FFCP PHASE1:Mm9::chr19:21545770..21545772,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:21545770..21545772,-|id=chr19:21545770..21545772,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,3.69e-11,6;CL:0000677,3.69e-11,6;CL:0000584,3.69e-11,6;CL:0000075,1.39e-09,7;CL:0002563,1.78e-07,9;CL:0002251,1.78e-07,9;CL:0000066,2.80e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!4.69e-12!24;UBERON:0000344!1.06e-10!15;UBERON:0000160!2.63e-10!43;UBERON:0005409!3.24e-09!59;UBERON:0001242!8.97e-09!13;UBERON:0000060!8.97e-09!13;UBERON:0001262!8.97e-09!13;UBERON:0004786!8.97e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-20,31;UBERON:0001242,4.78e-19,13;UBERON:0001262,4.78e-19,13;UBERON:0004786,4.78e-19,13;UBERON:0000344,2.27e-16,15;UBERON:0000331,7.43e-13,3;UBERON:0002116,7.43e-13,3;UBERON:0001204,7.43e-13,3;UBERON:0001168,7.43e-13,3;UBERON:0005409,1.52e-12,47;UBERON:0004923,7.85e-10,24;UBERON:0002108,9.11e-10,4;UBERON:0003350,1.78e-07,9;UBERON:0004808,1.78e-07,9;UBERON:0001277,1.78e-07,9|phase1_expression=0,1.39590163055744,3.63999391511629,1.20985684522732,3.50627010962443,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.91763712426868,1.72269589234506,1.7230479846363,0.861884930743556,2.66032787238923,1.76421090831952,1.33038306393183,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0,5.29408339227913,2.04913645487534,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0.85960031981627,1.03134418455488,0,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0,0,2.54805239706646,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,1.65209391491899,5.55346189993443,0,0,0,0,0,0.380451252225118,1.89811624617805,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,2.69645822596266,1.72910439899755,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0.686334519619568,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:21545770..21545772,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:21545770..21545772,- | |||
|id=chr19:21545770..21545772,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.69e-11,6;CL:0000677,3.69e-11,6;CL:0000584,3.69e-11,6;CL:0000075,1.39e-09,7;CL:0002563,1.78e-07,9;CL:0002251,1.78e-07,9;CL:0000066,2.80e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.69e-12!24;UBERON:0000344!1.06e-10!15;UBERON:0000160!2.63e-10!43;UBERON:0005409!3.24e-09!59;UBERON:0001242!8.97e-09!13;UBERON:0000060!8.97e-09!13;UBERON:0001262!8.97e-09!13;UBERON:0004786!8.97e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-20,31;UBERON:0001242,4.78e-19,13;UBERON:0001262,4.78e-19,13;UBERON:0004786,4.78e-19,13;UBERON:0000344,2.27e-16,15;UBERON:0000331,7.43e-13,3;UBERON:0002116,7.43e-13,3;UBERON:0001204,7.43e-13,3;UBERON:0001168,7.43e-13,3;UBERON:0005409,1.52e-12,47;UBERON:0004923,7.85e-10,24;UBERON:0002108,9.11e-10,4;UBERON:0003350,1.78e-07,9;UBERON:0004808,1.78e-07,9;UBERON:0001277,1.78e-07,9 | |||
|phase1_expression=0,1.39590163055744,3.63999391511629,1.20985684522732,3.50627010962443,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.91763712426868,1.72269589234506,1.7230479846363,0.861884930743556,2.66032787238923,1.76421090831952,1.33038306393183,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0,5.29408339227913,2.04913645487534,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0.85960031981627,1.03134418455488,0,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0,0,2.54805239706646,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,1.65209391491899,5.55346189993443,0,0,0,0,0,0.380451252225118,1.89811624617805,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,2.69645822596266,1.72910439899755,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0.686334519619568,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:21545770..21545772,- | |||
}} |
Revision as of 17:11, 13 September 2013
Short description: | p@chr19:21545770..21545772, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:21545770..21545772, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.69e-11 | 6 |
gut absorptive cell | 3.69e-11 | 6 |
enterocyte | 3.69e-11 | 6 |
columnar/cuboidal epithelial cell | 1.39e-09 | 7 |
intestinal epithelial cell | 1.78e-07 | 9 |
epithelial cell of alimentary canal | 1.78e-07 | 9 |
epithelial cell | 2.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.49e-20 | 31 |
intestinal mucosa | 4.78e-19 | 13 |
wall of intestine | 4.78e-19 | 13 |
gastrointestinal system mucosa | 4.78e-19 | 13 |
mucosa | 2.27e-16 | 15 |
ileal mucosa | 7.43e-13 | 3 |
ileum | 7.43e-13 | 3 |
mucosa of small intestine | 7.43e-13 | 3 |
wall of small intestine | 7.43e-13 | 3 |
gastrointestinal system | 1.52e-12 | 47 |
organ component layer | 7.85e-10 | 24 |
small intestine | 9.11e-10 | 4 |
epithelium of mucosa | 1.78e-07 | 9 |
gastrointestinal system epithelium | 1.78e-07 | 9 |
intestinal epithelium | 1.78e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.