FFCP PHASE1:Mm9::chr1:84949289..84949294,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:84949289..84949294,+|id=chr1:84949289..84949294,+|ontology_enrichment_celltype=CL:0000239!5.59e-24!6;CL:0000677!5.59e-24!6;CL:0000212!5.59e-24!6;CL:0000584!5.59e-24!6;CL:0000075!1.27e-20!7;CL:0002563!3.87e-16!9;CL:0002251!3.87e-16!9;CL:0002076!7.93e-10!15;CL:0000066!6.82e-09!25;CL:0000223!1.93e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,3.10e-20,6;CL:0000677,3.10e-20,6;CL:0000584,3.10e-20,6;CL:0000075,1.59e-17,7;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.21e-28!15;UBERON:0001962!2.38e-18!2;UBERON:0001961!2.38e-18!2;UBERON:0001744!2.38e-18!2;UBERON:0004923!7.42e-18!24;UBERON:0001242!2.68e-17!13;UBERON:0000060!2.68e-17!13;UBERON:0001262!2.68e-17!13;UBERON:0004786!2.68e-17!13;UBERON:0003350!3.87e-16!9;UBERON:0004808!3.87e-16!9;UBERON:0001277!3.87e-16!9;UBERON:0000485!2.82e-13!11;UBERON:0002465!1.42e-12!3;UBERON:0003199!8.42e-10!1|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0004923,6.63e-12,24;UBERON:0000485,1.36e-11,11;UBERON:0000331,4.56e-11,3;UBERON:0002116,4.56e-11,3;UBERON:0001204,4.56e-11,3;UBERON:0001168,4.56e-11,3;UBERON:0000160,1.87e-09,31;UBERON:0002108,1.23e-08,4|phase1_expression=0,0.348975407639361,0,2.41971369045464,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0,0,0.215471232685889,3.23039813075836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:84949289..84949294,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:84949289..84949294,+ | |||
|id=chr1:84949289..84949294,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.59e-24!6;CL:0000677!5.59e-24!6;CL:0000212!5.59e-24!6;CL:0000584!5.59e-24!6;CL:0000075!1.27e-20!7;CL:0002563!3.87e-16!9;CL:0002251!3.87e-16!9;CL:0002076!7.93e-10!15;CL:0000066!6.82e-09!25;CL:0000223!1.93e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.10e-20,6;CL:0000677,3.10e-20,6;CL:0000584,3.10e-20,6;CL:0000075,1.59e-17,7;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.21e-28!15;UBERON:0001962!2.38e-18!2;UBERON:0001961!2.38e-18!2;UBERON:0001744!2.38e-18!2;UBERON:0004923!7.42e-18!24;UBERON:0001242!2.68e-17!13;UBERON:0000060!2.68e-17!13;UBERON:0001262!2.68e-17!13;UBERON:0004786!2.68e-17!13;UBERON:0003350!3.87e-16!9;UBERON:0004808!3.87e-16!9;UBERON:0001277!3.87e-16!9;UBERON:0000485!2.82e-13!11;UBERON:0002465!1.42e-12!3;UBERON:0003199!8.42e-10!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0004923,6.63e-12,24;UBERON:0000485,1.36e-11,11;UBERON:0000331,4.56e-11,3;UBERON:0002116,4.56e-11,3;UBERON:0001204,4.56e-11,3;UBERON:0001168,4.56e-11,3;UBERON:0000160,1.87e-09,31;UBERON:0002108,1.23e-08,4 | |||
|phase1_expression=0,0.348975407639361,0,2.41971369045464,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0,0,0.215471232685889,3.23039813075836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:84949289..84949294,+ | |||
}} |
Revision as of 21:06, 13 September 2013
Short description: | p@chr1:84949289..84949294, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:84949289..84949294, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.10e-20 | 6 |
gut absorptive cell | 3.10e-20 | 6 |
enterocyte | 3.10e-20 | 6 |
columnar/cuboidal epithelial cell | 1.59e-17 | 7 |
intestinal epithelial cell | 6.62e-14 | 9 |
epithelial cell of alimentary canal | 6.62e-14 | 9 |
endo-epithelial cell | 8.43e-09 | 15 |
endodermal cell | 7.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.26e-21 | 13 |
wall of intestine | 5.26e-21 | 13 |
gastrointestinal system mucosa | 5.26e-21 | 13 |
mucosa | 2.29e-18 | 15 |
epithelium of mucosa | 6.62e-14 | 9 |
gastrointestinal system epithelium | 6.62e-14 | 9 |
intestinal epithelium | 6.62e-14 | 9 |
organ component layer | 6.63e-12 | 24 |
simple columnar epithelium | 1.36e-11 | 11 |
ileal mucosa | 4.56e-11 | 3 |
ileum | 4.56e-11 | 3 |
mucosa of small intestine | 4.56e-11 | 3 |
wall of small intestine | 4.56e-11 | 3 |
intestine | 1.87e-09 | 31 |
small intestine | 1.23e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.