FFCP PHASE1:Mm9::chr1:89023508..89023520,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:89023508..89023520,+|id=chr1:89023508..89023520,+|ontology_enrichment_celltype=CL:0000473!1.87e-12!3;CL:0000627!1.87e-12!3;CL:0000682!1.87e-12!3;CL:0000239!8.58e-11!6;CL:0000677!8.58e-11!6;CL:0000212!8.58e-11!6;CL:0000584!8.58e-11!6;CL:0000075!2.84e-09!7;CL:0002563!3.07e-07!9;CL:0002251!3.07e-07!9;CL:0000066!5.29e-07!25|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.08e-12!15;UBERON:0000160!5.41e-12!43;UBERON:0005409!9.33e-10!59;UBERON:0001962!2.02e-09!2;UBERON:0001961!2.02e-09!2;UBERON:0001744!2.02e-09!2;UBERON:0001242!1.11e-07!13;UBERON:0000060!1.11e-07!13;UBERON:0001262!1.11e-07!13;UBERON:0004786!1.11e-07!13;UBERON:0004923!1.26e-07!24;UBERON:0003350!3.07e-07!9;UBERON:0004808!3.07e-07!9;UBERON:0001277!3.07e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.44e-15,31;UBERON:0005409,7.77e-10,47;UBERON:0001155,2.03e-07,2;UBERON:0000059,2.03e-07,2;UBERON:0001962,2.35e-07,2;UBERON:0001961,2.35e-07,2;UBERON:0001744,2.35e-07,2|phase1_expression=0,0.697950815278722,0,0.60492842261366,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.91763712426868,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.667741260153,0.528901133327089,0,0,0,0,0,0,5.21981967698963,0,0,0,0,6.29173586057955,0.648414149624083,6.37252074413975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:89023508..89023520,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:89023508..89023520,+ | |||
|id=chr1:89023508..89023520,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.87e-12!3;CL:0000627!1.87e-12!3;CL:0000682!1.87e-12!3;CL:0000239!8.58e-11!6;CL:0000677!8.58e-11!6;CL:0000212!8.58e-11!6;CL:0000584!8.58e-11!6;CL:0000075!2.84e-09!7;CL:0002563!3.07e-07!9;CL:0002251!3.07e-07!9;CL:0000066!5.29e-07!25 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.08e-12!15;UBERON:0000160!5.41e-12!43;UBERON:0005409!9.33e-10!59;UBERON:0001962!2.02e-09!2;UBERON:0001961!2.02e-09!2;UBERON:0001744!2.02e-09!2;UBERON:0001242!1.11e-07!13;UBERON:0000060!1.11e-07!13;UBERON:0001262!1.11e-07!13;UBERON:0004786!1.11e-07!13;UBERON:0004923!1.26e-07!24;UBERON:0003350!3.07e-07!9;UBERON:0004808!3.07e-07!9;UBERON:0001277!3.07e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.44e-15,31;UBERON:0005409,7.77e-10,47;UBERON:0001155,2.03e-07,2;UBERON:0000059,2.03e-07,2;UBERON:0001962,2.35e-07,2;UBERON:0001961,2.35e-07,2;UBERON:0001744,2.35e-07,2 | |||
|phase1_expression=0,0.697950815278722,0,0.60492842261366,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.91763712426868,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.667741260153,0.528901133327089,0,0,0,0,0,0,5.21981967698963,0,0,0,0,6.29173586057955,0.648414149624083,6.37252074413975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:89023508..89023520,+ | |||
}} | |||
Revision as of 21:09, 13 September 2013
| Short description: | p@chr1:89023508..89023520, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:89023508..89023520, + |
| Coexpression cluster: | MCL_coexpression_mm9:74 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 8.44e-15 | 31 |
| gastrointestinal system | 7.77e-10 | 47 |
| colon | 2.03e-07 | 2 |
| large intestine | 2.03e-07 | 2 |
| gut-associated lymphoid tissue | 2.35e-07 | 2 |
| mucosa-associated lymphoid tissue | 2.35e-07 | 2 |
| lymphoid tissue | 2.35e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
