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FFCP PHASE1:Mm9::chr1:55144669..55144729,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=15510|HGNC=|MCL_coexpression_id=2669|UniProt=P63038|association_with_transcript=46bp_to_NM_010477,uc007bab.2_5end|description=CAGE_peak_1_at_Hspd1_5end|id=chr1:55144669..55144729,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.23e-14!49;UBERON:0005173!4.23e-14!49;UBERON:0002417!4.23e-14!49;UBERON:0000916!4.23e-14!49;UBERON:0002107!1.23e-11!22;UBERON:0007499!1.23e-11!22;UBERON:0006925!1.23e-11!22;UBERON:0009497!1.23e-11!22;UBERON:0000015!1.23e-11!22;UBERON:0002423!1.23e-11!22;UBERON:0006235!1.23e-11!22;UBERON:0008835!1.23e-11!22;UBERON:0003894!1.23e-11!22;UBERON:0004161!1.23e-11!22;UBERON:0008836!1.23e-11!22;UBERON:0003914!2.84e-11!47;UBERON:0009854!3.98e-11!23;UBERON:0009856!3.98e-11!23;UBERON:0002365!1.99e-10!25;UBERON:0002330!1.99e-10!25;UBERON:0002368!1.98e-08!60;UBERON:0009569!8.30e-08!66;UBERON:0002530!1.61e-07!65;UBERON:0005057!1.88e-07!51;UBERON:0000949!2.46e-07!72;UBERON:0003929!6.54e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.23e-14,49;UBERON:0005173,4.23e-14,49;UBERON:0002417,4.23e-14,49;UBERON:0000916,4.23e-14,49;UBERON:0002107,1.23e-11,22;UBERON:0007499,1.23e-11,22;UBERON:0006925,1.23e-11,22;UBERON:0009497,1.23e-11,22;UBERON:0000015,1.23e-11,22;UBERON:0002423,1.23e-11,22;UBERON:0006235,1.23e-11,22;UBERON:0008835,1.23e-11,22;UBERON:0003894,1.23e-11,22;UBERON:0004161,1.23e-11,22;UBERON:0008836,1.23e-11,22;UBERON:0003914,2.84e-11,47;UBERON:0009854,3.98e-11,23;UBERON:0009856,3.98e-11,23;UBERON:0002365,1.99e-10,25;UBERON:0002330,1.99e-10,25;UBERON:0002368,1.98e-08,60;UBERON:0009569,8.30e-08,66;UBERON:0002530,1.61e-07,65;UBERON:0000949,2.46e-07,72;UBERON:0003929,6.54e-07,55;UBERON:0003104,7.24e-07,61;UBERON:0009142,7.24e-07,61|phase1_expression=104.737346006535,102.249794438333,67.7948866690409,91.3441918146627,85.152274090879,280.69414263668,283.839358323564,90.515449732545,405.753097241104,419.911760221656,651.998023002723,791.020728597756,66.7682846731702,87.1581412117404,282.477078019682,228.999527417893,141.311499381886,65.1429371464761,74.1789085807047,83.604761404212,109.70584429488,232.539407712473,259.893790193241,293.266110980314,243.862065774402,120.014480500039,165.843368521244,229.476862810472,176.721780094428,235.900201455295,249.668554997873,136.531594793821,147.000484232712,63.3926724061755,429.522358570145,486.901276255024,422.222228750579,16.7412652294763,26.5654017138092,23.5585684788209,10.5881667845583,9.56263678941824,12.62326917881,174.367092896175,171.022882967321,224.110584389413,14.0830441982647,50.1457859675027,33.6119859583742,42.7745777963423,67.7534280666755,44.5632949531412,82.0456943622331,72.5362142011344,100.828139742739,131.459571814369,111.748041576115,84.5702231335005,60.6949382578793,64.536899471188,74.158274210223,52.8597470027846,39.1289710288901,24.2972923665978,12.8552627133707,21.314403448383,23.0692085099172,22.2846617086502,90.313652320684,63.722802892558,79.0821854681196,69.6988401945281,66.2605622854841,82.681289470094,70.7339576114584,52.3954708367712,58.361416929676,104.065180539428,114.590473809158,64.8880535632554,72.1837508023012,70.8442183957194,81.8006187074046,68.6570384238649,100.082852293811,129.931206193887,128.988742803987,109.230075253626,305.479463906064,234.120693210822,119.714033833793,357.936332824257,409.342742892066,542.401707596006,545.812190656042,786.287186855824,393.384820789037,228.547062577175,205.230943636266,166.06960001986,110.562084524694,87.2620046417361,35.6727335589304,71.1066703153331,206.532453124698,192.80685762655,191.088240215588,494.073647544372,164.943431883248,724.397638636345,804.798430868104,1484.26920677169,1288.21816767234,1507.98001872899,836.526062563404,684.757256155402,85.7766538038277,588.51938266404,121.191645617133,170.664026694517,147.301292813082,161.948334547164,165.888667484129,68.8034872977136,55.712824012379,218.160325148137,225.492064320142,245.960119707297,327.587045394361,99.4609845648023,68.1675898199753,63.3297934648837,77.1779981653708,58.814555185976,102.647294012423,92.3152786855541,108.662601228287,110.224575960542,122.570537840332,164.14464759145,320.616771460102,211.280033974362,180.062129805349,164.418956258765,86.1342079255811,104.797023193007,86.6740952177492,117.968737056991,323.783125385129,254.91499606622,184.748680372146,184.34361097159,182.677042741218,168.205796430206,164.831491262763,245.608285254021,325.826918913341,271.24469409891,284.731826394384,403.481004899158,411.827761326805,370.387660425308,337.124503473339,339.418299764272,349.569277802799,353.21906207587,326.488729503337,240.303074591635,295.220370744784,287.128894674338,229.667937443409,287.867775240479,310.663413136837,213.925031504033,84.9571392199074,88.6008712585639,37.667741260153,422.063104395017,332.089806083359,329.776074041823,525.006037426208,485.048876719139,436.083343979791,307.975288676233,213.063548633486,210.64996309201,176.437316577789,143.44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|EntrezGene=15510
|HGNC=
|MCL_coexpression_id=2669
|UniProt=P63038
|association_with_transcript=46bp_to_NM_010477,uc007bab.2_5end
|description=CAGE_peak_1_at_Hspd1_5end
|id=chr1:55144669..55144729,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!4.23e-14!49;UBERON:0005173!4.23e-14!49;UBERON:0002417!4.23e-14!49;UBERON:0000916!4.23e-14!49;UBERON:0002107!1.23e-11!22;UBERON:0007499!1.23e-11!22;UBERON:0006925!1.23e-11!22;UBERON:0009497!1.23e-11!22;UBERON:0000015!1.23e-11!22;UBERON:0002423!1.23e-11!22;UBERON:0006235!1.23e-11!22;UBERON:0008835!1.23e-11!22;UBERON:0003894!1.23e-11!22;UBERON:0004161!1.23e-11!22;UBERON:0008836!1.23e-11!22;UBERON:0003914!2.84e-11!47;UBERON:0009854!3.98e-11!23;UBERON:0009856!3.98e-11!23;UBERON:0002365!1.99e-10!25;UBERON:0002330!1.99e-10!25;UBERON:0002368!1.98e-08!60;UBERON:0009569!8.30e-08!66;UBERON:0002530!1.61e-07!65;UBERON:0005057!1.88e-07!51;UBERON:0000949!2.46e-07!72;UBERON:0003929!6.54e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.23e-14,49;UBERON:0005173,4.23e-14,49;UBERON:0002417,4.23e-14,49;UBERON:0000916,4.23e-14,49;UBERON:0002107,1.23e-11,22;UBERON:0007499,1.23e-11,22;UBERON:0006925,1.23e-11,22;UBERON:0009497,1.23e-11,22;UBERON:0000015,1.23e-11,22;UBERON:0002423,1.23e-11,22;UBERON:0006235,1.23e-11,22;UBERON:0008835,1.23e-11,22;UBERON:0003894,1.23e-11,22;UBERON:0004161,1.23e-11,22;UBERON:0008836,1.23e-11,22;UBERON:0003914,2.84e-11,47;UBERON:0009854,3.98e-11,23;UBERON:0009856,3.98e-11,23;UBERON:0002365,1.99e-10,25;UBERON:0002330,1.99e-10,25;UBERON:0002368,1.98e-08,60;UBERON:0009569,8.30e-08,66;UBERON:0002530,1.61e-07,65;UBERON:0000949,2.46e-07,72;UBERON:0003929,6.54e-07,55;UBERON:0003104,7.24e-07,61;UBERON:0009142,7.24e-07,61
|phase1_expression=104.737346006535,102.249794438333,67.7948866690409,91.3441918146627,85.152274090879,280.69414263668,283.839358323564,90.515449732545,405.753097241104,419.911760221656,651.998023002723,791.020728597756,66.7682846731702,87.1581412117404,282.477078019682,228.999527417893,141.311499381886,65.1429371464761,74.1789085807047,83.604761404212,109.70584429488,232.539407712473,259.893790193241,293.266110980314,243.862065774402,120.014480500039,165.843368521244,229.476862810472,176.721780094428,235.900201455295,249.668554997873,136.531594793821,147.000484232712,63.3926724061755,429.522358570145,486.901276255024,422.222228750579,16.7412652294763,26.5654017138092,23.5585684788209,10.5881667845583,9.56263678941824,12.62326917881,174.367092896175,171.022882967321,224.110584389413,14.0830441982647,50.1457859675027,33.6119859583742,42.7745777963423,67.7534280666755,44.5632949531412,82.0456943622331,72.5362142011344,100.828139742739,131.459571814369,111.748041576115,84.5702231335005,60.6949382578793,64.536899471188,74.158274210223,52.8597470027846,39.1289710288901,24.2972923665978,12.8552627133707,21.314403448383,23.0692085099172,22.2846617086502,90.313652320684,63.722802892558,79.0821854681196,69.6988401945281,66.2605622854841,82.681289470094,70.7339576114584,52.3954708367712,58.361416929676,104.065180539428,114.590473809158,64.8880535632554,72.1837508023012,70.8442183957194,81.8006187074046,68.6570384238649,100.082852293811,129.931206193887,128.988742803987,109.230075253626,305.479463906064,234.120693210822,119.714033833793,357.936332824257,409.342742892066,542.401707596006,545.812190656042,786.287186855824,393.384820789037,228.547062577175,205.230943636266,166.06960001986,110.562084524694,87.2620046417361,35.6727335589304,71.1066703153331,206.532453124698,192.80685762655,191.088240215588,494.073647544372,164.943431883248,724.397638636345,804.798430868104,1484.26920677169,1288.21816767234,1507.98001872899,836.526062563404,684.757256155402,85.7766538038277,588.51938266404,121.191645617133,170.664026694517,147.301292813082,161.948334547164,165.888667484129,68.8034872977136,55.712824012379,218.160325148137,225.492064320142,245.960119707297,327.587045394361,99.4609845648023,68.1675898199753,63.3297934648837,77.1779981653708,58.814555185976,102.647294012423,92.3152786855541,108.662601228287,110.224575960542,122.570537840332,164.14464759145,320.616771460102,211.280033974362,180.062129805349,164.418956258765,86.1342079255811,104.797023193007,86.6740952177492,117.968737056991,323.783125385129,254.91499606622,184.748680372146,184.34361097159,182.677042741218,168.205796430206,164.831491262763,245.608285254021,325.826918913341,271.24469409891,284.731826394384,403.481004899158,411.827761326805,370.387660425308,337.124503473339,339.418299764272,349.569277802799,353.21906207587,326.488729503337,240.303074591635,295.220370744784,287.128894674338,229.667937443409,287.867775240479,310.663413136837,213.925031504033,84.9571392199074,88.6008712585639,37.667741260153,422.063104395017,332.089806083359,329.776074041823,525.006037426208,485.048876719139,436.083343979791,307.975288676233,213.063548633486,210.64996309201,176.437316577789,143.44761634167,151.487095691556,219.31193571163,252.016966153893,161.702713882546,161.976387413932,373.249890695984,270.498565615393,301.811267866756,262.417715137798,199.887086687408,218.861654987054,378.915249863639,434.572478664925,395.364513205449,691.327526367231,537.574930617255,611.298474802061,532.473482127334,402.677340956178,381.542266728323,395.688573668326,358.757083401161,463.706748576601,634.236864464468,891.362880469598,480.433963440038,520.790876428202,576.890157231203,780.019953993274,622.834586080107,72.9775101158088,371.21367565838,280.951619386053,251.392472033054,180.946181430435,94.4735291971841,69.032655856944,44.6856053594359,76.2954097473964,49.3866257916768,46.4013376793287,70.7889519571988,67.0017729639675,40.7910345199863,52.7769493787453,88.6566264624497,228.178622680833,234.822171105327,113.348716531381,116.039569726281,520.165581680191,146.938079632945,198.770178232242,212.008238153075,148.642144435631,218.417481328633,190.047268992282,176.92283174302,204.024593644147,185.582469773683,213.850687869069,63.9429419679396,244.562766813847,135.685989994448,102.618784392753,123.562622106429,115.488270355768,385.778430850266,337.695413129627,298.939051413099,179.248248978629,163.555498706169,110.865737769167,129.418007693992,163.275799300202,155.806121662357,128.610702461499,109.323675843078,122.21781846561,230.118078172014,127.030227474665,151.964957837399,134.95591780177,123.074484145429,114.03247127727,56.0215506370863,373.832030945491,143.833976116534,155.472520628748,118.223443359041,128.525683649941,183.773482256091,146.827983123858,142.802582778203,215.40433826946,102.540192011812,192.058870016786,166.966976182247,331.127814937044,238.097729653929,237.027790868258,208.188137617936,177.117524053597,197.891353585652,207.852760601853,147.019275174327,319.657521513737,270.414891278709,335.680599274158,271.814784818809,236.705019100857,188.00089886044,167.703861666707,187.679010402549,208.291262079911,88.8515217714304,32.1304975049988,369.455385274672,400.409546906176,377.624207764141,467.94604045982,337.574338730575,172.280426331967,124.084778756284,143.237864485521,67.8851379521077,57.6060012515731,139.044893076398,295.77608910835,330.831993027909,395.608905967386,277.312351588929,223.913886838486,178.971024335234,183.135013696476,204.053195345206,147.53637768408,146.197968448419,136.246117274174,139.892017745039,71.2949103307571,127.422475591749,590.92660788176,938.406940135116,650.552888410804,67.8095475052988,120.867514190561,149.451725402088,120.475029042435,81.2546808537289,83.0185208647088,71.3504116586124,82.4969539352731,83.3487934366885,51.3811889827982,45.323633843382,54.0018000185445,61.6940048417182,61.6273676218518,54.3648327339411,347.064890321487,225.050028598182,243.978322622658,253.803412619299,266.418329700165,277.603697759521,321.591015128937,300.811183568786,318.351855915081,277.714235728413,328.25569335786,291.993576465646,298.154559784106,280.878343600162,268.453381898536,287.205095843693,235.708718971836,260.813266066929,266.619577819739,268.932427085544,270.180970879707,283.783814048781,291.607460305574,298.541539762803,276.399250279826,261.289909169497,275.306599173523,266.752687397973,287.768917239381,259.808871777533,259.21751460132,242.813549055764,228.350922088687,268.040735251721,234.381532342087,148.887104451016,245.862120476124,160.723548428127,168.525020552651,175.811361038254,198.942602962322
|short_description=p1@Hspd1
}}

Revision as of 20:33, 13 September 2013

Short description:p1@Hspd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hspd1_5end
Coexpression cluster:MCL_coexpression_mm9:2669
Association with transcript: 46bp_to_NM_010477, uc007bab.2_5end
EntrezGene:Hspd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hspd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7104.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5102.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I667.79
CD326+ enterocyte, pool1.CNhs13542.11848-124I391.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I485.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7280.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8283.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E990.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7405.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2419.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6652.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1791.02
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E466.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E887.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1282.48
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3229.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5141.31
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A265.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A474.18
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A683.60
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3109.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2232.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9259.89
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1293.27
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2243.86
GP2+ M cell, pool1.CNhs13228.11845-124H9120.01
GP2+ M cell, pool2.CNhs13231.11846-124I1165.84
GP2+ M cell, pool3.CNhs13240.11847-124I2229.48
Ileum epithelium, pool1.CNhs13199.10252-104B9176.72
Ileum epithelium, pool2.CNhs13232.10253-104C1235.90
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8249.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3136.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6147.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5429.52
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6486.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7422.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8174.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9171.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3224.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C250.15
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C342.77
Mouse Astrocytes, donor2.CNhs12078.11552-120C467.75
Mouse Astrocytes, donor3.CNhs12107.11633-122C444.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A282.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I972.54
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1100.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1131.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C584.57
Mouse Granule cells, donor1.CNhs12131.11713-123C360.69
Mouse Granule cells, donor2.CNhs12357.11731-123E364.54
Mouse Granule cells, donor3.CNhs12108.11636-122C774.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C652.86
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C724.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D221.31
Mouse Microglia, donor1.CNhs12629.11718-123C823.07
Mouse Microglia, donor2.CNhs12634.11736-123E822.28
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D590.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F563.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D979.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F169.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D566.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D282.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F270.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D652.40
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D358.36
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3104.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7114.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D464.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F472.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D870.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E568.66
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6100.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6129.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6128.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1109.23
Mouse Schwann, donor1.CNhs12507.11728-123D9305.48
Mouse Schwann, donor2.CNhs12573.11746-123F9234.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3119.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7357.94
Mouse hepatocyte, donor1.CNhs13078.11714-123C4409.34
Mouse hepatocyte, donor3.CNhs12615.11637-122C8542.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F4545.81
Mouse hepatocyte, donor8.CNhs13091.11824-124F6786.29
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7393.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7228.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3205.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8166.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6110.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H187.26
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1206.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2192.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3191.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6494.07
accessory axillary lymph node, adult.CNhs10475.1063-29H9164.94
adrenal gland, adult.CNhs10508.49-24D7724.40
adrenal gland, embryo E14.CNhs11038.406-44C5804.80
adrenal gland, embryo E16.CNhs11004.1254-43D61484.27
adrenal gland, embryo E17.CNhs11043.1263-45I11288.22
adrenal gland, embryo E18.CNhs11026.1262-18F51507.98
adrenal gland, neonate N00.CNhs11191.1311-23C1836.53
adrenal gland, neonate N25.CNhs11223.1377-27I3684.76
amnion, adult pregnant day17.5.CNhs10488.583-22A885.78
aorta, adult.CNhs10498.46-23H1588.52
bone (os femoris), adult.CNhs10483.56-12G2121.19
bone (os femoris), neonate N02.CNhs11227.1985-43F5170.66
bone (os femoris), neonate N16.CNhs11225.1525-43A6147.30
bone (os femoris), neonate N20.CNhs11195.1350-25C3161.95
cecum, adult.CNhs10467.37-13H4165.89
cerebellum, adult.CNhs10494.15-8B268.80
cerebellum, neonate N30.CNhs11135.1395-42I255.71
colon, adult.CNhs10468.36-18H7218.16
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7225.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1245.96
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4327.59
corpora quadrigemina, adult.CNhs10501.16-22A499.46
corpus striatum, adult.CNhs10487.19-21D868.17
corpus striatum, neonate N00.CNhs11226.630-43F163.33
cortex, adult.CNhs10473.12-14D577.18
cortex, neonate N30.CNhs11107.1392-42F258.81
diencephalon, adult.CNhs10482.20-12F2102.65
diencephalon, neonate N30.CNhs11201.1388-42B292.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1108.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2110.22
epididymis, adult.CNhs10490.58-23B2122.57
eyeball, adult.CNhs10484.31-12G4164.14
eyeball, embryo E12.CNhs11016.345-16C6320.62
eyeball, embryo E14.CNhs10521.399-16E2211.28
eyeball, embryo E15.CNhs10593.426-16C9180.06
eyeball, embryo E17.CNhs11023.1261-18D4164.42
eyeball, neonate N00.CNhs11207.633-15C686.13
eyeball, neonate N01.CNhs11140.1532-43E7104.80
eyeball, neonate N02.CNhs11205.1551-44G886.67
eyeball, neonate N16.CNhs11188.777-19A2117.97
forelimb, embryo E11.CNhs10596.335-25E2323.78
forelimb, embryo E12.CNhs10600.359-14H2254.91
forelimb, embryo E13.CNhs10589.384-1E2184.75
forelimb, embryo E14.CNhs10577.413-26A8184.34
forelimb, embryo E15.CNhs11007.437-20E7182.68
forelimb, embryo E17.CNhs10598.1517-43C4168.21
forelimb, embryo E18.CNhs11008.1520-43B5164.83
gonad, embryo E13.CNhs11044.1564-45I6245.61
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8325.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2271.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5284.73
heart, embryo E11.CNhs10586.331-24E9403.48
heart, embryo E12.CNhs11015.353-12F5411.83
heart, embryo E13.CNhs11013.376-3I9370.39
heart, embryo E14.CNhs10597.403-26D4337.12
heart, embryo E15.CNhs11017.431-16C8339.42
heart, embryo E16.CNhs11021.457-17C6349.57
heart, embryo E17.CNhs11025.479-18E5353.22
heart, embryo E18.CNhs11030.1283-20G3326.49
heart, neonate N00.CNhs11213.639-21E3240.30
heart, neonate N03.CNhs11221.1349-25I2295.22
heart, neonate N10.CNhs11118.749-24G1287.13
heart, neonate N16.CNhs11209.782-15G1229.67
heart, neonate N20.CNhs11127.821-26I6287.87
heart, neonate N25.CNhs11196.1351-25D3310.66
heart, neonate N30.CNhs11202.1390-42D2213.93
hippocampus, adult.CNhs10478.13-16E884.96
hippocampus, neonate N00.CNhs11228.627-43G188.60
intestinal mucosa, adult.CNhs10506.860-29I337.67
intestine, adult.CNhs10496.178-9A3422.06
intestine, embryo E12.CNhs11019.1251-16I5332.09
intestine, embryo E13.CNhs11010.381-16D5329.78
intestine, embryo E15.CNhs10602.976-16D8525.01
intestine, embryo E16.CNhs10585.463-22H4485.05
intestine, embryo E17.CNhs10582.482-18D3436.08
intestine, embryo E18.CNhs10526.1289-20F7307.98
intestine, neonate N00.CNhs11126.644-26D1213.06
intestine, neonate N01.CNhs11192.1322-23E9210.65
intestine, neonate N06.CNhs11102.688-20B8176.44
intestine, neonate N07.CNhs11095.720-20F2143.45
intestine, neonate N10.CNhs11098.755-23A5151.49
intestine, neonate N20.CNhs11187.827-18D1219.31
intestine, neonate N25.CNhs11121.1352-25E3252.02
intestine, neonate N30.CNhs11131.1384-42G1161.70
kidney, embryo E14.CNhs10606.411-4I9161.98
kidney, embryo E15.CNhs10997.434-16F8373.25
kidney, embryo E16.CNhs10584.464-22A5270.50
kidney, embryo E17.CNhs11028.483-18I2301.81
kidney, embryo E18.CNhs11001.1288-20C7262.42
kidney, neonate N00.CNhs11214.646-21G7199.89
kidney, neonate N10.CNhs11206.758-6D5218.86
kidney, neonate N20.CNhs11113.832-19I1378.92
kidney, neonate N25.CNhs11122.1353-25F3434.57
kidney, neonate N30.CNhs11203.1385-42H1395.36
liver, adult pregnant day01.CNhs10466.508-5B2691.33
liver, embryo E12.CNhs10601.355-15F8537.57
liver, embryo E13.CNhs10524.378-3H6611.30
liver, embryo E14.CNhs10594.409-16E1532.47
liver, embryo E15.CNhs10520.433-16D7402.68
liver, embryo E16.CNhs10523.462-17F5381.54
liver, embryo E17.CNhs10510.481-18A3395.69
liver, embryo E18.CNhs10579.499-43G4358.76
liver, neonate N00.CNhs11117.641-24F4463.71
liver, neonate N03.CNhs11123.1345-25G2634.24
liver, neonate N06.CNhs11101.684-20A8891.36
liver, neonate N07.CNhs11103.716-20H2480.43
liver, neonate N10.CNhs11115.751-24B9520.79
liver, neonate N20.CNhs11220.823-25A3576.89
liver, neonate N25.CNhs11198.1368-26H1780.02
liver, neonate N30.CNhs11106.1382-42D1622.83
lung, adult.CNhs10474.28-22B172.98
lung, embryo E12.CNhs10522.354-16G2371.21
lung, embryo E14.CNhs10604.404-26F8280.95
lung, embryo E15.CNhs11020.432-17C5251.39
lung, embryo E16.CNhs10998.458-17B6180.95
lung, embryo E17.CNhs10605.480-44A694.47
lung, embryo E18.CNhs10583.1287-20I669.03
lung, neonate N00.CNhs11224.640-42C644.69
lung, neonate N06.CNhs11212.683-20E576.30
lung, neonate N07.CNhs11111.715-19A349.39
lung, neonate N10.CNhs11219.750-23E646.40
lung, neonate N20.CNhs11109.822-18A470.79
lung, neonate N25.CNhs11119.1359-25C767.00
lung, neonate N30.CNhs11133.1394-42H240.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A152.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A188.66
mammary gland, adult lactating day02.CNhs10480.595-22B6228.18
mammary gland, adult pregnant day19.CNhs10476.588-5H2234.82
medulla oblongata, adult.CNhs10477.17-12C2113.35
medulla oblongata, neonate N30.CNhs11200.1396-42A3116.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7520.17
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2146.94
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1198.77
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2212.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3148.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7218.42
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8190.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9176.92
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4204.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5185.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6213.85
olfactory brain, adult.CNhs10489.18-22I963.94
ovary, adult.CNhs10507.91-2I7244.56
ovary, embryo E18.CNhs11040.505-44H7135.69
ovary, neonate N00.CNhs11217.1299-22I4102.62
oviduct, adult pregnant day01.CNhs10500.988-6G6123.56
pancreas, adult.CNhs10486.34-16E4115.49
pancreas, embryo E14.CNhs11012.405-44F4385.78
pancreas, embryo E15.CNhs11042.1556-45F2337.70
pancreas, embryo E16.CNhs11003.460-26E5298.94
pancreas, embryo E17.CNhs10599.1558-45G3179.25
pancreas, embryo E18.CNhs10580.1535-43I7163.56
pancreas, neonate N00.CNhs11105.645-26G9110.87
pancreas, neonate N01.CNhs11138.1531-43D7129.42
pancreas, neonate N02.CNhs11139.1539-43D8163.28
pancreas, neonate N16.CNhs11136.787-43B6155.81
pancreas, neonate N25.CNhs11094.1555-45E2128.61
pancreas, neonate N30.CNhs11182.1548-44H5109.32
pituitary gland, adult.CNhs10493.21-1G8122.22
pituitary gland, embryo E12.CNhs11018.346-16E6230.12
pituitary gland, embryo E13.CNhs11009.370-44C7127.03
pituitary gland, embryo E14.CNhs11037.398-44A5151.96
pituitary gland, embryo E15.CNhs10592.427-16B9134.96
pituitary gland, embryo E16.CNhs11036.449-43F6123.07
pituitary gland, embryo E17.CNhs11039.1265-44F5114.03
pituitary gland, neonate N00.CNhs11190.1308-22E956.02
placenta, adult pregnant day10.CNhs10472.539-13I7373.83
placenta, adult pregnant day17.CNhs10464.577-18G3143.83
prostate, adult.CNhs10470.859-1F8155.47
skin, adult.CNhs10492.30-1C3118.22
skin, neonate N00.CNhs11124.650-25G4128.53
skin, neonate N03.CNhs11215.662-22H3183.77
skin, neonate N06.CNhs11097.693-20I5146.83
skin, neonate N10.CNhs11108.762-6C4142.80
small intestine, neonate N16.CNhs11114.790-21I1215.40
spinal cord, adult.CNhs10505.24-13C9102.54
spleen, adult.CNhs10465.25-2G2192.06
spleen, embryo E16.CNhs11035.461-43C1166.97
spleen, embryo E18.CNhs11011.1271-21F2331.13
spleen, neonate N10.CNhs11116.752-24D1238.10
spleen, neonate N20.CNhs11112.824-19H1237.03
spleen, neonate N25.CNhs11099.1354-25G3208.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6177.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9197.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3207.85
stomach, adult.CNhs10503.33-1H6147.02
stomach, embryo E12.CNhs10588.356-43E3319.66
stomach, embryo E15.CNhs10603.1252-16G8270.41
stomach, embryo E16.CNhs11022.459-17D4335.68
stomach, embryo E17.CNhs11006.1035-18D5271.81
stomach, embryo E18.CNhs10999.1286-20C6236.71
stomach, neonate N03.CNhs11193.1340-24B8188.00
stomach, neonate N07.CNhs11210.718-18A9167.70
stomach, neonate N25.CNhs11104.1355-25E4187.68
stomach, neonate N30.CNhs11134.1386-42I1208.29
submandibular gland, adult.CNhs10469.59-29C188.85
testis, adult.CNhs10504.57-7G532.13
testis, embryo E13.CNhs11031.389-23F5369.46
testis, embryo E15.CNhs11034.443-27C5400.41
testis, embryo E16.CNhs11033.470-26G5377.62
testis, embryo E17.CNhs11029.486-18I5467.95
testis, embryo E18.CNhs11027.503-18G5337.57
testis, neonate N00.CNhs11189.1300-22B7172.28
testis, neonate N07.CNhs11222.726-26I4124.08
testis, neonate N10.CNhs11204.763-44D9143.24
testis, neonate N20.CNhs11110.839-18H367.89
testis, neonate N30.CNhs11130.1391-42E257.61
thymus, adult.CNhs10471.38-12B5139.04
thymus, embryo E14.CNhs11041.402-44I4295.78
thymus, embryo E15.CNhs11005.430-45I2330.83
thymus, embryo E16.CNhs11002.456-26C5395.61
thymus, embryo E17.CNhs10581.478-18C1277.31
thymus, embryo E18.CNhs10595.1273-19G4223.91
thymus, neonate N02.CNhs11181.1541-43F8178.97
thymus, neonate N03.CNhs11137.2104-43C7183.14
thymus, neonate N06.CNhs11197.681-26C4204.05
thymus, neonate N07.CNhs11211.713-19D3147.54
thymus, neonate N10.CNhs11194.748-24E4146.20
thymus, neonate N20.CNhs11186.820-7A2136.25
thymus, neonate N25.CNhs11125.1362-25G7139.89
thymus, neonate N30.CNhs11132.1393-42G271.29
tongue, adult.CNhs10499.32-1B4127.42
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3590.93
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7938.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5650.55
urinary bladder, adult.CNhs10481.879-12E467.81
uterus, adult pregnant day19.CNhs10497.590-15F5120.87
uterus, adult.CNhs10509.92-27E5149.45
vagina, adult.CNhs10502.89-27D5120.48
vesicular gland, adult.CNhs10491.51-27F881.25
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A183.02
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A271.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A382.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D783.35
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A451.38
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A545.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A654.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A761.69
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A861.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A954.36
whole body, embryo E11.CNhs11014.324-5I8347.06
whole body, embryo E12.CNhs10587.857-27C9225.05
whole body, embryo E13.CNhs10512.372-23H2243.98
whole body, embryo E14.5.CNhs10578.420-27D2253.80
whole body, embryo E14.CNhs10519.395-14B1266.42
whole body, embryo E16.CNhs10514.453-14F2277.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5321.59
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5300.81
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5318.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5277.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5328.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5291.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5298.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5280.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5268.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5287.21
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5235.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5260.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5266.62
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5268.93
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5270.18
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5283.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5291.61
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5298.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5276.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5261.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5275.31
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5266.75
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5287.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5259.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5259.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5242.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5228.35
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5268.04
whole body, embryo E17.5.CNhs10513.490-9F9234.38
whole body, embryo E17.CNhs10517.475-3I5148.89
whole body, embryo E18.CNhs10516.493-3B3245.86
whole body, neonate N00.CNhs10525.657-19C2160.72
whole body, neonate N01.CNhs10576.659-23C6168.53
whole body, neonate N06.CNhs10515.692-21D1175.81
whole body, neonate N10.CNhs10518.761-6B4198.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element4.23e-1449
abdominal segment element4.23e-1449
abdominal segment of trunk4.23e-1449
abdomen4.23e-1449
liver1.23e-1122
epithelial sac1.23e-1122
digestive gland1.23e-1122
epithelium of foregut-midgut junction1.23e-1122
anatomical boundary1.23e-1122
hepatobiliary system1.23e-1122
foregut-midgut junction1.23e-1122
hepatic diverticulum1.23e-1122
liver primordium1.23e-1122
septum transversum1.23e-1122
liver bud1.23e-1122
epithelial tube2.84e-1147
digestive tract diverticulum3.98e-1123
sac3.98e-1123
exocrine gland1.99e-1025
exocrine system1.99e-1025
endocrine gland1.98e-0860
subdivision of trunk8.30e-0866
gland1.61e-0765
endocrine system2.46e-0772
gut epithelium6.54e-0755
mesenchyme7.24e-0761
entire embryonic mesenchyme7.24e-0761







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