10 |
structure with developmental contribution from neural crest | 2.77e-07 | 92 |
trunk mesenchyme | 4.71e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.